RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 DNMT3AQ9Y6K1 912 aaPredicted RBP9.92□□□□□ -0.82
HIF1A-209ENST00000556827 EML1O00423 815 aa9.91□□□□□ -0.82
HIF1A-209ENST00000556827 PPP1R12BO60237 982 aaPredicted RBP9.91□□□□□ -0.82
HIF1A-209ENST00000556827 ARAFP10398 606 aa9.91□□□□□ -0.82
HIF1A-209ENST00000556827 SEC13P55735 322 aa9.91□□□□□ -0.82
HIF1A-209ENST00000556827 C1orf229Q6ZS94 237 aaPredicted RBP9.91□□□□□ -0.82
HIF1A-209ENST00000556827 GPC6Q9Y625 555 aaPredicted RBP9.91□□□□□ -0.82
HIF1A-209ENST00000556827 NEURL1BA8MQ27 555 aa9.9□□□□□ -0.82
HIF1A-209ENST00000556827 LMOD1P29536 600 aaPredicted RBP9.9□□□□□ -0.82
HIF1A-209ENST00000556827 PRR12Q9ULL5 1215 aa9.9□□□□□ -0.82
HIF1A-209ENST00000556827 ADH6P28332 368 aa9.89□□□□□ -0.83
HIF1A-209ENST00000556827 FAM182BQ5T319 152 aa9.89□□□□□ -0.83
HIF1A-209ENST00000556827 HCN4Q9Y3Q4 1203 aa9.89□□□□□ -0.83
HIF1A-209ENST00000556827 DKK1O94907 266 aa9.88□□□□□ -0.83
HIF1A-209ENST00000556827 CRTC2Q53ET0 693 aaPredicted RBP9.88□□□□□ -0.83
HIF1A-209ENST00000556827 PHACTR1Q9C0D0 580 aa9.88□□□□□ -0.83
HIF1A-209ENST00000556827 MARK1Q9P0L2 795 aa9.88□□□□□ -0.83
HIF1A-209ENST00000556827 EFSO43281 561 aa9.87□□□□□ -0.83
HIF1A-209ENST00000556827 EPXP11678 715 aa9.87□□□□□ -0.83
HIF1A-209ENST00000556827 HIRAP54198 1017 aaPredicted RBP9.87□□□□□ -0.83
HIF1A-209ENST00000556827 SNRPNP63162 240 aaKnown RBP9.87□□□□□ -0.83
HIF1A-209ENST00000556827 LAMC2Q13753 1193 aa9.87□□□□□ -0.83
HIF1A-209ENST00000556827 C1orf53Q5VUE5 145 aa9.87□□□□□ -0.83
HIF1A-209ENST00000556827 CHMP7Q8WUX9 453 aaPredicted RBP9.87□□□□□ -0.83
HIF1A-209ENST00000556827 SCG3Q8WXD2 468 aaKnown RBP9.87□□□□□ -0.83
HIF1A-209ENST00000556827 HINFPQ9BQA5 517 aa9.87□□□□□ -0.83
HIF1A-209ENST00000556827 VRTNQ9H8Y1 702 aa9.87□□□□□ -0.83
HIF1A-209ENST00000556827 HCN2Q9UL51 889 aa9.87□□□□□ -0.83
HIF1A-209ENST00000556827 MKL2Q9ULH7 1088 aa9.87□□□□□ -0.83
HIF1A-209ENST00000556827 USP17L15C9J2P7 530 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 USP17L10C9JJH3 530 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 USP17L13C9JLJ4 530 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 USP17L12C9JPN9 530 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 USP17L11C9JVI0 530 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 USP17L21D6R901 530 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 USP17L18D6R9N7 530 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 USP17L22D6RA61 530 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 USP17L17D6RBQ6 530 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 USP17L19D6RCP7 530 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 USP17L20D6RJB6 530 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 USP17L24Q0WX57 530 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 DPYDQ12882 1025 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 CCDC82Q8N4S0 544 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 STRN4Q9NRL3 753 aa9.86□□□□□ -0.83
HIF1A-209ENST00000556827 PCBP4P57723 403 aaKnown RBP9.85□□□□□ -0.83
HIF1A-209ENST00000556827 PTK7Q13308 1070 aa9.85□□□□□ -0.83
HIF1A-209ENST00000556827 KANK4Q5T7N3 995 aaPredicted RBP9.85□□□□□ -0.83
HIF1A-209ENST00000556827 ZNF468Q5VIY5 522 aaPredicted RBP9.85□□□□□ -0.83
HIF1A-209ENST00000556827 GPAT2Q6NUI2 795 aa9.85□□□□□ -0.83
HIF1A-209ENST00000556827 HSH2DQ96JZ2 352 aa9.85□□□□□ -0.83
HIF1A-209ENST00000556827 ARID3AQ99856 593 aa9.85□□□□□ -0.83
HIF1A-209ENST00000556827 AVENQ9NQS1 362 aaPredicted RBP9.85□□□□□ -0.83
HIF1A-209ENST00000556827 ATAD2Q6PL18 1390 aa9.85□□□□□ -0.83
HIF1A-209ENST00000556827 FAM196BA6NMK8 535 aa9.84□□□□□ -0.83
HIF1A-209ENST00000556827 C21orf2O43822 256 aa9.84□□□□□ -0.83
HIF1A-209ENST00000556827 ANKMY2Q8IV38 441 aa9.84□□□□□ -0.83
HIF1A-209ENST00000556827 NGLY1Q96IV0 654 aa9.84□□□□□ -0.83
HIF1A-209ENST00000556827 ANKIB1Q9P2G1 1089 aa9.84□□□□□ -0.83
HIF1A-209ENST00000556827 LGR5O75473 907 aa9.83□□□□□ -0.84
HIF1A-209ENST00000556827 POTEAQ6S8J7 498 aa9.83□□□□□ -0.84
HIF1A-209ENST00000556827 GAS2L2Q8NHY3 880 aa9.83□□□□□ -0.84
HIF1A-209ENST00000556827 C7orf43Q8WVR3 580 aa9.83□□□□□ -0.84
HIF1A-209ENST00000556827 DCAF5Q96JK2 942 aa9.83□□□□□ -0.84
HIF1A-209ENST00000556827 BTBD6Q96KE9 485 aa9.83□□□□□ -0.84
HIF1A-209ENST00000556827 CEP63Q96MT8 703 aa9.83□□□□□ -0.84
HIF1A-209ENST00000556827 FCHSD1Q86WN1 690 aa9.82□□□□□ -0.84
HIF1A-209ENST00000556827 ALDH16A1Q8IZ83 802 aa9.82□□□□□ -0.84
HIF1A-209ENST00000556827 C2orf49Q9BVC5 232 aaPredicted RBP9.82□□□□□ -0.84
HIF1A-209ENST00000556827 KLF15Q9UIH9 416 aa9.82□□□□□ -0.84
HIF1A-209ENST00000556827 CFAP70Q5T0N1 1121 aa9.81□□□□□ -0.84
HIF1A-209ENST00000556827 STAG2Q8N3U4 1231 aa9.81□□□□□ -0.84
HIF1A-209ENST00000556827 CCDC97Q96F63 343 aaPredicted RBP9.81□□□□□ -0.84
HIF1A-209ENST00000556827 BRD7Q9NPI1 651 aa9.81□□□□□ -0.84
HIF1A-209ENST00000556827 PIK3R2O00459 728 aa9.8□□□□□ -0.84
HIF1A-209ENST00000556827 RFX1P22670 979 aa9.8□□□□□ -0.84
HIF1A-209ENST00000556827 SFSWAPQ12872 951 aaKnown RBP9.8□□□□□ -0.84
HIF1A-209ENST00000556827 HIF1AQ16665 826 aa9.8□□□□□ -0.84
HIF1A-209ENST00000556827 CHSY3Q70JA7 882 aa9.8□□□□□ -0.84
HIF1A-209ENST00000556827 SYT9Q86SS6 491 aa9.8□□□□□ -0.84
HIF1A-209ENST00000556827 ZNF280CQ8ND82 737 aa9.8□□□□□ -0.84
HIF1A-209ENST00000556827 SUSD3Q96L08 255 aa9.8□□□□□ -0.84
HIF1A-209ENST00000556827 IGHA1P01876 353 aa9.79□□□□□ -0.84
HIF1A-209ENST00000556827 NEUROD1Q13562 356 aa9.79□□□□□ -0.84
HIF1A-209ENST00000556827 GRIN2CQ14957 1233 aa9.79□□□□□ -0.84
HIF1A-209ENST00000556827 GNB5O14775 395 aa9.78□□□□□ -0.84
HIF1A-209ENST00000556827 IGFBP4P22692 258 aa9.78□□□□□ -0.84
HIF1A-209ENST00000556827 TYRO3Q06418 890 aa9.78□□□□□ -0.84
HIF1A-209ENST00000556827 SPEM2Q0P670 501 aa9.78□□□□□ -0.84
HIF1A-209ENST00000556827 CDCA8Q53HL2 280 aa9.78□□□□□ -0.84
HIF1A-209ENST00000556827 SERPINA10Q9UK55 444 aa9.78□□□□□ -0.84
HIF1A-209ENST00000556827 HOXB4P17483 251 aaPredicted RBP9.77□□□□□ -0.85
HIF1A-209ENST00000556827 DGKGP49619 791 aa9.77□□□□□ -0.85
HIF1A-209ENST00000556827 PLA2G4EQ3MJ16 856 aa9.77□□□□□ -0.85
HIF1A-209ENST00000556827 SLC30A3Q99726 388 aa9.77□□□□□ -0.85
HIF1A-209ENST00000556827 ALAS2P22557 587 aa9.76□□□□□ -0.85
HIF1A-209ENST00000556827 RTN1Q16799 776 aa9.76□□□□□ -0.85
HIF1A-209ENST00000556827 LINC00114Q6XXX2 140 aa9.76□□□□□ -0.85
HIF1A-209ENST00000556827 RAB44Q7Z6P3 723 aaPredicted RBP9.76□□□□□ -0.85
HIF1A-209ENST00000556827 FAM200AQ8TCP9 573 aa9.76□□□□□ -0.85
HIF1A-209ENST00000556827 ARXQ96QS3 562 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 314.2 ms