RNA–Protein interactions for RNA: ENST00000556853.5

CNOT10-219, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 4

Gene CNOT10, Length 551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-219ENST00000556853 PRR5LQ6MZQ0 368 aa17.12■□□□□ 0.33
CNOT10-219ENST00000556853 CCDC24Q8N4L8 307 aa17.12■□□□□ 0.33
CNOT10-219ENST00000556853 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
CNOT10-219ENST00000556853 ZNF277Q9NRM2 450 aaPredicted RBP17.12■□□□□ 0.33
CNOT10-219ENST00000556853 WASHC2AQ641Q2 1341 aa17.12■□□□□ 0.33
CNOT10-219ENST00000556853 ANKRD26Q9UPS8 1709 aa17.11■□□□□ 0.33
CNOT10-219ENST00000556853 SRGNP10124 158 aa17.11■□□□□ 0.33
CNOT10-219ENST00000556853 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
CNOT10-219ENST00000556853 CCDC93Q567U6 631 aa17.11■□□□□ 0.33
CNOT10-219ENST00000556853 KIF20BQ96Q89 1820 aa17.1■□□□□ 0.33
CNOT10-219ENST00000556853 PPM1GO15355 546 aaPredicted RBP17.1■□□□□ 0.33
CNOT10-219ENST00000556853 FXR1P51114 621 aaKnown RBP eCLIP17.1■□□□□ 0.33
CNOT10-219ENST00000556853 CARD11Q9BXL7 1154 aa17.1■□□□□ 0.33
CNOT10-219ENST00000556853 ZBTB1Q9Y2K1 713 aa17.1■□□□□ 0.33
CNOT10-219ENST00000556853 TBC1D9BQ66K14 1250 aa17.09■□□□□ 0.33
CNOT10-219ENST00000556853 MASTLQ96GX5 879 aa17.09■□□□□ 0.33
CNOT10-219ENST00000556853 ZIC5Q96T25 663 aa17.09■□□□□ 0.33
CNOT10-219ENST00000556853 NOGQ13253 232 aa17.08■□□□□ 0.32
CNOT10-219ENST00000556853 ST20-MTHFSA0A0A6YYL1 179 aa17.07■□□□□ 0.32
CNOT10-219ENST00000556853 DLL1O00548 723 aa17.07■□□□□ 0.32
CNOT10-219ENST00000556853 CELF2O95319 508 aaKnown RBP17.07■□□□□ 0.32
CNOT10-219ENST00000556853 LMOD1P29536 600 aaPredicted RBP17.07■□□□□ 0.32
CNOT10-219ENST00000556853 EPS15P42566 896 aa17.07■□□□□ 0.32
CNOT10-219ENST00000556853 MTHFSP49914 203 aa17.07■□□□□ 0.32
CNOT10-219ENST00000556853 USP50Q70EL3 339 aaPredicted RBP17.07■□□□□ 0.32
CNOT10-219ENST00000556853 SAGE1Q9NXZ1 904 aa17.07■□□□□ 0.32
CNOT10-219ENST00000556853 IARSP41252 1262 aaKnown RBP17.06■□□□□ 0.32
CNOT10-219ENST00000556853 SCNN1DP51172 638 aa17.06■□□□□ 0.32
CNOT10-219ENST00000556853 PLEKHO1Q53GL0 409 aaPredicted RBP17.06■□□□□ 0.32
CNOT10-219ENST00000556853 ZNF530Q6P9A1 599 aaPredicted RBP17.06■□□□□ 0.32
CNOT10-219ENST00000556853 CTU1Q7Z7A3 348 aaKnown RBP17.06■□□□□ 0.32
CNOT10-219ENST00000556853 HPS5Q9UPZ3 1129 aa17.06■□□□□ 0.32
CNOT10-219ENST00000556853 TESK2Q96S53 571 aa17.04■□□□□ 0.32
CNOT10-219ENST00000556853 GJA3Q9Y6H8 435 aa17.04■□□□□ 0.32
CNOT10-219ENST00000556853 BCORQ6W2J9 1755 aa17.04■□□□□ 0.32
CNOT10-219ENST00000556853 RTKN2Q8IZC4 609 aa17.03■□□□□ 0.32
CNOT10-219ENST00000556853 EIF4A2Q14240 407 aaKnown RBP17.02■□□□□ 0.32
CNOT10-219ENST00000556853 AMOTQ4VCS5 1084 aa17.02■□□□□ 0.32
CNOT10-219ENST00000556853 OLFM4Q6UX06 510 aa17.02■□□□□ 0.32
CNOT10-219ENST00000556853 SYNE4Q8N205 404 aa17.02■□□□□ 0.32
CNOT10-219ENST00000556853 CNBD1Q8NA66 436 aa17.02■□□□□ 0.32
CNOT10-219ENST00000556853 CANXP27824 592 aaKnown RBP17.01■□□□□ 0.31
CNOT10-219ENST00000556853 EIF5P55010 431 aaKnown RBP17.01■□□□□ 0.31
CNOT10-219ENST00000556853 EIF6P56537 245 aaKnown RBP17.01■□□□□ 0.31
CNOT10-219ENST00000556853 AKAP4Q5JQC9 854 aa17.01■□□□□ 0.31
CNOT10-219ENST00000556853 JDP2Q8WYK2 163 aa17.01■□□□□ 0.31
CNOT10-219ENST00000556853 SCN7AQ01118 1682 aa17.01■□□□□ 0.31
CNOT10-219ENST00000556853 A0A087WZG4 1122 aa17■□□□□ 0.31
CNOT10-219ENST00000556853 ST5P78524 1137 aa17■□□□□ 0.31
CNOT10-219ENST00000556853 C1orf141Q5JVX7 400 aa17■□□□□ 0.31
CNOT10-219ENST00000556853 RNF186Q9NXI6 227 aa17■□□□□ 0.31
CNOT10-219ENST00000556853 TRPA1O75762 1119 aa16.99■□□□□ 0.31
CNOT10-219ENST00000556853 GLIS2Q9BZE0 524 aaPredicted RBP16.99■□□□□ 0.31
CNOT10-219ENST00000556853 COL4A5P29400 1685 aa16.99■□□□□ 0.31
CNOT10-219ENST00000556853 SCN11AQ9UI33 1791 aa16.99■□□□□ 0.31
CNOT10-219ENST00000556853 FAM155AB1AL88 458 aaPredicted RBP16.98■□□□□ 0.31
CNOT10-219ENST00000556853 NPR1P16066 1061 aa16.98■□□□□ 0.31
CNOT10-219ENST00000556853 SIN3AQ96ST3 1273 aa16.98■□□□□ 0.31
CNOT10-219ENST00000556853 ZNF408Q9H9D4 720 aa16.98■□□□□ 0.31
CNOT10-219ENST00000556853 POLKQ9UBT6 870 aa16.98■□□□□ 0.31
CNOT10-219ENST00000556853 NPHP1O15259 732 aa16.97■□□□□ 0.31
CNOT10-219ENST00000556853 PKN2Q16513 984 aaKnown RBP16.97■□□□□ 0.31
CNOT10-219ENST00000556853 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
CNOT10-219ENST00000556853 PSMD1Q99460 953 aa16.97■□□□□ 0.31
CNOT10-219ENST00000556853 SNED1Q8TER0 1413 aa16.96■□□□□ 0.31
CNOT10-219ENST00000556853 AKAP11Q9UKA4 1901 aa16.96■□□□□ 0.31
CNOT10-219ENST00000556853 SLC39A6Q13433 755 aa16.96■□□□□ 0.31
CNOT10-219ENST00000556853 VSIG10Q8N0Z9 540 aa16.96■□□□□ 0.31
CNOT10-219ENST00000556853 ADARB2Q9NS39 739 aaKnown RBP16.96■□□□□ 0.31
CNOT10-219ENST00000556853 PGAP2Q9UHJ9 254 aa16.96■□□□□ 0.31
CNOT10-219ENST00000556853 KLRG2A4D1S0 409 aaPredicted RBP16.95■□□□□ 0.3
CNOT10-219ENST00000556853 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
CNOT10-219ENST00000556853 HUNKP57058 714 aa16.95■□□□□ 0.3
CNOT10-219ENST00000556853 KIF23Q02241 960 aaPredicted RBP16.95■□□□□ 0.3
CNOT10-219ENST00000556853 SLC52A2Q9HAB3 445 aa16.95■□□□□ 0.3
CNOT10-219ENST00000556853 TBC1D2BQ9UPU7 963 aa16.95■□□□□ 0.3
CNOT10-219ENST00000556853 GPRC5DQ9NZD1 345 aa16.94■□□□□ 0.3
CNOT10-219ENST00000556853 RGMBQ6NW40 437 aa16.93■□□□□ 0.3
CNOT10-219ENST00000556853 SLC17A8Q8NDX2 589 aa16.93■□□□□ 0.3
CNOT10-219ENST00000556853 CARD14Q9BXL6 1004 aa16.93■□□□□ 0.3
CNOT10-219ENST00000556853 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
CNOT10-219ENST00000556853 CCDC102AQ96A19 550 aa16.91■□□□□ 0.3
CNOT10-219ENST00000556853 CAMTA2O94983 1202 aa16.9■□□□□ 0.3
CNOT10-219ENST00000556853 STARD3NLO95772 234 aa16.9■□□□□ 0.3
CNOT10-219ENST00000556853 NEUROD1Q13562 356 aa16.9■□□□□ 0.3
CNOT10-219ENST00000556853 ZC3H15Q8WU90 426 aaKnown RBP16.9■□□□□ 0.3
CNOT10-219ENST00000556853 CSRNP1Q96S65 589 aa16.9■□□□□ 0.3
CNOT10-219ENST00000556853 LGR6Q9HBX8 967 aa16.9■□□□□ 0.3
CNOT10-219ENST00000556853 MRC1P22897 1456 aa16.9■□□□□ 0.3
CNOT10-219ENST00000556853 ALDH1B1P30837 517 aa16.89■□□□□ 0.29
CNOT10-219ENST00000556853 COLQQ9Y215 455 aaPredicted RBP16.89■□□□□ 0.29
CNOT10-219ENST00000556853 UBR2Q8IWV8 1755 aa16.88■□□□□ 0.29
CNOT10-219ENST00000556853 NBPF5PQ86XG9 351 aaPredicted RBP16.88■□□□□ 0.29
CNOT10-219ENST00000556853 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
CNOT10-219ENST00000556853 LARGE2Q8N3Y3 721 aa16.88■□□□□ 0.29
CNOT10-219ENST00000556853 HDAC9Q9UKV0 1011 aa16.88■□□□□ 0.29
CNOT10-219ENST00000556853 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
CNOT10-219ENST00000556853 IL6STP40189 918 aaPredicted RBP16.87■□□□□ 0.29
CNOT10-219ENST00000556853 HIRAP54198 1017 aaPredicted RBP16.87■□□□□ 0.29
CNOT10-219ENST00000556853 FBXO46Q6PJ61 603 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms