RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 A0A0C4DFX4 3053 aa17.27■□□□□ 0.36
PSEN1-219ENST00000556951 SCN11AQ9UI33 1791 aa17.27■□□□□ 0.35
PSEN1-219ENST00000556951 AOC2O75106 756 aa17.26■□□□□ 0.35
PSEN1-219ENST00000556951 IL13P35225 146 aa17.26■□□□□ 0.35
PSEN1-219ENST00000556951 COL15A1P39059 1388 aa17.26■□□□□ 0.35
PSEN1-219ENST00000556951 H0YIN7 160 aa17.25■□□□□ 0.35
PSEN1-219ENST00000556951 AKAP4Q5JQC9 854 aa17.25■□□□□ 0.35
PSEN1-219ENST00000556951 MAP1SQ66K74 1059 aaPredicted RBP17.25■□□□□ 0.35
PSEN1-219ENST00000556951 PANK3Q9H999 370 aa17.25■□□□□ 0.35
PSEN1-219ENST00000556951 DDX21Q9NR30 783 aaKnown RBP eCLIP17.25■□□□□ 0.35
PSEN1-219ENST00000556951 RNMTO43148 476 aaKnown RBP17.24■□□□□ 0.35
PSEN1-219ENST00000556951 TRPM7Q96QT4 1865 aa17.24■□□□□ 0.35
PSEN1-219ENST00000556951 EIF5P55010 431 aaKnown RBP17.23■□□□□ 0.35
PSEN1-219ENST00000556951 C21orf2O43822 256 aa17.22■□□□□ 0.35
PSEN1-219ENST00000556951 BRPF1P55201 1214 aaPredicted RBP17.22■□□□□ 0.35
PSEN1-219ENST00000556951 DIEXFQ68CQ4 756 aaKnown RBP17.22■□□□□ 0.35
PSEN1-219ENST00000556951 BICDL1Q6ZP65 573 aa17.22■□□□□ 0.35
PSEN1-219ENST00000556951 POLR3GLQ9BT43 218 aa17.22■□□□□ 0.35
PSEN1-219ENST00000556951 LTBP3Q9NS15 1303 aa17.21■□□□□ 0.35
PSEN1-219ENST00000556951 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.35
PSEN1-219ENST00000556951 TBC1D9BQ66K14 1250 aa17.21■□□□□ 0.35
PSEN1-219ENST00000556951 PNMA8AQ86V59 439 aaPredicted RBP17.21■□□□□ 0.35
PSEN1-219ENST00000556951 VSIG10Q8N0Z9 540 aa17.21■□□□□ 0.35
PSEN1-219ENST00000556951 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.35
PSEN1-219ENST00000556951 HACL1Q9UJ83 578 aa17.21■□□□□ 0.35
PSEN1-219ENST00000556951 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
PSEN1-219ENST00000556951 MRC1P22897 1456 aa17.2■□□□□ 0.34
PSEN1-219ENST00000556951 EPHX2P34913 555 aa17.2■□□□□ 0.34
PSEN1-219ENST00000556951 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
PSEN1-219ENST00000556951 ZNF622Q969S3 477 aaKnown RBP eCLIP17.2■□□□□ 0.34
PSEN1-219ENST00000556951 BRIP1Q9BX63 1249 aa17.2■□□□□ 0.34
PSEN1-219ENST00000556951 SZT2Q5T011 3432 aa17.19■□□□□ 0.34
PSEN1-219ENST00000556951 PRR5LQ6MZQ0 368 aa17.19■□□□□ 0.34
PSEN1-219ENST00000556951 TLL2Q9Y6L7 1015 aa17.19■□□□□ 0.34
PSEN1-219ENST00000556951 SLC17A8Q8NDX2 589 aa17.18■□□□□ 0.34
PSEN1-219ENST00000556951 PDE6BP35913 854 aa17.17■□□□□ 0.34
PSEN1-219ENST00000556951 MTHFSDQ2M296 383 aaKnown RBP17.17■□□□□ 0.34
PSEN1-219ENST00000556951 TAOK3Q9H2K8 898 aa17.17■□□□□ 0.34
PSEN1-219ENST00000556951 PDZRN3Q9UPQ7 1066 aa17.17■□□□□ 0.34
PSEN1-219ENST00000556951 FMR1Q06787 632 aaKnown RBP eCLIP17.16■□□□□ 0.34
PSEN1-219ENST00000556951 CST9Q5W186 159 aa17.16■□□□□ 0.34
PSEN1-219ENST00000556951 SLX4Q8IY92 1834 aa17.15■□□□□ 0.34
PSEN1-219ENST00000556951 HMOX1P09601 288 aa17.15■□□□□ 0.34
PSEN1-219ENST00000556951 CIAPIN1Q6FI81 312 aa17.15■□□□□ 0.34
PSEN1-219ENST00000556951 C7orf43Q8WVR3 580 aa17.15■□□□□ 0.34
PSEN1-219ENST00000556951 TBC1D2BQ9UPU7 963 aa17.15■□□□□ 0.34
PSEN1-219ENST00000556951 COL11A2P13942 1736 aaPredicted RBP17.14■□□□□ 0.33
PSEN1-219ENST00000556951 A0A087WZG4 1122 aa17.14■□□□□ 0.33
PSEN1-219ENST00000556951 SRGNP10124 158 aa17.14■□□□□ 0.33
PSEN1-219ENST00000556951 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
PSEN1-219ENST00000556951 STARD3NLO95772 234 aa17.13■□□□□ 0.33
PSEN1-219ENST00000556951 STYK1Q6J9G0 422 aa17.13■□□□□ 0.33
PSEN1-219ENST00000556951 PITPNM2Q9BZ72 1349 aa17.13■□□□□ 0.33
PSEN1-219ENST00000556951 UBR2Q8IWV8 1755 aa17.12■□□□□ 0.33
PSEN1-219ENST00000556951 PRPF40BQ6NWY9 871 aaKnown RBP17.12■□□□□ 0.33
PSEN1-219ENST00000556951 CNKSR1Q969H4 720 aa17.12■□□□□ 0.33
PSEN1-219ENST00000556951 MKI67P46013 3256 aaKnown RBP17.12■□□□□ 0.33
PSEN1-219ENST00000556951 CAMTA2O94983 1202 aa17.11■□□□□ 0.33
PSEN1-219ENST00000556951 SAPCD2Q86UD0 394 aa17.11■□□□□ 0.33
PSEN1-219ENST00000556951 IL17REQ8NFR9 667 aa17.11■□□□□ 0.33
PSEN1-219ENST00000556951 A1BGP04217 495 aa17.1■□□□□ 0.33
PSEN1-219ENST00000556951 IL6STP40189 918 aaPredicted RBP17.1■□□□□ 0.33
PSEN1-219ENST00000556951 AMER1Q5JTC6 1135 aaPredicted RBP17.1■□□□□ 0.33
PSEN1-219ENST00000556951 HHIPL1Q96JK4 782 aa17.1■□□□□ 0.33
PSEN1-219ENST00000556951 HPS5Q9UPZ3 1129 aa17.1■□□□□ 0.33
PSEN1-219ENST00000556951 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
PSEN1-219ENST00000556951 ZNF541Q9H0D2 1346 aa17.1■□□□□ 0.33
PSEN1-219ENST00000556951 HEG1Q9ULI3 1381 aa17.1■□□□□ 0.33
PSEN1-219ENST00000556951 ZNF790Q6PG37 636 aa17.09■□□□□ 0.33
PSEN1-219ENST00000556951 MASTLQ96GX5 879 aa17.09■□□□□ 0.33
PSEN1-219ENST00000556951 SETDB2Q96T68 719 aa17.09■□□□□ 0.33
PSEN1-219ENST00000556951 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.32
PSEN1-219ENST00000556951 CTU1Q7Z7A3 348 aaKnown RBP17.08■□□□□ 0.32
PSEN1-219ENST00000556951 CNBD1Q8NA66 436 aa17.08■□□□□ 0.32
PSEN1-219ENST00000556951 TEX13AQ9BXU3 409 aaPredicted RBP17.08■□□□□ 0.32
PSEN1-219ENST00000556951 COL6A3P12111 3177 aa17.08■□□□□ 0.32
PSEN1-219ENST00000556951 CACNA1SQ13698 1873 aa17.07■□□□□ 0.32
PSEN1-219ENST00000556951 SCN7AQ01118 1682 aa17.07■□□□□ 0.32
PSEN1-219ENST00000556951 KLRG2A4D1S0 409 aaPredicted RBP17.07■□□□□ 0.32
PSEN1-219ENST00000556951 TRAF5O00463 557 aa17.07■□□□□ 0.32
PSEN1-219ENST00000556951 OLFM4Q6UX06 510 aa17.07■□□□□ 0.32
PSEN1-219ENST00000556951 TTC5Q8N0Z6 440 aa17.07■□□□□ 0.32
PSEN1-219ENST00000556951 KNSTRNQ9Y448 316 aa17.07■□□□□ 0.32
PSEN1-219ENST00000556951 KCNQ3O43525 872 aa17.06■□□□□ 0.32
PSEN1-219ENST00000556951 SOGA3Q5TF21 947 aa17.06■□□□□ 0.32
PSEN1-219ENST00000556951 SAGE1Q9NXZ1 904 aa17.06■□□□□ 0.32
PSEN1-219ENST00000556951 ZNF330Q9Y3S2 320 aaPredicted RBP17.06■□□□□ 0.32
PSEN1-219ENST00000556951 ZIC5Q96T25 663 aa17.05■□□□□ 0.32
PSEN1-219ENST00000556951 ZNF277Q9NRM2 450 aaPredicted RBP17.05■□□□□ 0.32
PSEN1-219ENST00000556951 KIF7Q2M1P5 1343 aa17.04■□□□□ 0.32
PSEN1-219ENST00000556951 FKBP4Q02790 459 aaKnown RBP eCLIP17.04■□□□□ 0.32
PSEN1-219ENST00000556951 NOGQ13253 232 aa17.04■□□□□ 0.32
PSEN1-219ENST00000556951 CCDC93Q567U6 631 aa17.04■□□□□ 0.32
PSEN1-219ENST00000556951 USP16Q9Y5T5 823 aa17.04■□□□□ 0.32
PSEN1-219ENST00000556951 ARFGEF2Q9Y6D5 1785 aa17.04■□□□□ 0.32
PSEN1-219ENST00000556951 FZD9O00144 591 aa17.03■□□□□ 0.32
PSEN1-219ENST00000556951 DIAPH1O60610 1272 aaKnown RBP17.03■□□□□ 0.32
PSEN1-219ENST00000556951 ST5P78524 1137 aa17.03■□□□□ 0.32
PSEN1-219ENST00000556951 DZIP3Q86Y13 1208 aaKnown RBP17.03■□□□□ 0.32
PSEN1-219ENST00000556951 AKAP11Q9UKA4 1901 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms