RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 CLEC4GQ6UXB4 293 aa22.62■■□□□ 1.21
XRCC3-215ENST00000555964 PHACTR3Q96KR7 559 aa22.62■■□□□ 1.21
XRCC3-215ENST00000555964 TAOK3Q9H2K8 898 aa22.62■■□□□ 1.21
XRCC3-215ENST00000555964 SNRPA1P09661 255 aaKnown RBP22.61■■□□□ 1.21
XRCC3-215ENST00000555964 U2AF1L5P0DN76 240 aaPredicted RBP22.61■■□□□ 1.21
XRCC3-215ENST00000555964 HTRA3P83110 453 aa22.61■■□□□ 1.21
XRCC3-215ENST00000555964 U2AF1Q01081 240 aaKnown RBP eCLIP22.61■■□□□ 1.21
XRCC3-215ENST00000555964 MASTLQ96GX5 879 aa22.61■■□□□ 1.21
XRCC3-215ENST00000555964 SLX4Q8IY92 1834 aa22.61■■□□□ 1.21
XRCC3-215ENST00000555964 RGL2O15211 777 aa22.6■■□□□ 1.21
XRCC3-215ENST00000555964 HTATSF1O43719 755 aaKnown RBP22.59■■□□□ 1.21
XRCC3-215ENST00000555964 NBPF5PQ86XG9 351 aaPredicted RBP22.59■■□□□ 1.21
XRCC3-215ENST00000555964 KCNQ3O43525 872 aa22.58■■□□□ 1.21
XRCC3-215ENST00000555964 SRGNP10124 158 aa22.58■■□□□ 1.21
XRCC3-215ENST00000555964 PRPF40BQ6NWY9 871 aaKnown RBP22.58■■□□□ 1.21
XRCC3-215ENST00000555964 ZNF219Q9P2Y4 722 aaPredicted RBP22.58■■□□□ 1.21
XRCC3-215ENST00000555964 NEFMP07197 916 aa22.57■■□□□ 1.2
XRCC3-215ENST00000555964 CCDC24Q8N4L8 307 aa22.57■■□□□ 1.2
XRCC3-215ENST00000555964 USP16Q9Y5T5 823 aa22.57■■□□□ 1.2
XRCC3-215ENST00000555964 LAMB4A4D0S4 1761 aa22.57■■□□□ 1.2
XRCC3-215ENST00000555964 PPP2R1AP30153 589 aa22.55■■□□□ 1.2
XRCC3-215ENST00000555964 MCM10Q7L590 875 aa22.55■■□□□ 1.2
XRCC3-215ENST00000555964 TPTE2Q6XPS3 522 aa22.54■■□□□ 1.2
XRCC3-215ENST00000555964 SCN4AP35499 1836 aa22.54■■□□□ 1.2
XRCC3-215ENST00000555964 NPR1P16066 1061 aa22.53■■□□□ 1.2
XRCC3-215ENST00000555964 CCDC93Q567U6 631 aa22.53■■□□□ 1.2
XRCC3-215ENST00000555964 IQCA1LA6NCM1 817 aa22.52■■□□□ 1.2
XRCC3-215ENST00000555964 NIP7Q9Y221 180 aaKnown RBP eCLIP22.52■■□□□ 1.2
XRCC3-215ENST00000555964 DLG5Q8TDM6 1919 aa22.51■■□□□ 1.19
XRCC3-215ENST00000555964 POTECB2RU33 542 aa22.51■■□□□ 1.19
XRCC3-215ENST00000555964 PIP4K2AP48426 406 aaPredicted RBP22.51■■□□□ 1.19
XRCC3-215ENST00000555964 TAF7Q15545 349 aaPredicted RBP22.51■■□□□ 1.19
XRCC3-215ENST00000555964 PRAMEF22A3QJZ6 481 aa22.5■■□□□ 1.19
XRCC3-215ENST00000555964 CHADLQ6NUI6 762 aa22.5■■□□□ 1.19
XRCC3-215ENST00000555964 PNISRQ8TF01 805 aaKnown RBP22.5■■□□□ 1.19
XRCC3-215ENST00000555964 KDM3BQ7LBC6 1761 aa22.48■■□□□ 1.19
XRCC3-215ENST00000555964 KLRG2A4D1S0 409 aaPredicted RBP22.48■■□□□ 1.19
XRCC3-215ENST00000555964 GTF2E1P29083 439 aaPredicted RBP22.48■■□□□ 1.19
XRCC3-215ENST00000555964 RTKN2Q8IZC4 609 aa22.48■■□□□ 1.19
XRCC3-215ENST00000555964 ALDH1B1P30837 517 aa22.47■■□□□ 1.19
XRCC3-215ENST00000555964 FKBP4Q02790 459 aaKnown RBP eCLIP22.47■■□□□ 1.19
XRCC3-215ENST00000555964 DCTN1Q14203 1278 aa22.47■■□□□ 1.19
XRCC3-215ENST00000555964 NYXQ9GZU5 481 aa22.47■■□□□ 1.19
XRCC3-215ENST00000555964 CREBZFQ9NS37 354 aa22.47■■□□□ 1.19
XRCC3-215ENST00000555964 NUP98P52948 1817 aa22.47■■□□□ 1.19
XRCC3-215ENST00000555964 NBPF26B4DH59 902 aa22.46■■□□□ 1.19
XRCC3-215ENST00000555964 DDNO94850 711 aaPredicted RBP22.46■■□□□ 1.19
XRCC3-215ENST00000555964 NBPF10Q6P3W6 841 aaKnown RBP22.46■■□□□ 1.19
XRCC3-215ENST00000555964 NBPF15Q8N660 670 aa22.46■■□□□ 1.19
XRCC3-215ENST00000555964 C7orf43Q8WVR3 580 aa22.46■■□□□ 1.19
XRCC3-215ENST00000555964 L3MBTL3Q96JM7 780 aaPredicted RBP22.46■■□□□ 1.19
XRCC3-215ENST00000555964 COL13A1Q5TAT6 717 aaPredicted RBP22.45■■□□□ 1.18
XRCC3-215ENST00000555964 LDHDQ86WU2 507 aa22.45■■□□□ 1.18
XRCC3-215ENST00000555964 PNNQ9H307 717 aaKnown RBP22.45■■□□□ 1.18
XRCC3-215ENST00000555964 HSPA1AP0DMV8 641 aaKnown RBP22.44■■□□□ 1.18
XRCC3-215ENST00000555964 HSPA1BP0DMV9 641 aaKnown RBP22.44■■□□□ 1.18
XRCC3-215ENST00000555964 ERVV-1B6SEH8 477 aa22.43■■□□□ 1.18
XRCC3-215ENST00000555964 KIF6Q6ZMV9 814 aa22.43■■□□□ 1.18
XRCC3-215ENST00000555964 TNS4Q8IZW8 715 aa22.43■■□□□ 1.18
XRCC3-215ENST00000555964 FAM177BA6PVY3 158 aa22.42■■□□□ 1.18
XRCC3-215ENST00000555964 IBTKQ9P2D0 1353 aaPredicted RBP22.41■■□□□ 1.18
XRCC3-215ENST00000555964 CC2D2BQ6DHV5 1058 aa22.41■■□□□ 1.18
XRCC3-215ENST00000555964 TAF1DQ9H5J8 278 aaPredicted RBP22.41■■□□□ 1.18
XRCC3-215ENST00000555964 ZNF277Q9NRM2 450 aaPredicted RBP22.41■■□□□ 1.18
XRCC3-215ENST00000555964 MAP3K15Q6ZN16 1313 aa22.4■■□□□ 1.18
XRCC3-215ENST00000555964 MAPK8IP3Q9UPT6 1336 aa22.4■■□□□ 1.18
XRCC3-215ENST00000555964 HLFQ16534 295 aa22.4■■□□□ 1.18
XRCC3-215ENST00000555964 GRIPAP1Q4V328 841 aa22.4■■□□□ 1.18
XRCC3-215ENST00000555964 PCNTO95613 3336 aa22.4■■□□□ 1.18
XRCC3-215ENST00000555964 RIC1Q4ADV7 1423 aa22.4■■□□□ 1.18
XRCC3-215ENST00000555964 IARSP41252 1262 aaKnown RBP22.39■■□□□ 1.17
XRCC3-215ENST00000555964 MIS18AQ9NYP9 233 aa22.39■■□□□ 1.17
XRCC3-215ENST00000555964 HACL1Q9UJ83 578 aa22.39■■□□□ 1.17
XRCC3-215ENST00000555964 ERBB4Q15303 1308 aa22.38■■□□□ 1.17
XRCC3-215ENST00000555964 NFE2L2Q16236 605 aa22.38■■□□□ 1.17
XRCC3-215ENST00000555964 CRY2Q49AN0 593 aa22.38■■□□□ 1.17
XRCC3-215ENST00000555964 JDP2Q8WYK2 163 aa22.38■■□□□ 1.17
XRCC3-215ENST00000555964 RPGRQ92834 1020 aaKnown RBP22.38■■□□□ 1.17
XRCC3-215ENST00000555964 POTEIP0CG38 1075 aa22.37■■□□□ 1.17
XRCC3-215ENST00000555964 POTEJP0CG39 1038 aa22.37■■□□□ 1.17
XRCC3-215ENST00000555964 EIF4A1P60842 406 aaKnown RBP22.37■■□□□ 1.17
XRCC3-215ENST00000555964 PNMA8AQ86V59 439 aaPredicted RBP22.37■■□□□ 1.17
XRCC3-215ENST00000555964 SYNE4Q8N205 404 aa22.37■■□□□ 1.17
XRCC3-215ENST00000555964 NGEFQ8N5V2 710 aa22.37■■□□□ 1.17
XRCC3-215ENST00000555964 PSMD1Q99460 953 aa22.37■■□□□ 1.17
XRCC3-215ENST00000555964 PASKQ96RG2 1323 aa22.36■■□□□ 1.17
XRCC3-215ENST00000555964 ZNF541Q9H0D2 1346 aa22.36■■□□□ 1.17
XRCC3-215ENST00000555964 EAPPQ56P03 285 aaPredicted RBP22.36■■□□□ 1.17
XRCC3-215ENST00000555964 RRP7AQ9Y3A4 280 aaKnown RBP22.36■■□□□ 1.17
XRCC3-215ENST00000555964 ABCC12Q96J65 1359 aa22.36■■□□□ 1.17
XRCC3-215ENST00000555964 FZD9O00144 591 aa22.35■■□□□ 1.17
XRCC3-215ENST00000555964 EPHX2P34913 555 aa22.35■■□□□ 1.17
XRCC3-215ENST00000555964 GPC2Q8N158 579 aa22.35■■□□□ 1.17
XRCC3-215ENST00000555964 PLEKHF1Q96S99 279 aa22.35■■□□□ 1.17
XRCC3-215ENST00000555964 MKRN1Q9UHC7 482 aaKnown RBP22.35■■□□□ 1.17
XRCC3-215ENST00000555964 CNTNAP1P78357 1384 aa22.35■■□□□ 1.17
XRCC3-215ENST00000555964 NUTM1Q86Y26 1132 aa22.34■■□□□ 1.17
XRCC3-215ENST00000555964 CLEC11AQ9Y240 323 aa22.34■■□□□ 1.17
XRCC3-215ENST00000555964 ADAMTSL1Q8N6G6 1762 aa22.34■■□□□ 1.17
XRCC3-215ENST00000555964 TMEM88BA6NKF7 163 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms