RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 CCDC94Q9BW85 323 aaPredicted RBP7.63□□□□□ -1.19
TDP1-215ENST00000556498 GZF1Q9H116 711 aaPredicted RBP7.63□□□□□ -1.19
TDP1-215ENST00000556498 SMC4Q9NTJ3 1288 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 TOR4AQ9NXH8 423 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 GOLGA6AQ9NYA3 693 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 ABCF2Q9UG63 623 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 WASF2Q9Y6W5 498 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 TTC24A2A3L6 582 aaPredicted RBP7.62□□□□□ -1.19
TDP1-215ENST00000556498 TMEM88BA6NKF7 163 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 J3QL48 77 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 TNFRSF10AO00220 468 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 DHX16O60231 1041 aaKnown RBP7.62□□□□□ -1.19
TDP1-215ENST00000556498 LILRA1O75019 489 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 RGS20O76081 388 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 DKK1O94907 266 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 SCP2P22307 547 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 SSFA2P28290 1259 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 PEX19P40855 299 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 PRR20EP86478 221 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 PRR20CP86479 221 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 PRR20DP86480 221 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 PRR20BP86481 221 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 PRR20AP86496 221 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 NNTQ13423 1086 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 CCDC181Q5TID7 509 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 ZNF784Q8NCA9 323 aaPredicted RBP7.62□□□□□ -1.19
TDP1-215ENST00000556498 ESF1Q9H501 851 aaKnown RBP7.62□□□□□ -1.19
TDP1-215ENST00000556498 BRMS1Q9HCU9 246 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 JADE2Q9NQC1 790 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 SYNPO2Q9UMS6 1093 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 KIAA1024Q9UPX6 916 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 EMILIN1Q9Y6C2 1016 aa7.62□□□□□ -1.19
TDP1-215ENST00000556498 CTAGE5O15320 804 aa7.61□□□□□ -1.19
TDP1-215ENST00000556498 TMEM164Q5U3C3 297 aa7.61□□□□□ -1.19
TDP1-215ENST00000556498 SIX5Q8N196 739 aa7.61□□□□□ -1.19
TDP1-215ENST00000556498 LSM14AQ8ND56 463 aaKnown RBP7.61□□□□□ -1.19
TDP1-215ENST00000556498 FAM200AQ8TCP9 573 aa7.61□□□□□ -1.19
TDP1-215ENST00000556498 STK32AQ8WU08 396 aa7.61□□□□□ -1.19
TDP1-215ENST00000556498 ZNF594Q96JF6 807 aaPredicted RBP7.61□□□□□ -1.19
TDP1-215ENST00000556498 OSBPL3Q9H4L5 887 aa7.61□□□□□ -1.19
TDP1-215ENST00000556498 CYLDQ9NQC7 956 aa7.61□□□□□ -1.19
TDP1-215ENST00000556498 PGPEP1Q9NXJ5 209 aa7.61□□□□□ -1.19
TDP1-215ENST00000556498 KIF16BQ96L93 1317 aa7.6□□□□□ -1.19
TDP1-215ENST00000556498 CARNS1A5YM72 827 aa7.6□□□□□ -1.19
TDP1-215ENST00000556498 MPHOSPH10O00566 681 aaKnown RBP7.6□□□□□ -1.19
TDP1-215ENST00000556498 IPO7O95373 1038 aaKnown RBP7.6□□□□□ -1.19
TDP1-215ENST00000556498 SMPD1P17405 629 aa7.6□□□□□ -1.19
TDP1-215ENST00000556498 DPYDQ12882 1025 aa7.6□□□□□ -1.19
TDP1-215ENST00000556498 HSP90B2PQ58FF3 399 aa7.6□□□□□ -1.19
TDP1-215ENST00000556498 CCDC102BQ68D86 513 aa7.6□□□□□ -1.19
TDP1-215ENST00000556498 MORC4Q8TE76 937 aa7.6□□□□□ -1.19
TDP1-215ENST00000556498 FRAT1Q92837 279 aaPredicted RBP7.6□□□□□ -1.19
TDP1-215ENST00000556498 KLF16Q9BXK1 252 aaPredicted RBP7.6□□□□□ -1.19
TDP1-215ENST00000556498 DONSONQ9NYP3 566 aa7.6□□□□□ -1.19
TDP1-215ENST00000556498 KIF3AQ9Y496 699 aa7.6□□□□□ -1.19
TDP1-215ENST00000556498 RB1CC1Q8TDY2 1594 aa7.59□□□□□ -1.19
TDP1-215ENST00000556498 SMARCA5O60264 1052 aaPredicted RBP7.59□□□□□ -1.19
TDP1-215ENST00000556498 COQ9O75208 318 aa7.59□□□□□ -1.19
TDP1-215ENST00000556498 ADD1P35611 737 aaKnown RBP7.59□□□□□ -1.19
TDP1-215ENST00000556498 FAM69CQ0P6D2 419 aa7.59□□□□□ -1.19
TDP1-215ENST00000556498 TPCN2Q8NHX9 752 aa7.59□□□□□ -1.19
TDP1-215ENST00000556498 ZCRB1Q8TBF4 217 aaKnown RBP7.59□□□□□ -1.19
TDP1-215ENST00000556498 SMC3Q9UQE7 1217 aa7.59□□□□□ -1.19
TDP1-215ENST00000556498 SYNRGQ9UMZ2 1314 aa7.58□□□□□ -1.2
TDP1-215ENST00000556498 IPO8O15397 1037 aaKnown RBP7.58□□□□□ -1.2
TDP1-215ENST00000556498 PSME1Q06323 249 aa7.58□□□□□ -1.2
TDP1-215ENST00000556498 TRDNQ13061 729 aa7.58□□□□□ -1.2
TDP1-215ENST00000556498 PPP4R2Q9NY27 417 aa7.58□□□□□ -1.2
TDP1-215ENST00000556498 KLHL33A6NCF5 533 aa7.57□□□□□ -1.2
TDP1-215ENST00000556498 DYNC1I1O14576 645 aa7.57□□□□□ -1.2
TDP1-215ENST00000556498 PPP1R12AO14974 1030 aaPredicted RBP7.57□□□□□ -1.2
TDP1-215ENST00000556498 CD151P48509 253 aa7.57□□□□□ -1.2
TDP1-215ENST00000556498 SEC13P55735 322 aa7.57□□□□□ -1.2
TDP1-215ENST00000556498 FOXD4Q12950 439 aaPredicted RBP7.57□□□□□ -1.2
TDP1-215ENST00000556498 GJC2Q5T442 439 aaPredicted RBP7.57□□□□□ -1.2
TDP1-215ENST00000556498 ZKSCAN2Q63HK3 967 aa7.57□□□□□ -1.2
TDP1-215ENST00000556498 RPAINQ86UA6 219 aa7.57□□□□□ -1.2
TDP1-215ENST00000556498 ITPKCQ96DU7 683 aa7.57□□□□□ -1.2
TDP1-215ENST00000556498 MED4Q9NPJ6 270 aa7.57□□□□□ -1.2
TDP1-215ENST00000556498 FAM13BQ9NYF5 915 aa7.57□□□□□ -1.2
TDP1-215ENST00000556498 SUGT1Q9Y2Z0 365 aa7.57□□□□□ -1.2
TDP1-215ENST00000556498 RPS6KL1Q9Y6S9 549 aa7.57□□□□□ -1.2
TDP1-215ENST00000556498 SFI1A8K8P3 1242 aa7.56□□□□□ -1.2
TDP1-215ENST00000556498 EPB41L2O43491 1005 aaKnown RBP7.56□□□□□ -1.2
TDP1-215ENST00000556498 SETSIPP0DME0 302 aa7.56□□□□□ -1.2
TDP1-215ENST00000556498 TDO2P48775 406 aa7.56□□□□□ -1.2
TDP1-215ENST00000556498 WDR4P57081 412 aaKnown RBP7.56□□□□□ -1.2
TDP1-215ENST00000556498 PSMC1P62191 440 aaKnown RBP7.56□□□□□ -1.2
TDP1-215ENST00000556498 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.56□□□□□ -1.2
TDP1-215ENST00000556498 Q6ZVU0 165 aa7.56□□□□□ -1.2
TDP1-215ENST00000556498 CYP2U1Q7Z449 544 aa7.56□□□□□ -1.2
TDP1-215ENST00000556498 TIGD1Q96MW7 591 aa7.56□□□□□ -1.2
TDP1-215ENST00000556498 AMOTL2Q9Y2J4 779 aa7.56□□□□□ -1.2
TDP1-215ENST00000556498 TMEM229AB2RXF0 380 aa7.55□□□□□ -1.2
TDP1-215ENST00000556498 WASLO00401 505 aaPredicted RBP7.55□□□□□ -1.2
TDP1-215ENST00000556498 ZIC2O95409 532 aaPredicted RBP7.55□□□□□ -1.2
TDP1-215ENST00000556498 GNRH1P01148 92 aa7.55□□□□□ -1.2
TDP1-215ENST00000556498 TIMP2P16035 220 aa7.55□□□□□ -1.2
TDP1-215ENST00000556498 COPB2P35606 906 aa7.55□□□□□ -1.2
TDP1-215ENST00000556498 SCNN1DP51172 638 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms