RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 TTLL7Q6ZT98 887 aa13.54□□□□□ -0.24
SNX6-208ENST00000556712 TNRC6CQ9HCJ0 1690 aaKnown RBP13.53□□□□□ -0.24
SNX6-208ENST00000556712 FAM9BQ8IZU0 186 aa13.53□□□□□ -0.24
SNX6-208ENST00000556712 CFAP44Q96MT7 982 aa13.53□□□□□ -0.24
SNX6-208ENST00000556712 ZNF853P0CG23 659 aa13.52□□□□□ -0.25
SNX6-208ENST00000556712 KCNA3P22001 575 aa13.52□□□□□ -0.25
SNX6-208ENST00000556712 PDIA6Q15084 440 aa13.52□□□□□ -0.25
SNX6-208ENST00000556712 PRR5LQ6MZQ0 368 aa13.52□□□□□ -0.25
SNX6-208ENST00000556712 LRP10Q7Z4F1 713 aa13.52□□□□□ -0.25
SNX6-208ENST00000556712 ZBTB3Q9H5J0 574 aa13.52□□□□□ -0.25
SNX6-208ENST00000556712 IFT57Q9NWB7 429 aa13.52□□□□□ -0.25
SNX6-208ENST00000556712 BCS1LQ9Y276 419 aa13.52□□□□□ -0.25
SNX6-208ENST00000556712 ERBB4Q15303 1308 aa13.52□□□□□ -0.25
SNX6-208ENST00000556712 MAP3K15Q6ZN16 1313 aa13.51□□□□□ -0.25
SNX6-208ENST00000556712 GRIN3BO60391 1043 aa13.51□□□□□ -0.25
SNX6-208ENST00000556712 KIF6Q6ZMV9 814 aa13.51□□□□□ -0.25
SNX6-208ENST00000556712 SETDB2Q96T68 719 aa13.51□□□□□ -0.25
SNX6-208ENST00000556712 ZNF652Q9Y2D9 606 aa13.51□□□□□ -0.25
SNX6-208ENST00000556712 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
SNX6-208ENST00000556712 FAM177BA6PVY3 158 aa13.5□□□□□ -0.25
SNX6-208ENST00000556712 GNAI1P63096 354 aa13.5□□□□□ -0.25
SNX6-208ENST00000556712 CALD1Q05682 793 aaKnown RBP13.5□□□□□ -0.25
SNX6-208ENST00000556712 HDGFL1Q5TGJ6 251 aa13.5□□□□□ -0.25
SNX6-208ENST00000556712 CNBD1Q8NA66 436 aa13.5□□□□□ -0.25
SNX6-208ENST00000556712 TSR2Q969E8 191 aaKnown RBP13.5□□□□□ -0.25
SNX6-208ENST00000556712 CHPF2Q9P2E5 772 aa13.5□□□□□ -0.25
SNX6-208ENST00000556712 NIP7Q9Y221 180 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNX6-208ENST00000556712 ARFGEF2Q9Y6D5 1785 aa13.5□□□□□ -0.25
SNX6-208ENST00000556712 ATP10DQ9P241 1426 aa13.49□□□□□ -0.25
SNX6-208ENST00000556712 NPHP1O15259 732 aa13.49□□□□□ -0.25
SNX6-208ENST00000556712 DUSP27Q5VZP5 1158 aa13.49□□□□□ -0.25
SNX6-208ENST00000556712 CLEC4GQ6UXB4 293 aa13.49□□□□□ -0.25
SNX6-208ENST00000556712 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
SNX6-208ENST00000556712 WWC1Q8IX03 1113 aa13.49□□□□□ -0.25
SNX6-208ENST00000556712 ABCC12Q96J65 1359 aa13.48□□□□□ -0.25
SNX6-208ENST00000556712 UBN2Q6ZU65 1347 aa13.48□□□□□ -0.25
SNX6-208ENST00000556712 ELL2O00472 640 aaPredicted RBP13.48□□□□□ -0.25
SNX6-208ENST00000556712 GPTP24298 496 aa13.48□□□□□ -0.25
SNX6-208ENST00000556712 AIMP1Q12904 312 aaKnown RBP13.48□□□□□ -0.25
SNX6-208ENST00000556712 CCDC27Q2M243 656 aa13.48□□□□□ -0.25
SNX6-208ENST00000556712 NBPF5PQ86XG9 351 aaPredicted RBP13.48□□□□□ -0.25
SNX6-208ENST00000556712 C2CD5Q86YS7 1000 aa13.48□□□□□ -0.25
SNX6-208ENST00000556712 XAGE3Q8WTP9 111 aa13.48□□□□□ -0.25
SNX6-208ENST00000556712 PIM2Q9P1W9 311 aa13.48□□□□□ -0.25
SNX6-208ENST00000556712 ERVV-1B6SEH8 477 aa13.47□□□□□ -0.25
SNX6-208ENST00000556712 HOXB7P09629 217 aa13.47□□□□□ -0.25
SNX6-208ENST00000556712 ST5P78524 1137 aa13.47□□□□□ -0.25
SNX6-208ENST00000556712 C8orf58Q8NAV2 365 aa13.47□□□□□ -0.25
SNX6-208ENST00000556712 RGL2O15211 777 aa13.46□□□□□ -0.25
SNX6-208ENST00000556712 DALRD3Q5D0E6 543 aaKnown RBP13.46□□□□□ -0.25
SNX6-208ENST00000556712 COPS6Q7L5N1 327 aa13.46□□□□□ -0.25
SNX6-208ENST00000556712 BRIP1Q9BX63 1249 aa13.46□□□□□ -0.25
SNX6-208ENST00000556712 DDX21Q9NR30 783 aaKnown RBP eCLIP13.46□□□□□ -0.25
SNX6-208ENST00000556712 SLX4Q8IY92 1834 aa13.46□□□□□ -0.26
SNX6-208ENST00000556712 LAMB2P55268 1798 aa13.45□□□□□ -0.26
SNX6-208ENST00000556712 H0YIN7 160 aa13.45□□□□□ -0.26
SNX6-208ENST00000556712 GIGYF2Q6Y7W6 1299 aaKnown RBP13.45□□□□□ -0.26
SNX6-208ENST00000556712 NUTM1Q86Y26 1132 aa13.45□□□□□ -0.26
SNX6-208ENST00000556712 TSPYL6Q8N831 410 aa13.45□□□□□ -0.26
SNX6-208ENST00000556712 ZNF784Q8NCA9 323 aaPredicted RBP13.45□□□□□ -0.26
SNX6-208ENST00000556712 ADCY9O60503 1353 aa13.45□□□□□ -0.26
SNX6-208ENST00000556712 SBF1O95248 1867 aa13.44□□□□□ -0.26
SNX6-208ENST00000556712 FANCIQ9NVI1 1328 aa13.44□□□□□ -0.26
SNX6-208ENST00000556712 PDE6BP35913 854 aa13.44□□□□□ -0.26
SNX6-208ENST00000556712 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
SNX6-208ENST00000556712 ZNF622Q969S3 477 aaKnown RBP eCLIP13.44□□□□□ -0.264e-7■■□□□ 11.4
SNX6-208ENST00000556712 ZNF428Q96B54 188 aa13.44□□□□□ -0.26
SNX6-208ENST00000556712 IL16Q14005 1332 aa13.43□□□□□ -0.26
SNX6-208ENST00000556712 RASSF7Q02833 373 aa13.43□□□□□ -0.26
SNX6-208ENST00000556712 ERFEQ4G0M1 354 aa13.43□□□□□ -0.26
SNX6-208ENST00000556712 SUSD4Q5VX71 490 aa13.43□□□□□ -0.26
SNX6-208ENST00000556712 TIAM2Q8IVF5 1701 aa13.43□□□□□ -0.26
SNX6-208ENST00000556712 ZNF34Q8IZ26 560 aa13.43□□□□□ -0.26
SNX6-208ENST00000556712 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
SNX6-208ENST00000556712 ZNF219Q9P2Y4 722 aaPredicted RBP13.43□□□□□ -0.26
SNX6-208ENST00000556712 DBF4Q9UBU7 674 aaPredicted RBP13.43□□□□□ -0.26
SNX6-208ENST00000556712 IBTKQ9P2D0 1353 aaPredicted RBP13.43□□□□□ -0.26
SNX6-208ENST00000556712 CCDC88AQ3V6T2 1871 aa13.42□□□□□ -0.26
SNX6-208ENST00000556712 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
SNX6-208ENST00000556712 TCERG1O14776 1098 aaKnown RBP13.42□□□□□ -0.26
SNX6-208ENST00000556712 NTSR2O95665 410 aa13.42□□□□□ -0.26
SNX6-208ENST00000556712 GTF2E1P29083 439 aaPredicted RBP13.42□□□□□ -0.26
SNX6-208ENST00000556712 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
SNX6-208ENST00000556712 TPTE2Q6XPS3 522 aa13.42□□□□□ -0.26
SNX6-208ENST00000556712 TTLL6Q8N841 843 aa13.42□□□□□ -0.26
SNX6-208ENST00000556712 PHAXQ9H814 394 aaKnown RBP13.42□□□□□ -0.26
SNX6-208ENST00000556712 FER1L6Q2WGJ9 1857 aa13.42□□□□□ -0.26
SNX6-208ENST00000556712 SRGNP10124 158 aa13.41□□□□□ -0.26
SNX6-208ENST00000556712 NYXQ9GZU5 481 aa13.41□□□□□ -0.26
SNX6-208ENST00000556712 HYPKQ9NX55 129 aa13.41□□□□□ -0.26
SNX6-208ENST00000556712 RIC1Q4ADV7 1423 aa13.4□□□□□ -0.26
SNX6-208ENST00000556712 TWISTNBQ3B726 338 aaPredicted RBP13.4□□□□□ -0.26
SNX6-208ENST00000556712 WDR63Q8IWG1 891 aa13.4□□□□□ -0.26
SNX6-208ENST00000556712 CCER2I3L3R5 266 aa13.39□□□□□ -0.27
SNX6-208ENST00000556712 C21orf2O43822 256 aa13.39□□□□□ -0.27
SNX6-208ENST00000556712 PARP10Q53GL7 1025 aa13.39□□□□□ -0.27
SNX6-208ENST00000556712 STYK1Q6J9G0 422 aa13.39□□□□□ -0.27
SNX6-208ENST00000556712 PRPF40BQ6NWY9 871 aaKnown RBP13.39□□□□□ -0.27
SNX6-208ENST00000556712 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
SNX6-208ENST00000556712 NLRP10Q86W26 655 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 339.9 ms