RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 STARD3NLO95772 234 aa9.58□□□□□ -0.88
PCNX1-213ENST00000556846 NEFMP07197 916 aa9.58□□□□□ -0.88
PCNX1-213ENST00000556846 CYP19A1P11511 503 aaPredicted RBP9.58□□□□□ -0.88
PCNX1-213ENST00000556846 CANXP27824 592 aaKnown RBP9.58□□□□□ -0.88
PCNX1-213ENST00000556846 USPL1Q5W0Q7 1092 aa9.58□□□□□ -0.88
PCNX1-213ENST00000556846 NPM2Q86SE8 214 aaKnown RBP9.58□□□□□ -0.88
PCNX1-213ENST00000556846 IL17REQ8NFR9 667 aa9.58□□□□□ -0.88
PCNX1-213ENST00000556846 RTF1Q92541 710 aaKnown RBP9.58□□□□□ -0.88
PCNX1-213ENST00000556846 PHACTR3Q96KR7 559 aa9.58□□□□□ -0.88
PCNX1-213ENST00000556846 USP42Q9H9J4 1324 aaKnown RBP9.57□□□□□ -0.88
PCNX1-213ENST00000556846 COL24A1Q17RW2 1714 aa9.57□□□□□ -0.88
PCNX1-213ENST00000556846 FCHSD2O94868 740 aa9.57□□□□□ -0.88
PCNX1-213ENST00000556846 DPEP1P16444 411 aa9.57□□□□□ -0.88
PCNX1-213ENST00000556846 C1QTNF8P60827 252 aa9.57□□□□□ -0.88
PCNX1-213ENST00000556846 ZNF790Q6PG37 636 aa9.57□□□□□ -0.88
PCNX1-213ENST00000556846 ARHGAP27Q6ZUM4 889 aa9.57□□□□□ -0.88
PCNX1-213ENST00000556846 VSIG10Q8N0Z9 540 aa9.57□□□□□ -0.88
PCNX1-213ENST00000556846 TEX13AQ9BXU3 409 aaPredicted RBP9.57□□□□□ -0.88
PCNX1-213ENST00000556846 ZNF330Q9Y3S2 320 aaPredicted RBP9.57□□□□□ -0.88
PCNX1-213ENST00000556846 UBR3Q6ZT12 1888 aa9.56□□□□□ -0.88
PCNX1-213ENST00000556846 A0A087WZG4 1122 aa9.56□□□□□ -0.88
PCNX1-213ENST00000556846 BTBD11A6QL63 1104 aa9.56□□□□□ -0.88
PCNX1-213ENST00000556846 PDAP1Q13442 181 aaKnown RBP9.56□□□□□ -0.88
PCNX1-213ENST00000556846 ZNF526Q8TF50 670 aaPredicted RBP9.56□□□□□ -0.88
PCNX1-213ENST00000556846 ZNF496Q96IT1 587 aaPredicted RBP9.56□□□□□ -0.88
PCNX1-213ENST00000556846 RSPH6AQ9H0K4 717 aa9.56□□□□□ -0.88
PCNX1-213ENST00000556846 GPBP1L1Q9HC44 474 aaPredicted RBP9.56□□□□□ -0.88
PCNX1-213ENST00000556846 ZBTB1Q9Y2K1 713 aa9.56□□□□□ -0.88
PCNX1-213ENST00000556846 BOLA1Q9Y3E2 137 aa9.56□□□□□ -0.88
PCNX1-213ENST00000556846 SOS1Q07889 1333 aaPredicted RBP9.56□□□□□ -0.88
PCNX1-213ENST00000556846 SENP3-EIF4A1A0A087X0R7 540 aa9.55□□□□□ -0.88
PCNX1-213ENST00000556846 BICDL1Q6ZP65 573 aa9.55□□□□□ -0.88
PCNX1-213ENST00000556846 FMNL2Q96PY5 1086 aa9.55□□□□□ -0.88
PCNX1-213ENST00000556846 PIM2Q9P1W9 311 aa9.55□□□□□ -0.88
PCNX1-213ENST00000556846 NARFQ9UHQ1 456 aa9.55□□□□□ -0.88
PCNX1-213ENST00000556846 COL3A1P02461 1466 aaPredicted RBP9.54□□□□□ -0.88
PCNX1-213ENST00000556846 TM4SF1P30408 202 aa9.54□□□□□ -0.88
PCNX1-213ENST00000556846 DDR1Q08345 913 aa9.54□□□□□ -0.88
PCNX1-213ENST00000556846 DALRD3Q5D0E6 543 aaKnown RBP9.54□□□□□ -0.88
PCNX1-213ENST00000556846 MCM10Q7L590 875 aa9.54□□□□□ -0.88
PCNX1-213ENST00000556846 CICQ96RK0 1608 aaPredicted RBP9.53□□□□□ -0.88
PCNX1-213ENST00000556846 COL15A1P39059 1388 aa9.53□□□□□ -0.88
PCNX1-213ENST00000556846 HEG1Q9ULI3 1381 aa9.53□□□□□ -0.88
PCNX1-213ENST00000556846 POLRMTO00411 1230 aaKnown RBP9.53□□□□□ -0.88
PCNX1-213ENST00000556846 NPHP1O15259 732 aa9.53□□□□□ -0.88
PCNX1-213ENST00000556846 SERPINB2P05120 415 aa9.53□□□□□ -0.88
PCNX1-213ENST00000556846 CHRNA5P30532 468 aa9.53□□□□□ -0.88
PCNX1-213ENST00000556846 NFIXQ14938 502 aa9.53□□□□□ -0.88
PCNX1-213ENST00000556846 TBC1D2BQ9UPU7 963 aa9.53□□□□□ -0.88
PCNX1-213ENST00000556846 ATP10DQ9P241 1426 aa9.53□□□□□ -0.88
PCNX1-213ENST00000556846 PXDNLA1KZ92 1463 aa9.53□□□□□ -0.88
PCNX1-213ENST00000556846 ZNF831Q5JPB2 1677 aa9.52□□□□□ -0.89
PCNX1-213ENST00000556846 KCNQ3O43525 872 aa9.52□□□□□ -0.89
PCNX1-213ENST00000556846 HTATSF1O43719 755 aaKnown RBP9.52□□□□□ -0.89
PCNX1-213ENST00000556846 A1BGP04217 495 aa9.52□□□□□ -0.89
PCNX1-213ENST00000556846 DCTN1Q14203 1278 aa9.52□□□□□ -0.89
PCNX1-213ENST00000556846 C10orf71Q711Q0 1435 aa9.52□□□□□ -0.89
PCNX1-213ENST00000556846 PNNQ9H307 717 aaKnown RBP9.52□□□□□ -0.89
PCNX1-213ENST00000556846 MRC1P22897 1456 aa9.52□□□□□ -0.89
PCNX1-213ENST00000556846 SCN11AQ9UI33 1791 aa9.51□□□□□ -0.89
PCNX1-213ENST00000556846 SNRPA1P09661 255 aaKnown RBP9.51□□□□□ -0.89
PCNX1-213ENST00000556846 KCNA3P22001 575 aa9.51□□□□□ -0.89
PCNX1-213ENST00000556846 IL6STP40189 918 aaPredicted RBP9.51□□□□□ -0.89
PCNX1-213ENST00000556846 EIF5P55010 431 aaKnown RBP9.51□□□□□ -0.89
PCNX1-213ENST00000556846 TAF7Q15545 349 aaPredicted RBP9.51□□□□□ -0.89
PCNX1-213ENST00000556846 DOK7Q18PE1 504 aa9.51□□□□□ -0.89
PCNX1-213ENST00000556846 ZNF710Q8N1W2 664 aa9.51□□□□□ -0.89
PCNX1-213ENST00000556846 BCL2L12Q9HB09 334 aa9.51□□□□□ -0.89
PCNX1-213ENST00000556846 USP16Q9Y5T5 823 aa9.51□□□□□ -0.89
PCNX1-213ENST00000556846 KCPQ6ZWJ8 1503 aa9.51□□□□□ -0.89
PCNX1-213ENST00000556846 COL5A3P25940 1745 aaPredicted RBP9.51□□□□□ -0.89
PCNX1-213ENST00000556846 CEMIPQ8WUJ3 1361 aa9.5□□□□□ -0.89
PCNX1-213ENST00000556846 H0YIN7 160 aa9.5□□□□□ -0.89
PCNX1-213ENST00000556846 VASPP50552 380 aaPredicted RBP9.5□□□□□ -0.89
PCNX1-213ENST00000556846 DDX10Q13206 875 aaKnown RBP9.5□□□□□ -0.89
PCNX1-213ENST00000556846 TBC1D9BQ66K14 1250 aa9.5□□□□□ -0.89
PCNX1-213ENST00000556846 SETDB2Q96T68 719 aa9.5□□□□□ -0.89
PCNX1-213ENST00000556846 MIS18AQ9NYP9 233 aa9.5□□□□□ -0.89
PCNX1-213ENST00000556846 CHD4Q14839 1912 aa9.5□□□□□ -0.89
PCNX1-213ENST00000556846 MAPK8IP3Q9UPT6 1336 aa9.5□□□□□ -0.89
PCNX1-213ENST00000556846 C4AP0C0L4 1744 aa9.49□□□□□ -0.89
PCNX1-213ENST00000556846 TJP1Q07157 1748 aa9.49□□□□□ -0.89
PCNX1-213ENST00000556846 G3V3G9 751 aa9.49□□□□□ -0.89
PCNX1-213ENST00000556846 PIP4K2AP48426 406 aaPredicted RBP9.49□□□□□ -0.89
PCNX1-213ENST00000556846 RALBP1Q15311 655 aa9.49□□□□□ -0.89
PCNX1-213ENST00000556846 C9orf131Q5VYM1 1079 aa9.49□□□□□ -0.89
PCNX1-213ENST00000556846 DZIP3Q86Y13 1208 aaKnown RBP9.49□□□□□ -0.89
PCNX1-213ENST00000556846 C2CD5Q86YS7 1000 aa9.49□□□□□ -0.89
PCNX1-213ENST00000556846 PNISRQ8TF01 805 aaKnown RBP9.49□□□□□ -0.89
PCNX1-213ENST00000556846 PRAMEF22A3QJZ6 481 aa9.48□□□□□ -0.89
PCNX1-213ENST00000556846 PDE6BP35913 854 aa9.48□□□□□ -0.89
PCNX1-213ENST00000556846 CCDC24Q8N4L8 307 aa9.48□□□□□ -0.89
PCNX1-213ENST00000556846 TTLL6Q8N841 843 aa9.48□□□□□ -0.89
PCNX1-213ENST00000556846 ZNF622Q969S3 477 aaKnown RBP eCLIP9.48□□□□□ -0.89
PCNX1-213ENST00000556846 MYH14Q7Z406 1995 aaKnown RBP9.48□□□□□ -0.89
PCNX1-213ENST00000556846 ST5P78524 1137 aa9.47□□□□□ -0.89
PCNX1-213ENST00000556846 NFE2L2Q16236 605 aa9.47□□□□□ -0.89
PCNX1-213ENST00000556846 NGEFQ8N5V2 710 aa9.47□□□□□ -0.89
PCNX1-213ENST00000556846 RNF181Q9P0P0 153 aa9.47□□□□□ -0.89
PCNX1-213ENST00000556846 ZNF652Q9Y2D9 606 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms