RNA–Protein interactions for RNA: ENST00000556019.2

LINC01588-209, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 3 BASIC

Gene LINC01588, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-209ENST00000556019 CNTNAP1P78357 1384 aa14.19□□□□□ -0.14
LINC01588-209ENST00000556019 GNAT3A8MTJ3 354 aa14.18□□□□□ -0.14
LINC01588-209ENST00000556019 PIP4K2AP48426 406 aaPredicted RBP14.18□□□□□ -0.14
LINC01588-209ENST00000556019 CNBD1Q8NA66 436 aa14.18□□□□□ -0.14
LINC01588-209ENST00000556019 L3MBTL3Q96JM7 780 aaPredicted RBP14.18□□□□□ -0.14
LINC01588-209ENST00000556019 TEX13AQ9BXU3 409 aaPredicted RBP14.18□□□□□ -0.14
LINC01588-209ENST00000556019 SCN4AP35499 1836 aa14.18□□□□□ -0.14
LINC01588-209ENST00000556019 PRAMEF22A3QJZ6 481 aa14.17□□□□□ -0.14
LINC01588-209ENST00000556019 ITGBL1O95965 494 aaPredicted RBP14.17□□□□□ -0.14
LINC01588-209ENST00000556019 TEFQ10587 303 aa14.17□□□□□ -0.14
LINC01588-209ENST00000556019 CC2D1BQ5T0F9 858 aaKnown RBP14.17□□□□□ -0.14
LINC01588-209ENST00000556019 OLFM4Q6UX06 510 aa14.17□□□□□ -0.14
LINC01588-209ENST00000556019 CCER1Q8TC90 406 aaPredicted RBP14.17□□□□□ -0.14
LINC01588-209ENST00000556019 CNKSR1Q969H4 720 aa14.17□□□□□ -0.14
LINC01588-209ENST00000556019 MASTLQ96GX5 879 aa14.17□□□□□ -0.14
LINC01588-209ENST00000556019 PHACTR3Q96KR7 559 aa14.17□□□□□ -0.14
LINC01588-209ENST00000556019 SETDB2Q96T68 719 aa14.17□□□□□ -0.14
LINC01588-209ENST00000556019 TAF1DQ9H5J8 278 aaPredicted RBP14.17□□□□□ -0.14
LINC01588-209ENST00000556019 ZNF541Q9H0D2 1346 aa14.16□□□□□ -0.14
LINC01588-209ENST00000556019 FMNL2Q96PY5 1086 aa14.16□□□□□ -0.14
LINC01588-209ENST00000556019 USP16Q9Y5T5 823 aa14.16□□□□□ -0.14
LINC01588-209ENST00000556019 SNED1Q8TER0 1413 aa14.15□□□□□ -0.14
LINC01588-209ENST00000556019 KLRG2A4D1S0 409 aaPredicted RBP14.15□□□□□ -0.14
LINC01588-209ENST00000556019 DZIP3Q86Y13 1208 aaKnown RBP14.15□□□□□ -0.14
LINC01588-209ENST00000556019 VEGFBP49765 207 aa14.14□□□□□ -0.15
LINC01588-209ENST00000556019 ST5P78524 1137 aa14.14□□□□□ -0.15
LINC01588-209ENST00000556019 LDHDQ86WU2 507 aa14.14□□□□□ -0.15
LINC01588-209ENST00000556019 GAS2L2Q8NHY3 880 aa14.14□□□□□ -0.15
LINC01588-209ENST00000556019 NBPF26B4DH59 902 aa14.13□□□□□ -0.15
LINC01588-209ENST00000556019 U2SURPO15042 1029 aaKnown RBP14.13□□□□□ -0.15
LINC01588-209ENST00000556019 SOGA3Q5TF21 947 aa14.13□□□□□ -0.15
LINC01588-209ENST00000556019 NBPF10Q6P3W6 841 aaKnown RBP14.13□□□□□ -0.15
LINC01588-209ENST00000556019 NBPF15Q8N660 670 aa14.13□□□□□ -0.15
LINC01588-209ENST00000556019 ZNF277Q9NRM2 450 aaPredicted RBP14.13□□□□□ -0.15
LINC01588-209ENST00000556019 COL4A5P29400 1685 aa14.13□□□□□ -0.15
LINC01588-209ENST00000556019 IQCA1LA6NCM1 817 aa14.12□□□□□ -0.15
LINC01588-209ENST00000556019 BTBD11A6QL63 1104 aa14.12□□□□□ -0.15
LINC01588-209ENST00000556019 FKBP4Q02790 459 aaKnown RBP eCLIP14.12□□□□□ -0.15
LINC01588-209ENST00000556019 CCDC93Q567U6 631 aa14.12□□□□□ -0.15
LINC01588-209ENST00000556019 RSPH6AQ9H0K4 717 aa14.12□□□□□ -0.15
LINC01588-209ENST00000556019 PRDM10Q9NQV6 1147 aa14.12□□□□□ -0.15
LINC01588-209ENST00000556019 LTBP1Q14766 1721 aa14.12□□□□□ -0.15
LINC01588-209ENST00000556019 NPC1L1Q9UHC9 1359 aa14.11□□□□□ -0.15
LINC01588-209ENST00000556019 TMEM88BA6NKF7 163 aa14.11□□□□□ -0.15
LINC01588-209ENST00000556019 CLEC4GQ6UXB4 293 aa14.11□□□□□ -0.15
LINC01588-209ENST00000556019 NBPF5PQ86XG9 351 aaPredicted RBP14.11□□□□□ -0.15
LINC01588-209ENST00000556019 WBP1LQ9NX94 342 aa14.11□□□□□ -0.15
LINC01588-209ENST00000556019 FZD9O00144 591 aa14.1□□□□□ -0.15
LINC01588-209ENST00000556019 NPR1P16066 1061 aa14.1□□□□□ -0.15
LINC01588-209ENST00000556019 PRKAR2BP31323 418 aa14.1□□□□□ -0.15
LINC01588-209ENST00000556019 SLC51AQ86UW1 340 aa14.1□□□□□ -0.15
LINC01588-209ENST00000556019 NPHP1O15259 732 aa14.09□□□□□ -0.15
LINC01588-209ENST00000556019 EPHX2P34913 555 aa14.09□□□□□ -0.15
LINC01588-209ENST00000556019 HLFQ16534 295 aa14.09□□□□□ -0.15
LINC01588-209ENST00000556019 EAPPQ56P03 285 aaPredicted RBP14.09□□□□□ -0.15
LINC01588-209ENST00000556019 HACL1Q9UJ83 578 aa14.09□□□□□ -0.15
LINC01588-209ENST00000556019 RNF123Q5XPI4 1314 aa14.09□□□□□ -0.15
LINC01588-209ENST00000556019 RASSF10A6NK89 507 aa14.08□□□□□ -0.16
LINC01588-209ENST00000556019 CTCFP49711 727 aaPredicted RBP14.08□□□□□ -0.16
LINC01588-209ENST00000556019 CNGB1Q14028 1251 aaPredicted RBP14.08□□□□□ -0.16
LINC01588-209ENST00000556019 MAP1SQ66K74 1059 aaPredicted RBP14.08□□□□□ -0.16
LINC01588-209ENST00000556019 MCM10Q7L590 875 aa14.08□□□□□ -0.16
LINC01588-209ENST00000556019 NIP7Q9Y221 180 aaKnown RBP eCLIP14.08□□□□□ -0.16
LINC01588-209ENST00000556019 ABCC12Q96J65 1359 aa14.08□□□□□ -0.16
LINC01588-209ENST00000556019 THSD7BQ9C0I4 1608 aa14.08□□□□□ -0.16
LINC01588-209ENST00000556019 FAM177BA6PVY3 158 aa14.07□□□□□ -0.16
LINC01588-209ENST00000556019 SNRPA1P09661 255 aaKnown RBP14.07□□□□□ -0.16
LINC01588-209ENST00000556019 IARSP41252 1262 aaKnown RBP14.07□□□□□ -0.16
LINC01588-209ENST00000556019 LBX1P52954 281 aa14.07□□□□□ -0.16
LINC01588-209ENST00000556019 FMR1Q06787 632 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINC01588-209ENST00000556019 DCTN1Q14203 1278 aa14.07□□□□□ -0.16
LINC01588-209ENST00000556019 TPTE2Q6XPS3 522 aa14.07□□□□□ -0.16
LINC01588-209ENST00000556019 SYNE4Q8N205 404 aa14.07□□□□□ -0.16
LINC01588-209ENST00000556019 RGL2O15211 777 aa14.06□□□□□ -0.16
LINC01588-209ENST00000556019 HSPA8P11142 646 aaKnown RBP14.06□□□□□ -0.16
LINC01588-209ENST00000556019 CRY2Q49AN0 593 aa14.06□□□□□ -0.16
LINC01588-209ENST00000556019 NPM2Q86SE8 214 aaKnown RBP14.06□□□□□ -0.16
LINC01588-209ENST00000556019 RTKN2Q8IZC4 609 aa14.06□□□□□ -0.16
LINC01588-209ENST00000556019 CNTROBQ8N137 903 aa14.06□□□□□ -0.16
LINC01588-209ENST00000556019 CLEC11AQ9Y240 323 aa14.06□□□□□ -0.16
LINC01588-209ENST00000556019 ZNF652Q9Y2D9 606 aa14.06□□□□□ -0.16
LINC01588-209ENST00000556019 LAMB4A4D0S4 1761 aa14.06□□□□□ -0.16
LINC01588-209ENST00000556019 DEFB115Q30KQ5 88 aa14.05□□□□□ -0.16
LINC01588-209ENST00000556019 GPC2Q8N158 579 aa14.05□□□□□ -0.16
LINC01588-209ENST00000556019 NUP98P52948 1817 aa14.04□□□□□ -0.16
LINC01588-209ENST00000556019 PNMA8AQ86V59 439 aaPredicted RBP14.04□□□□□ -0.16
LINC01588-209ENST00000556019 AIDAQ96BJ3 306 aa14.04□□□□□ -0.16
LINC01588-209ENST00000556019 PSMD1Q99460 953 aa14.04□□□□□ -0.16
LINC01588-209ENST00000556019 WDR33Q9C0J8 1336 aaKnown RBP14.04□□□□□ -0.16
LINC01588-209ENST00000556019 ALDH1B1P30837 517 aa14.03□□□□□ -0.16
LINC01588-209ENST00000556019 SCNN1DP51172 638 aa14.03□□□□□ -0.16
LINC01588-209ENST00000556019 NUTM1Q86Y26 1132 aa14.03□□□□□ -0.16
LINC01588-209ENST00000556019 DDX21Q9NR30 783 aaKnown RBP eCLIP14.03□□□□□ -0.16
LINC01588-209ENST00000556019 MIS18AQ9NYP9 233 aa14.03□□□□□ -0.16
LINC01588-209ENST00000556019 KDM3BQ7LBC6 1761 aa14.03□□□□□ -0.16
LINC01588-209ENST00000556019 EPS15P42566 896 aa14.02□□□□□ -0.17
LINC01588-209ENST00000556019 ABHD8Q96I13 439 aa14.02□□□□□ -0.17
LINC01588-209ENST00000556019 RIC1Q4ADV7 1423 aa14.01□□□□□ -0.17
LINC01588-209ENST00000556019 UBN2Q6ZU65 1347 aa14.01□□□□□ -0.17
LINC01588-209ENST00000556019 HOXA10P31260 410 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms