RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ZNF827Q17R98 1081 aa10.05□□□□□ -0.8
ATXN3-236ENST00000556220 PUS10Q3MIT2 529 aaKnown RBP10.05□□□□□ -0.8
ATXN3-236ENST00000556220 DCAF11Q8TEB1 546 aa10.05□□□□□ -0.8
ATXN3-236ENST00000556220 ATP6V1AP38606 617 aa10.04□□□□□ -0.8
ATXN3-236ENST00000556220 GCGRP47871 477 aa10.04□□□□□ -0.8
ATXN3-236ENST00000556220 NLGN2Q8NFZ4 835 aa10.04□□□□□ -0.8
ATXN3-236ENST00000556220 EMID1Q96A84 441 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-236ENST00000556220 ACSBG1Q96GR2 724 aa10.04□□□□□ -0.8
ATXN3-236ENST00000556220 SPSB2Q99619 263 aa10.04□□□□□ -0.8
ATXN3-236ENST00000556220 SBF2Q86WG5 1849 aa10.04□□□□□ -0.8
ATXN3-236ENST00000556220 BRD4O60885 1362 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-236ENST00000556220 PPEF1O14829 653 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-236ENST00000556220 CSB-PGBD3P0DP91 1061 aa10.03□□□□□ -0.8
ATXN3-236ENST00000556220 YBX3P16989 372 aaKnown RBP eCLIP10.03□□□□□ -0.8
ATXN3-236ENST00000556220 FUT2Q10981 343 aa10.03□□□□□ -0.8
ATXN3-236ENST00000556220 MORN1Q5T089 497 aa10.03□□□□□ -0.8
ATXN3-236ENST00000556220 SPRYD7Q5W111 196 aa10.03□□□□□ -0.8
ATXN3-236ENST00000556220 NLRP7Q8WX94 980 aa10.03□□□□□ -0.8
ATXN3-236ENST00000556220 GPBP1L1Q9HC44 474 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-236ENST00000556220 LRRC4BQ9NT99 713 aa10.03□□□□□ -0.8
ATXN3-236ENST00000556220 LCE2BO14633 110 aa10.02□□□□□ -0.81
ATXN3-236ENST00000556220 MAP2K5Q13163 448 aa10.02□□□□□ -0.81
ATXN3-236ENST00000556220 ZNF598Q86UK7 904 aaKnown RBP10.02□□□□□ -0.81
ATXN3-236ENST00000556220 ARHGEF25Q86VW2 580 aa10.02□□□□□ -0.81
ATXN3-236ENST00000556220 ATP10DQ9P241 1426 aa10.01□□□□□ -0.81
ATXN3-236ENST00000556220 LRRC37A3O60309 1634 aa10.01□□□□□ -0.81
ATXN3-236ENST00000556220 SHANK3Q9BYB0 1731 aa10.01□□□□□ -0.81
ATXN3-236ENST00000556220 SRPK2P78362 688 aaKnown RBP10□□□□□ -0.81
ATXN3-236ENST00000556220 SLC27A3Q5K4L6 730 aa10□□□□□ -0.81
ATXN3-236ENST00000556220 LIAT1Q6ZQX7 453 aa10□□□□□ -0.81
ATXN3-236ENST00000556220 CABP1Q9NZU7 370 aa10□□□□□ -0.81
ATXN3-236ENST00000556220 SALL2Q9Y467 1007 aaPredicted RBP10□□□□□ -0.81
ATXN3-236ENST00000556220 PNPLA7Q6ZV29 1317 aa10□□□□□ -0.81
ATXN3-236ENST00000556220 USP6P35125 1406 aa9.99□□□□□ -0.81
ATXN3-236ENST00000556220 IRF6O14896 467 aa9.99□□□□□ -0.81
ATXN3-236ENST00000556220 GRIPAP1Q4V328 841 aa9.99□□□□□ -0.81
ATXN3-236ENST00000556220 TRIM67Q6ZTA4 783 aa9.99□□□□□ -0.81
ATXN3-236ENST00000556220 KCNH5Q8NCM2 988 aa9.99□□□□□ -0.81
ATXN3-236ENST00000556220 THAP11Q96EK4 314 aa9.99□□□□□ -0.81
ATXN3-236ENST00000556220 TFCP2L1Q9NZI6 479 aa9.99□□□□□ -0.81
ATXN3-236ENST00000556220 CCDC7Q96M83 1385 aa9.99□□□□□ -0.81
ATXN3-236ENST00000556220 ITSN1Q15811 1721 aa9.99□□□□□ -0.81
ATXN3-236ENST00000556220 PPIP5K1Q6PFW1 1433 aa9.99□□□□□ -0.81
ATXN3-236ENST00000556220 PRR20EP86478 221 aa9.98□□□□□ -0.81
ATXN3-236ENST00000556220 PRR20CP86479 221 aa9.98□□□□□ -0.81
ATXN3-236ENST00000556220 PRR20DP86480 221 aa9.98□□□□□ -0.81
ATXN3-236ENST00000556220 PRR20BP86481 221 aa9.98□□□□□ -0.81
ATXN3-236ENST00000556220 PRR20AP86496 221 aa9.98□□□□□ -0.81
ATXN3-236ENST00000556220 SLC27A5Q9Y2P5 690 aa9.98□□□□□ -0.81
ATXN3-236ENST00000556220 FMNL1O95466 1100 aaPredicted RBP9.97□□□□□ -0.81
ATXN3-236ENST00000556220 ZNF526Q8TF50 670 aaPredicted RBP9.97□□□□□ -0.81
ATXN3-236ENST00000556220 CPSF1Q10570 1443 aaKnown RBP9.97□□□□□ -0.81
ATXN3-236ENST00000556220 TNS2Q63HR2 1409 aa9.97□□□□□ -0.81
ATXN3-236ENST00000556220 SLIT3O75094 1523 aa9.97□□□□□ -0.81
ATXN3-236ENST00000556220 ZNF697Q5TEC3 545 aa9.96□□□□□ -0.82
ATXN3-236ENST00000556220 DNAJC5GQ8N7S2 189 aa9.96□□□□□ -0.82
ATXN3-236ENST00000556220 PAPPAQ13219 1627 aa9.96□□□□□ -0.82
ATXN3-236ENST00000556220 IL2RBP14784 551 aa9.95□□□□□ -0.82
ATXN3-236ENST00000556220 PLA2G2CQ5R387 149 aa9.95□□□□□ -0.82
ATXN3-236ENST00000556220 BRICD5Q6PL45 260 aa9.95□□□□□ -0.82
ATXN3-236ENST00000556220 CD2APQ9Y5K6 639 aa9.95□□□□□ -0.82
ATXN3-236ENST00000556220 ADCY9O60503 1353 aa9.95□□□□□ -0.82
ATXN3-236ENST00000556220 COL18A1P39060 1754 aa9.95□□□□□ -0.82
ATXN3-236ENST00000556220 TOPAZ1Q8N9V7 1692 aa9.94□□□□□ -0.82
ATXN3-236ENST00000556220 TTC21BQ7Z4L5 1316 aa9.94□□□□□ -0.82
ATXN3-236ENST00000556220 CD46P15529 392 aa9.94□□□□□ -0.82
ATXN3-236ENST00000556220 KCNQ4P56696 695 aa9.94□□□□□ -0.82
ATXN3-236ENST00000556220 FAM160A2Q8N612 972 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-236ENST00000556220 NLRP2Q9NX02 1062 aa9.94□□□□□ -0.82
ATXN3-236ENST00000556220 CENPJQ9HC77 1338 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-236ENST00000556220 NBPF1Q3BBV0 1214 aa9.93□□□□□ -0.82
ATXN3-236ENST00000556220 COL23A1Q86Y22 540 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-236ENST00000556220 KAT6BQ8WYB5 2073 aa9.93□□□□□ -0.82
ATXN3-236ENST00000556220 ARHGEF28Q8N1W1 1705 aaKnown RBP9.93□□□□□ -0.82
ATXN3-236ENST00000556220 GDF9O60383 454 aa9.92□□□□□ -0.82
ATXN3-236ENST00000556220 RPIAP49247 311 aa9.92□□□□□ -0.82
ATXN3-236ENST00000556220 COL13A1Q5TAT6 717 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-236ENST00000556220 AKAP12Q02952 1782 aa9.92□□□□□ -0.82
ATXN3-236ENST00000556220 TTC21AQ8NDW8 1320 aa9.91□□□□□ -0.82
ATXN3-236ENST00000556220 NHSQ6T4R5 1651 aa9.91□□□□□ -0.82
ATXN3-236ENST00000556220 DGAT1O75907 488 aa9.91□□□□□ -0.82
ATXN3-236ENST00000556220 Q3C1V9 767 aa9.91□□□□□ -0.82
ATXN3-236ENST00000556220 MSS51Q4VC12 460 aa9.91□□□□□ -0.82
ATXN3-236ENST00000556220 MSL1Q68DK7 614 aa9.91□□□□□ -0.82
ATXN3-236ENST00000556220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.91□□□□□ -0.82
ATXN3-236ENST00000556220 DDX54Q8TDD1 881 aaKnown RBP9.91□□□□□ -0.82
ATXN3-236ENST00000556220 KDM4AO75164 1064 aa9.9□□□□□ -0.82
ATXN3-236ENST00000556220 CD2BP2O95400 341 aaKnown RBP9.9□□□□□ -0.82
ATXN3-236ENST00000556220 MDM2Q00987 491 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-236ENST00000556220 PKDCCQ504Y2 493 aa9.9□□□□□ -0.82
ATXN3-236ENST00000556220 CCDC102AQ96A19 550 aa9.9□□□□□ -0.82
ATXN3-236ENST00000556220 CCNL1Q9UK58 526 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-236ENST00000556220 FCF1Q9Y324 198 aaKnown RBP9.9□□□□□ -0.82
ATXN3-236ENST00000556220 ABCC6O95255 1503 aa9.9□□□□□ -0.82
ATXN3-236ENST00000556220 PCNTO95613 3336 aa9.9□□□□□ -0.83
ATXN3-236ENST00000556220 COL24A1Q17RW2 1714 aa9.9□□□□□ -0.83
ATXN3-236ENST00000556220 TOMM70O94826 608 aa9.89□□□□□ -0.83
ATXN3-236ENST00000556220 PRELPP51888 382 aa9.89□□□□□ -0.83
ATXN3-236ENST00000556220 USP46P62068 366 aa9.89□□□□□ -0.83
ATXN3-236ENST00000556220 ANKRD24Q8TF21 1146 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms