RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 DDX58O95786 925 aaKnown RBP17.93■□□□□ 0.46
VIPAS39-208ENST00000556412 MAP3K15Q6ZN16 1313 aa17.93■□□□□ 0.46
VIPAS39-208ENST00000556412 ANKRD13DQ6ZTN6 518 aa17.93■□□□□ 0.46
VIPAS39-208ENST00000556412 RIC3Q7Z5B4 369 aa17.93■□□□□ 0.46
VIPAS39-208ENST00000556412 FRAT1Q92837 279 aaPredicted RBP17.93■□□□□ 0.46
VIPAS39-208ENST00000556412 MYH14Q7Z406 1995 aaKnown RBP17.92■□□□□ 0.46
VIPAS39-208ENST00000556412 GYS1P13807 737 aa17.92■□□□□ 0.46
VIPAS39-208ENST00000556412 FKBP8Q14318 412 aa17.91■□□□□ 0.46
VIPAS39-208ENST00000556412 HLFQ16534 295 aa17.91■□□□□ 0.46
VIPAS39-208ENST00000556412 BICDL1Q6ZP65 573 aa17.91■□□□□ 0.46
VIPAS39-208ENST00000556412 PLBD2Q8NHP8 589 aa17.91■□□□□ 0.46
VIPAS39-208ENST00000556412 ZNF652Q9Y2D9 606 aa17.91■□□□□ 0.46
VIPAS39-208ENST00000556412 NOB1Q9ULX3 412 aaKnown RBP17.91■□□□□ 0.46
VIPAS39-208ENST00000556412 UBR3Q6ZT12 1888 aa17.9■□□□□ 0.46
VIPAS39-208ENST00000556412 PI4KAP2A4QPH2 592 aa17.9■□□□□ 0.46
VIPAS39-208ENST00000556412 ERVV-1B6SEH8 477 aa17.9■□□□□ 0.46
VIPAS39-208ENST00000556412 PI4KAP1Q8N8J0 262 aa17.9■□□□□ 0.46
VIPAS39-208ENST00000556412 BCL2L12Q9HB09 334 aa17.9■□□□□ 0.46
VIPAS39-208ENST00000556412 ATF5Q9Y2D1 282 aaPredicted RBP17.9■□□□□ 0.46
VIPAS39-208ENST00000556412 MAP3K2Q9Y2U5 619 aa17.9■□□□□ 0.46
VIPAS39-208ENST00000556412 KIF16BQ96L93 1317 aa17.9■□□□□ 0.46
VIPAS39-208ENST00000556412 SLC16A10Q8TF71 515 aa17.89■□□□□ 0.45
VIPAS39-208ENST00000556412 F6X3S4 739 aa17.88■□□□□ 0.45
VIPAS39-208ENST00000556412 KSR2Q6VAB6 950 aa17.88■□□□□ 0.45
VIPAS39-208ENST00000556412 NLGN1Q8N2Q7 840 aa17.88■□□□□ 0.45
VIPAS39-208ENST00000556412 GPTP24298 496 aa17.88■□□□□ 0.45
VIPAS39-208ENST00000556412 TBC1D9BQ66K14 1250 aa17.88■□□□□ 0.45
VIPAS39-208ENST00000556412 GIGYF2Q6Y7W6 1299 aaKnown RBP17.88■□□□□ 0.45
VIPAS39-208ENST00000556412 MTFR1LQ9H019 292 aa17.88■□□□□ 0.45
VIPAS39-208ENST00000556412 PTPRCP08575 1304 aa17.88■□□□□ 0.45
VIPAS39-208ENST00000556412 ADCY9O60503 1353 aa17.87■□□□□ 0.45
VIPAS39-208ENST00000556412 SLC4A10Q6U841 1118 aa17.87■□□□□ 0.45
VIPAS39-208ENST00000556412 MYD88Q99836 296 aa17.87■□□□□ 0.45
VIPAS39-208ENST00000556412 NIP7Q9Y221 180 aaKnown RBP eCLIP17.87■□□□□ 0.45
VIPAS39-208ENST00000556412 TUBGCP6Q96RT7 1819 aa17.87■□□□□ 0.45
VIPAS39-208ENST00000556412 FAM177BA6PVY3 158 aa17.86■□□□□ 0.45
VIPAS39-208ENST00000556412 ATP5J2-PTCD1G3V325 749 aa17.86■□□□□ 0.45
VIPAS39-208ENST00000556412 CLEC4GQ6UXB4 293 aa17.86■□□□□ 0.45
VIPAS39-208ENST00000556412 IPO8O15397 1037 aaKnown RBP17.86■□□□□ 0.45
VIPAS39-208ENST00000556412 MMP10P09238 476 aa17.86■□□□□ 0.45
VIPAS39-208ENST00000556412 BRPF1P55201 1214 aaPredicted RBP17.86■□□□□ 0.45
VIPAS39-208ENST00000556412 DNAAF4Q8WXU2 420 aa17.86■□□□□ 0.45
VIPAS39-208ENST00000556412 NEXNQ0ZGT2 675 aa17.85■□□□□ 0.45
VIPAS39-208ENST00000556412 NFIXQ14938 502 aa17.85■□□□□ 0.45
VIPAS39-208ENST00000556412 HSP90AB3PQ58FF7 597 aa17.85■□□□□ 0.45
VIPAS39-208ENST00000556412 SETDB2Q96T68 719 aa17.85■□□□□ 0.45
VIPAS39-208ENST00000556412 C4AP0C0L4 1744 aa17.85■□□□□ 0.45
VIPAS39-208ENST00000556412 TCIRG1Q13488 830 aa17.84■□□□□ 0.45
VIPAS39-208ENST00000556412 METTL22Q9BUU2 404 aaPredicted RBP17.84■□□□□ 0.45
VIPAS39-208ENST00000556412 API5Q9BZZ5 524 aaKnown RBP17.84■□□□□ 0.45
VIPAS39-208ENST00000556412 NPHP1O15259 732 aa17.84■□□□□ 0.45
VIPAS39-208ENST00000556412 POLD1P28340 1107 aa17.84■□□□□ 0.45
VIPAS39-208ENST00000556412 ZKSCAN2Q63HK3 967 aa17.84■□□□□ 0.45
VIPAS39-208ENST00000556412 CLUAP1Q96AJ1 413 aa17.84■□□□□ 0.45
VIPAS39-208ENST00000556412 PLIN1O60240 522 aa17.83■□□□□ 0.44
VIPAS39-208ENST00000556412 ATF7IPQ6VMQ6 1270 aa17.83■□□□□ 0.44
VIPAS39-208ENST00000556412 PARP3Q9Y6F1 533 aa17.83■□□□□ 0.44
VIPAS39-208ENST00000556412 RGL2O15211 777 aa17.82■□□□□ 0.44
VIPAS39-208ENST00000556412 DDR1Q08345 913 aa17.82■□□□□ 0.44
VIPAS39-208ENST00000556412 SPON1Q9HCB6 807 aa17.82■□□□□ 0.44
VIPAS39-208ENST00000556412 TNNQ9UQP3 1299 aa17.82■□□□□ 0.44
VIPAS39-208ENST00000556412 SCN7AQ01118 1682 aa17.82■□□□□ 0.44
VIPAS39-208ENST00000556412 QSER1Q2KHR3 1735 aa17.82■□□□□ 0.44
VIPAS39-208ENST00000556412 TRIM27P14373 513 aa17.82■□□□□ 0.44
VIPAS39-208ENST00000556412 TM4SF1P30408 202 aa17.82■□□□□ 0.44
VIPAS39-208ENST00000556412 CWF19L2Q2TBE0 894 aaKnown RBP17.82■□□□□ 0.44
VIPAS39-208ENST00000556412 UBN2Q6ZU65 1347 aa17.82■□□□□ 0.44
VIPAS39-208ENST00000556412 ZNF34Q8IZ26 560 aa17.82■□□□□ 0.44
VIPAS39-208ENST00000556412 ARHGAP45Q92619 1136 aa17.82■□□□□ 0.44
VIPAS39-208ENST00000556412 ATP10DQ9P241 1426 aa17.82■□□□□ 0.44
VIPAS39-208ENST00000556412 CASZ1Q86V15 1759 aa17.81■□□□□ 0.44
VIPAS39-208ENST00000556412 CARMIL3Q8ND23 1372 aa17.81■□□□□ 0.44
VIPAS39-208ENST00000556412 NBPF5PQ86XG9 351 aaPredicted RBP17.81■□□□□ 0.44
VIPAS39-208ENST00000556412 FTSJ3Q8IY81 847 aaKnown RBP17.81■□□□□ 0.44
VIPAS39-208ENST00000556412 POLRMTO00411 1230 aaKnown RBP17.8■□□□□ 0.44
VIPAS39-208ENST00000556412 SERPINB2P05120 415 aa17.8■□□□□ 0.44
VIPAS39-208ENST00000556412 IGKV5-2P06315 115 aa17.8■□□□□ 0.44
VIPAS39-208ENST00000556412 NLRP10Q86W26 655 aa17.8■□□□□ 0.44
VIPAS39-208ENST00000556412 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.8■□□□□ 0.44
VIPAS39-208ENST00000556412 ISCA1Q9BUE6 129 aa17.8■□□□□ 0.44
VIPAS39-208ENST00000556412 CENPBP07199 599 aaPredicted RBP17.79■□□□□ 0.44
VIPAS39-208ENST00000556412 GTF2E1P29083 439 aaPredicted RBP17.79■□□□□ 0.44
VIPAS39-208ENST00000556412 PARP10Q53GL7 1025 aa17.79■□□□□ 0.44
VIPAS39-208ENST00000556412 BEND3Q5T5X7 828 aa17.79■□□□□ 0.44
VIPAS39-208ENST00000556412 SUSD4Q5VX71 490 aa17.79■□□□□ 0.44
VIPAS39-208ENST00000556412 LINS1Q8NG48 757 aa17.79■□□□□ 0.44
VIPAS39-208ENST00000556412 SRCIN1Q9C0H9 1055 aa17.79■□□□□ 0.44
VIPAS39-208ENST00000556412 RTL5Q5HYW3 569 aaPredicted RBP17.79■□□□□ 0.44
VIPAS39-208ENST00000556412 CCDC24Q8N4L8 307 aa17.79■□□□□ 0.44
VIPAS39-208ENST00000556412 CWC25Q9NXE8 425 aaPredicted RBP17.79■□□□□ 0.44
VIPAS39-208ENST00000556412 NEURL1BA8MQ27 555 aa17.78■□□□□ 0.44
VIPAS39-208ENST00000556412 PPP1R42Q7Z4L9 355 aa17.78■□□□□ 0.44
VIPAS39-208ENST00000556412 KLHL34Q8N239 644 aa17.78■□□□□ 0.44
VIPAS39-208ENST00000556412 CNBD1Q8NA66 436 aa17.78■□□□□ 0.44
VIPAS39-208ENST00000556412 TRMT112Q9UI30 125 aaKnown RBP17.78■□□□□ 0.44
VIPAS39-208ENST00000556412 BCORQ6W2J9 1755 aa17.78■□□□□ 0.44
VIPAS39-208ENST00000556412 PTGER2P43116 358 aa17.77■□□□□ 0.44
VIPAS39-208ENST00000556412 NUTM1Q86Y26 1132 aa17.77■□□□□ 0.44
VIPAS39-208ENST00000556412 DZIP1LQ8IYY4 767 aaKnown RBP17.77■□□□□ 0.44
VIPAS39-208ENST00000556412 CCDC191Q8NCU4 936 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms