RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 NOP53Q9NZM5 478 aaKnown RBP6.96□□□□□ -1.3
FOXN3-213ENST00000556916 MARK1Q9P0L2 795 aa6.96□□□□□ -1.3
FOXN3-213ENST00000556916 PRR12Q9ULL5 1215 aa6.96□□□□□ -1.3
FOXN3-213ENST00000556916 K7ELQ4 463 aaPredicted RBP6.95□□□□□ -1.3
FOXN3-213ENST00000556916 EML1O00423 815 aa6.95□□□□□ -1.3
FOXN3-213ENST00000556916 NOS2P35228 1153 aa6.95□□□□□ -1.3
FOXN3-213ENST00000556916 LCE3BQ5TA77 95 aa6.95□□□□□ -1.3
FOXN3-213ENST00000556916 TRIM50Q86XT4 487 aa6.95□□□□□ -1.3
FOXN3-213ENST00000556916 CLDN10P78369 228 aa6.94□□□□□ -1.3
FOXN3-213ENST00000556916 LAMC2Q13753 1193 aa6.94□□□□□ -1.3
FOXN3-213ENST00000556916 PLEKHM2Q8IWE5 1019 aa6.94□□□□□ -1.3
FOXN3-213ENST00000556916 RHPN1Q8TCX5 695 aa6.94□□□□□ -1.3
FOXN3-213ENST00000556916 SERTM1A2A2V5 107 aa6.93□□□□□ -1.3
FOXN3-213ENST00000556916 C1QTNF9BB2RNN3 333 aa6.93□□□□□ -1.3
FOXN3-213ENST00000556916 CHRNA4P43681 627 aa6.93□□□□□ -1.3
FOXN3-213ENST00000556916 ATP1A2P50993 1020 aa6.93□□□□□ -1.3
FOXN3-213ENST00000556916 PSMA6P60900 246 aaKnown RBP6.93□□□□□ -1.3
FOXN3-213ENST00000556916 FLIIQ13045 1269 aa6.93□□□□□ -1.3
FOXN3-213ENST00000556916 CD163Q86VB7 1156 aa6.93□□□□□ -1.3
FOXN3-213ENST00000556916 TRIM11Q96F44 468 aa6.93□□□□□ -1.3
FOXN3-213ENST00000556916 KRTAP9-9Q9BYP9 154 aa6.93□□□□□ -1.3
FOXN3-213ENST00000556916 KRTAP9-4Q9BYQ2 154 aa6.93□□□□□ -1.3
FOXN3-213ENST00000556916 TSPAN10Q9H1Z9 355 aaPredicted RBP6.93□□□□□ -1.3
FOXN3-213ENST00000556916 FURINP09958 794 aa6.92□□□□□ -1.3
FOXN3-213ENST00000556916 CCDC102BQ68D86 513 aa6.92□□□□□ -1.3
FOXN3-213ENST00000556916 SYT9Q86SS6 491 aa6.92□□□□□ -1.3
FOXN3-213ENST00000556916 HSH2DQ96JZ2 352 aa6.92□□□□□ -1.3
FOXN3-213ENST00000556916 GTF3C3Q9Y5Q9 886 aa6.92□□□□□ -1.3
FOXN3-213ENST00000556916 GPC6Q9Y625 555 aaPredicted RBP6.92□□□□□ -1.3
FOXN3-213ENST00000556916 ELOA3CA0A087WX78 387 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-213ENST00000556916 ELOA3DA6NLF2 546 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-213ENST00000556916 ATP9BO43861 1147 aa6.91□□□□□ -1.3
FOXN3-213ENST00000556916 SFSWAPQ12872 951 aaKnown RBP6.91□□□□□ -1.3
FOXN3-213ENST00000556916 ELOA3BQ3SY89 546 aa6.91□□□□□ -1.3
FOXN3-213ENST00000556916 OGFOD1Q8N543 542 aa6.91□□□□□ -1.3
FOXN3-213ENST00000556916 ELOA3Q8NG57 546 aa6.91□□□□□ -1.3
FOXN3-213ENST00000556916 ZNF594Q96JF6 807 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-213ENST00000556916 NEUROD4Q9HD90 331 aa6.91□□□□□ -1.3
FOXN3-213ENST00000556916 ZBTB7BO15156 539 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-213ENST00000556916 HDGFL1Q5TGJ6 251 aa6.9□□□□□ -1.3
FOXN3-213ENST00000556916 TSEN2Q8NCE0 465 aaKnown RBP6.9□□□□□ -1.3
FOXN3-213ENST00000556916 CLUAP1Q96AJ1 413 aa6.9□□□□□ -1.3
FOXN3-213ENST00000556916 SLC30A3Q99726 388 aa6.9□□□□□ -1.3
FOXN3-213ENST00000556916 MDFIQ99750 246 aa6.9□□□□□ -1.3
FOXN3-213ENST00000556916 CHMP3Q9Y3E7 222 aa6.9□□□□□ -1.3
FOXN3-213ENST00000556916 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
FOXN3-213ENST00000556916 SIN3BO75182 1162 aa6.89□□□□□ -1.31
FOXN3-213ENST00000556916 RAB44Q7Z6P3 723 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-213ENST00000556916 SIX5Q8N196 739 aa6.89□□□□□ -1.31
FOXN3-213ENST00000556916 LARGE2Q8N3Y3 721 aa6.89□□□□□ -1.31
FOXN3-213ENST00000556916 C7orf43Q8WVR3 580 aa6.89□□□□□ -1.31
FOXN3-213ENST00000556916 PLVAPQ9BX97 442 aa6.89□□□□□ -1.31
FOXN3-213ENST00000556916 PHACTR1Q9C0D0 580 aa6.89□□□□□ -1.31
FOXN3-213ENST00000556916 MKRN1Q9UHC7 482 aaKnown RBP6.89□□□□□ -1.31
FOXN3-213ENST00000556916 SFI1A8K8P3 1242 aa6.88□□□□□ -1.31
FOXN3-213ENST00000556916 PPP1R12BO60237 982 aaPredicted RBP6.88□□□□□ -1.31
FOXN3-213ENST00000556916 HIRAP54198 1017 aaPredicted RBP6.88□□□□□ -1.31
FOXN3-213ENST00000556916 TYRO3Q06418 890 aa6.88□□□□□ -1.31
FOXN3-213ENST00000556916 SPEM2Q0P670 501 aa6.88□□□□□ -1.31
FOXN3-213ENST00000556916 CEP63Q96MT8 703 aa6.88□□□□□ -1.31
FOXN3-213ENST00000556916 BRD7Q9NPI1 651 aa6.88□□□□□ -1.31
FOXN3-213ENST00000556916 HCN4Q9Y3Q4 1203 aa6.88□□□□□ -1.31
FOXN3-213ENST00000556916 PALM3A6NDB9 673 aaPredicted RBP6.87□□□□□ -1.31
FOXN3-213ENST00000556916 M0R2N6 131 aa6.87□□□□□ -1.31
FOXN3-213ENST00000556916 SPATA31C1P0DKV0 1188 aa6.87□□□□□ -1.31
FOXN3-213ENST00000556916 ALAS2P22557 587 aa6.87□□□□□ -1.31
FOXN3-213ENST00000556916 C1orf53Q5VUE5 145 aa6.87□□□□□ -1.31
FOXN3-213ENST00000556916 POTEAQ6S8J7 498 aa6.87□□□□□ -1.31
FOXN3-213ENST00000556916 ADARB2-AS1A8MUL3 147 aa6.86□□□□□ -1.31
FOXN3-213ENST00000556916 M0R082 166 aa6.86□□□□□ -1.31
FOXN3-213ENST00000556916 ALBP02768 609 aa6.86□□□□□ -1.31
FOXN3-213ENST00000556916 ADH7P40394 386 aa6.86□□□□□ -1.31
FOXN3-213ENST00000556916 ZNF280CQ8ND82 737 aa6.86□□□□□ -1.31
FOXN3-213ENST00000556916 ZNF417Q8TAU3 575 aa6.86□□□□□ -1.31
FOXN3-213ENST00000556916 GLMNQ92990 594 aa6.86□□□□□ -1.31
FOXN3-213ENST00000556916 TNFRSF25Q93038 417 aa6.86□□□□□ -1.31
FOXN3-213ENST00000556916 ZNF587Q96SQ5 575 aaPredicted RBP6.86□□□□□ -1.31
FOXN3-213ENST00000556916 RBM19Q9Y4C8 960 aaKnown RBP6.86□□□□□ -1.31
FOXN3-213ENST00000556916 C21orf2O43822 256 aa6.85□□□□□ -1.31
FOXN3-213ENST00000556916 DKK1O94907 266 aa6.85□□□□□ -1.31
FOXN3-213ENST00000556916 NEUROD1Q13562 356 aa6.85□□□□□ -1.31
FOXN3-213ENST00000556916 PROSER2Q86WR7 435 aaPredicted RBP6.85□□□□□ -1.31
FOXN3-213ENST00000556916 SUSD3Q96L08 255 aa6.85□□□□□ -1.31
FOXN3-213ENST00000556916 KRTAP4-12Q9BQ66 201 aa6.85□□□□□ -1.31
FOXN3-213ENST00000556916 ANKIB1Q9P2G1 1089 aa6.85□□□□□ -1.31
FOXN3-213ENST00000556916 SPDYE3A6NKU9 549 aa6.84□□□□□ -1.31
FOXN3-213ENST00000556916 FAM229AH3BQW9 127 aa6.84□□□□□ -1.31
FOXN3-213ENST00000556916 DOC2BQ14184 412 aa6.84□□□□□ -1.31
FOXN3-213ENST00000556916 PRRT3Q5FWE3 981 aa6.84□□□□□ -1.31
FOXN3-213ENST00000556916 C8orf86Q6ZUL3 223 aa6.84□□□□□ -1.31
FOXN3-213ENST00000556916 ALDH16A1Q8IZ83 802 aa6.84□□□□□ -1.31
FOXN3-213ENST00000556916 KCNH4Q9UQ05 1017 aa6.84□□□□□ -1.31
FOXN3-213ENST00000556916 STARD13Q9Y3M8 1113 aa6.84□□□□□ -1.31
FOXN3-213ENST00000556916 MAFBQ9Y5Q3 323 aaPredicted RBP6.84□□□□□ -1.31
FOXN3-213ENST00000556916 RASA1P20936 1047 aa6.83□□□□□ -1.32
FOXN3-213ENST00000556916 KCNQ4P56696 695 aa6.83□□□□□ -1.32
FOXN3-213ENST00000556916 CHMP7Q8WUX9 453 aaPredicted RBP6.83□□□□□ -1.32
FOXN3-213ENST00000556916 SCG3Q8WXD2 468 aaKnown RBP6.83□□□□□ -1.32
FOXN3-213ENST00000556916 NGLY1Q96IV0 654 aa6.83□□□□□ -1.32
FOXN3-213ENST00000556916 GATA4P43694 442 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms