RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 XAGE3Q8WTP9 111 aa22.45■■□□□ 1.18
PSEN1-218ENST00000556864 ERVV-1B6SEH8 477 aa22.44■■□□□ 1.18
PSEN1-218ENST00000556864 DDX58O95786 925 aaKnown RBP22.44■■□□□ 1.18
PSEN1-218ENST00000556864 COPS6Q7L5N1 327 aa22.44■■□□□ 1.18
PSEN1-218ENST00000556864 AIMP1Q12904 312 aaKnown RBP22.43■■□□□ 1.18
PSEN1-218ENST00000556864 TTLL7Q6ZT98 887 aa22.43■■□□□ 1.18
PSEN1-218ENST00000556864 ATP10DQ9P241 1426 aa22.42■■□□□ 1.18
PSEN1-218ENST00000556864 TCERG1O14776 1098 aaKnown RBP22.42■■□□□ 1.18
PSEN1-218ENST00000556864 SLC4A2P04920 1241 aa22.42■■□□□ 1.18
PSEN1-218ENST00000556864 ALDH1L2Q3SY69 923 aa22.42■■□□□ 1.18
PSEN1-218ENST00000556864 CLEC4GQ6UXB4 293 aa22.42■■□□□ 1.18
PSEN1-218ENST00000556864 ZBTB3Q9H5J0 574 aa22.42■■□□□ 1.18
PSEN1-218ENST00000556864 ATF5Q9Y2D1 282 aaPredicted RBP22.42■■□□□ 1.18
PSEN1-218ENST00000556864 FKBP8Q14318 412 aa22.41■■□□□ 1.18
PSEN1-218ENST00000556864 HSP90AB3PQ58FF7 597 aa22.4■■□□□ 1.18
PSEN1-218ENST00000556864 PLBD2Q8NHP8 589 aa22.4■■□□□ 1.18
PSEN1-218ENST00000556864 BCL2L12Q9HB09 334 aa22.4■■□□□ 1.18
PSEN1-218ENST00000556864 SMC4Q9NTJ3 1288 aa22.4■■□□□ 1.18
PSEN1-218ENST00000556864 ARFGEF2Q9Y6D5 1785 aa22.4■■□□□ 1.18
PSEN1-218ENST00000556864 CARMIL3Q8ND23 1372 aa22.39■■□□□ 1.18
PSEN1-218ENST00000556864 MMP10P09238 476 aa22.39■■□□□ 1.17
PSEN1-218ENST00000556864 FLIIQ13045 1269 aa22.39■■□□□ 1.17
PSEN1-218ENST00000556864 PHAXQ9H814 394 aaKnown RBP22.39■■□□□ 1.17
PSEN1-218ENST00000556864 CACNA1FO60840 1977 aa22.39■■□□□ 1.17
PSEN1-218ENST00000556864 ANKRD36CQ5JPF3 1778 aa22.38■■□□□ 1.17
PSEN1-218ENST00000556864 GIGYF2Q6Y7W6 1299 aaKnown RBP22.38■■□□□ 1.17
PSEN1-218ENST00000556864 ANKRD13DQ6ZTN6 518 aa22.38■■□□□ 1.17
PSEN1-218ENST00000556864 FKBP5Q13451 457 aaPredicted RBP22.37■■□□□ 1.17
PSEN1-218ENST00000556864 SSH1Q8WYL5 1049 aa22.37■■□□□ 1.17
PSEN1-218ENST00000556864 PARP3Q9Y6F1 533 aa22.37■■□□□ 1.17
PSEN1-218ENST00000556864 NFIXQ14938 502 aa22.36■■□□□ 1.17
PSEN1-218ENST00000556864 RIC3Q7Z5B4 369 aa22.36■■□□□ 1.17
PSEN1-218ENST00000556864 SGIP1Q9BQI5 828 aa22.36■■□□□ 1.17
PSEN1-218ENST00000556864 KIF16BQ96L93 1317 aa22.35■■□□□ 1.17
PSEN1-218ENST00000556864 PTGER2P43116 358 aa22.35■■□□□ 1.17
PSEN1-218ENST00000556864 HLFQ16534 295 aa22.35■■□□□ 1.17
PSEN1-218ENST00000556864 TBC1D9BQ66K14 1250 aa22.35■■□□□ 1.17
PSEN1-218ENST00000556864 BICDL1Q6ZP65 573 aa22.35■■□□□ 1.17
PSEN1-218ENST00000556864 MRPL50Q8N5N7 158 aaKnown RBP22.35■■□□□ 1.17
PSEN1-218ENST00000556864 SETDB2Q96T68 719 aa22.35■■□□□ 1.17
PSEN1-218ENST00000556864 PPP1R1BQ9UD71 204 aaPredicted RBP22.35■■□□□ 1.17
PSEN1-218ENST00000556864 IBTKQ9P2D0 1353 aaPredicted RBP22.35■■□□□ 1.17
PSEN1-218ENST00000556864 PTPRCP08575 1304 aa22.34■■□□□ 1.17
PSEN1-218ENST00000556864 NUP98P52948 1817 aa22.34■■□□□ 1.17
PSEN1-218ENST00000556864 TM4SF1P30408 202 aa22.34■■□□□ 1.17
PSEN1-218ENST00000556864 RARSP54136 660 aaKnown RBP22.34■■□□□ 1.17
PSEN1-218ENST00000556864 G2E3Q7L622 706 aa22.34■■□□□ 1.17
PSEN1-218ENST00000556864 BCL2L13Q9BXK5 485 aa22.34■■□□□ 1.17
PSEN1-218ENST00000556864 NIP7Q9Y221 180 aaKnown RBP eCLIP22.34■■□□□ 1.17
PSEN1-218ENST00000556864 ADCY9O60503 1353 aa22.34■■□□□ 1.17
PSEN1-218ENST00000556864 DDR1Q08345 913 aa22.33■■□□□ 1.17
PSEN1-218ENST00000556864 PARP10Q53GL7 1025 aa22.33■■□□□ 1.17
PSEN1-218ENST00000556864 KSR2Q6VAB6 950 aa22.33■■□□□ 1.17
PSEN1-218ENST00000556864 NRXN2Q9P2S2 1712 aa22.32■■□□□ 1.16
PSEN1-218ENST00000556864 POLRMTO00411 1230 aaKnown RBP22.32■■□□□ 1.16
PSEN1-218ENST00000556864 NEXNQ0ZGT2 675 aa22.32■■□□□ 1.16
PSEN1-218ENST00000556864 C10orf71Q711Q0 1435 aa22.31■■□□□ 1.16
PSEN1-218ENST00000556864 PXDNLA1KZ92 1463 aa22.31■■□□□ 1.16
PSEN1-218ENST00000556864 NPHP1O15259 732 aa22.31■■□□□ 1.16
PSEN1-218ENST00000556864 BRPF1P55201 1214 aaPredicted RBP22.31■■□□□ 1.16
PSEN1-218ENST00000556864 TCIRG1Q13488 830 aa22.31■■□□□ 1.16
PSEN1-218ENST00000556864 MAP3K2Q9Y2U5 619 aa22.31■■□□□ 1.16
PSEN1-218ENST00000556864 PI4KAP2A4QPH2 592 aa22.3■■□□□ 1.16
PSEN1-218ENST00000556864 ZNF34Q8IZ26 560 aa22.3■■□□□ 1.16
PSEN1-218ENST00000556864 PI4KAP1Q8N8J0 262 aa22.3■■□□□ 1.16
PSEN1-218ENST00000556864 NYXQ9GZU5 481 aa22.3■■□□□ 1.16
PSEN1-218ENST00000556864 RNF123Q5XPI4 1314 aa22.3■■□□□ 1.16
PSEN1-218ENST00000556864 SERPINB2P05120 415 aa22.29■■□□□ 1.16
PSEN1-218ENST00000556864 GPTP24298 496 aa22.29■■□□□ 1.16
PSEN1-218ENST00000556864 NBPF5PQ86XG9 351 aaPredicted RBP22.29■■□□□ 1.16
PSEN1-218ENST00000556864 CNBD1Q8NA66 436 aa22.29■■□□□ 1.16
PSEN1-218ENST00000556864 DNAAF4Q8WXU2 420 aa22.29■■□□□ 1.16
PSEN1-218ENST00000556864 METTL22Q9BUU2 404 aaPredicted RBP22.29■■□□□ 1.16
PSEN1-218ENST00000556864 UBN2Q6ZU65 1347 aa22.29■■□□□ 1.16
PSEN1-218ENST00000556864 PPP1R42Q7Z4L9 355 aa22.28■■□□□ 1.16
PSEN1-218ENST00000556864 MYD88Q99836 296 aa22.28■■□□□ 1.16
PSEN1-218ENST00000556864 ST5P78524 1137 aa22.27■■□□□ 1.16
PSEN1-218ENST00000556864 ISCA1Q9BUE6 129 aa22.27■■□□□ 1.16
PSEN1-218ENST00000556864 API5Q9BZZ5 524 aaKnown RBP22.27■■□□□ 1.16
PSEN1-218ENST00000556864 AFDNP55196 1824 aaKnown RBP22.26■■□□□ 1.15
PSEN1-218ENST00000556864 IPO8O15397 1037 aaKnown RBP22.25■■□□□ 1.15
PSEN1-218ENST00000556864 TRIM28Q13263 835 aaKnown RBP22.25■■□□□ 1.15
PSEN1-218ENST00000556864 TPTE2Q6XPS3 522 aa22.25■■□□□ 1.15
PSEN1-218ENST00000556864 NLRP10Q86W26 655 aa22.25■■□□□ 1.15
PSEN1-218ENST00000556864 KLHL34Q8N239 644 aa22.25■■□□□ 1.15
PSEN1-218ENST00000556864 RCAN3Q9UKA8 241 aa22.25■■□□□ 1.15
PSEN1-218ENST00000556864 RIC1Q4ADV7 1423 aa22.24■■□□□ 1.15
PSEN1-218ENST00000556864 ATP5J2-PTCD1G3V325 749 aa22.24■■□□□ 1.15
PSEN1-218ENST00000556864 GTF2E1P29083 439 aaPredicted RBP22.24■■□□□ 1.15
PSEN1-218ENST00000556864 PRR5LQ6MZQ0 368 aa22.24■■□□□ 1.15
PSEN1-218ENST00000556864 CCDC191Q8NCU4 936 aa22.24■■□□□ 1.15
PSEN1-218ENST00000556864 UTP14AQ9BVJ6 771 aaKnown RBP22.24■■□□□ 1.15
PSEN1-218ENST00000556864 CD2APQ9Y5K6 639 aa22.24■■□□□ 1.15
PSEN1-218ENST00000556864 KIF13BQ9NQT8 1826 aa22.24■■□□□ 1.15
PSEN1-218ENST00000556864 N4BP2Q86UW6 1770 aaPredicted RBP22.23■■□□□ 1.15
PSEN1-218ENST00000556864 FAM177BA6PVY3 158 aa22.23■■□□□ 1.15
PSEN1-218ENST00000556864 NTSR2O95665 410 aa22.23■■□□□ 1.15
PSEN1-218ENST00000556864 SUSD4Q5VX71 490 aa22.23■■□□□ 1.15
PSEN1-218ENST00000556864 LINS1Q8NG48 757 aa22.23■■□□□ 1.15
PSEN1-218ENST00000556864 ARHGAP45Q92619 1136 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms