RNA–Protein interactions for RNA: ENST00000555801.1

LINC00640-202, long intergenic non-protein coding RNA 640, humanhuman

TSL 3

Gene LINC00640, Length 392 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-202ENST00000555801 TLL2Q9Y6L7 1015 aa6.11□□□□□ -1.43
LINC00640-202ENST00000555801 USP31Q70CQ4 1352 aa6.1□□□□□ -1.43
LINC00640-202ENST00000555801 ZNF541Q9H0D2 1346 aa6.1□□□□□ -1.43
LINC00640-202ENST00000555801 RFC4P35249 363 aa6.1□□□□□ -1.43
LINC00640-202ENST00000555801 ATP6V1AP38606 617 aa6.1□□□□□ -1.43
LINC00640-202ENST00000555801 TRIM26Q12899 539 aaPredicted RBP6.1□□□□□ -1.43
LINC00640-202ENST00000555801 BICDL1Q6ZP65 573 aa6.1□□□□□ -1.43
LINC00640-202ENST00000555801 C3orf67Q6ZVT6 689 aa6.1□□□□□ -1.43
LINC00640-202ENST00000555801 TTLL6Q8N841 843 aa6.1□□□□□ -1.43
LINC00640-202ENST00000555801 ZNF408Q9H9D4 720 aa6.1□□□□□ -1.43
LINC00640-202ENST00000555801 PRDM6Q9NQX0 595 aa6.1□□□□□ -1.43
LINC00640-202ENST00000555801 RTCBQ9Y3I0 505 aaKnown RBP6.1□□□□□ -1.43
LINC00640-202ENST00000555801 NFAT5O94916 1531 aa6.09□□□□□ -1.43
LINC00640-202ENST00000555801 CGNL1Q0VF96 1302 aa6.09□□□□□ -1.43
LINC00640-202ENST00000555801 C2CD5Q86YS7 1000 aa6.09□□□□□ -1.43
LINC00640-202ENST00000555801 TMC1Q8TDI8 760 aa6.09□□□□□ -1.43
LINC00640-202ENST00000555801 IP6K1Q92551 441 aa6.09□□□□□ -1.43
LINC00640-202ENST00000555801 TERF2IPQ9NYB0 399 aa6.09□□□□□ -1.43
LINC00640-202ENST00000555801 COL6A3P12111 3177 aa6.08□□□□□ -1.44
LINC00640-202ENST00000555801 H0YGN5 161 aa6.08□□□□□ -1.44
LINC00640-202ENST00000555801 CELF2O95319 508 aaKnown RBP6.08□□□□□ -1.44
LINC00640-202ENST00000555801 AMPHP49418 695 aa6.08□□□□□ -1.44
LINC00640-202ENST00000555801 SAPCD2Q86UD0 394 aa6.08□□□□□ -1.44
LINC00640-202ENST00000555801 NME9Q86XW9 330 aa6.08□□□□□ -1.44
LINC00640-202ENST00000555801 USHBP1Q8N6Y0 703 aa6.08□□□□□ -1.44
LINC00640-202ENST00000555801 RAPGEF4Q8WZA2 1011 aa6.08□□□□□ -1.44
LINC00640-202ENST00000555801 PIGBQ92521 554 aa6.08□□□□□ -1.44
LINC00640-202ENST00000555801 SMARCC1Q92922 1105 aaPredicted RBP6.08□□□□□ -1.44
LINC00640-202ENST00000555801 ZNF622Q969S3 477 aaKnown RBP eCLIP6.08□□□□□ -1.44
LINC00640-202ENST00000555801 L3MBTL3Q96JM7 780 aaPredicted RBP6.08□□□□□ -1.44
LINC00640-202ENST00000555801 RNF186Q9NXI6 227 aa6.08□□□□□ -1.44
LINC00640-202ENST00000555801 RBM27Q9P2N5 1060 aaKnown RBP6.08□□□□□ -1.44
LINC00640-202ENST00000555801 HDAC9Q9UKV0 1011 aa6.08□□□□□ -1.44
LINC00640-202ENST00000555801 ROCK2O75116 1388 aaKnown RBP6.07□□□□□ -1.44
LINC00640-202ENST00000555801 SLC24A1O60721 1099 aa6.07□□□□□ -1.44
LINC00640-202ENST00000555801 TATP17735 454 aaPredicted RBP6.07□□□□□ -1.44
LINC00640-202ENST00000555801 RASEFQ8IZ41 740 aa6.07□□□□□ -1.44
LINC00640-202ENST00000555801 LRCH3Q96II8 777 aa6.07□□□□□ -1.44
LINC00640-202ENST00000555801 COG3Q96JB2 828 aa6.07□□□□□ -1.44
LINC00640-202ENST00000555801 TAOK3Q9H2K8 898 aa6.07□□□□□ -1.44
LINC00640-202ENST00000555801 ASAP1Q9ULH1 1129 aa6.07□□□□□ -1.44
LINC00640-202ENST00000555801 EDC4Q6P2E9 1401 aaKnown RBP6.07□□□□□ -1.44
LINC00640-202ENST00000555801 SMG6Q86US8 1419 aaKnown RBP6.07□□□□□ -1.44
LINC00640-202ENST00000555801 ADAMTSL1Q8N6G6 1762 aa6.06□□□□□ -1.44
LINC00640-202ENST00000555801 PCDH11XQ9BZA7 1347 aa6.06□□□□□ -1.44
LINC00640-202ENST00000555801 PCDH11YQ9BZA8 1340 aa6.06□□□□□ -1.44
LINC00640-202ENST00000555801 MKI67P46013 3256 aaKnown RBP6.06□□□□□ -1.44
LINC00640-202ENST00000555801 POLRMTO00411 1230 aaKnown RBP6.06□□□□□ -1.44
LINC00640-202ENST00000555801 EN2P19622 333 aaPredicted RBP6.06□□□□□ -1.44
LINC00640-202ENST00000555801 KIF23Q02241 960 aaPredicted RBP6.06□□□□□ -1.44
LINC00640-202ENST00000555801 AKAP4Q5JQC9 854 aa6.06□□□□□ -1.44
LINC00640-202ENST00000555801 PNMA8AQ86V59 439 aaPredicted RBP6.06□□□□□ -1.44
LINC00640-202ENST00000555801 IFNL1Q8IU54 200 aa6.06□□□□□ -1.44
LINC00640-202ENST00000555801 FAM122AQ96E09 287 aa6.06□□□□□ -1.44
LINC00640-202ENST00000555801 CEP290O15078 2479 aa6.06□□□□□ -1.44
LINC00640-202ENST00000555801 SCN4AP35499 1836 aa6.05□□□□□ -1.44
LINC00640-202ENST00000555801 SOX1O00570 391 aaPredicted RBP6.05□□□□□ -1.44
LINC00640-202ENST00000555801 HOXC9P31274 260 aa6.05□□□□□ -1.44
LINC00640-202ENST00000555801 PLA2G5P39877 138 aa6.05□□□□□ -1.44
LINC00640-202ENST00000555801 NOGQ13253 232 aa6.05□□□□□ -1.44
LINC00640-202ENST00000555801 GJA3Q9Y6H8 435 aa6.05□□□□□ -1.44
LINC00640-202ENST00000555801 CARMIL3Q8ND23 1372 aa6.05□□□□□ -1.44
LINC00640-202ENST00000555801 SBNO2Q9Y2G9 1366 aa6.05□□□□□ -1.44
LINC00640-202ENST00000555801 DICER1Q9UPY3 1922 aaKnown RBP6.04□□□□□ -1.44
LINC00640-202ENST00000555801 H0YIN7 160 aa6.04□□□□□ -1.44
LINC00640-202ENST00000555801 EPS15P42566 896 aa6.04□□□□□ -1.44
LINC00640-202ENST00000555801 DLK2Q6UY11 383 aa6.04□□□□□ -1.44
LINC00640-202ENST00000555801 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.04□□□□□ -1.44
LINC00640-202ENST00000555801 SNX27Q96L92 541 aa6.04□□□□□ -1.44
LINC00640-202ENST00000555801 GLIS2Q9BZE0 524 aaPredicted RBP6.04□□□□□ -1.44
LINC00640-202ENST00000555801 RTL1A6NKG5 1358 aa6.04□□□□□ -1.44
LINC00640-202ENST00000555801 SCN11AQ9UI33 1791 aa6.03□□□□□ -1.44
LINC00640-202ENST00000555801 MAP3K19Q56UN5 1328 aa6.03□□□□□ -1.44
LINC00640-202ENST00000555801 SPDYE4A6NLX3 237 aa6.03□□□□□ -1.44
LINC00640-202ENST00000555801 RPS6KA4O75676 772 aa6.03□□□□□ -1.44
LINC00640-202ENST00000555801 TBC1D8O95759 1140 aa6.03□□□□□ -1.44
LINC00640-202ENST00000555801 HOXB1P14653 301 aaPredicted RBP6.03□□□□□ -1.44
LINC00640-202ENST00000555801 HUNKP57058 714 aa6.03□□□□□ -1.44
LINC00640-202ENST00000555801 Q7L0L9 218 aa6.03□□□□□ -1.44
LINC00640-202ENST00000555801 ZNF296Q8WUU4 475 aaPredicted RBP6.03□□□□□ -1.44
LINC00640-202ENST00000555801 L3MBTL2Q969R5 705 aa6.03□□□□□ -1.44
LINC00640-202ENST00000555801 PUS7Q96PZ0 661 aaKnown RBP6.03□□□□□ -1.44
LINC00640-202ENST00000555801 SLC12A5Q9H2X9 1139 aa6.03□□□□□ -1.44
LINC00640-202ENST00000555801 ZNF277Q9NRM2 450 aaPredicted RBP6.03□□□□□ -1.44
LINC00640-202ENST00000555801 MAP2P11137 1827 aaKnown RBP6.03□□□□□ -1.44
LINC00640-202ENST00000555801 CYP27B1O15528 508 aa6.02□□□□□ -1.45
LINC00640-202ENST00000555801 FBLN1P23142 703 aa6.02□□□□□ -1.45
LINC00640-202ENST00000555801 TM4SF1P30408 202 aa6.02□□□□□ -1.45
LINC00640-202ENST00000555801 PKN2Q16513 984 aaKnown RBP6.02□□□□□ -1.45
LINC00640-202ENST00000555801 VARS2Q5ST30 1063 aaKnown RBP6.02□□□□□ -1.45
LINC00640-202ENST00000555801 FBXO46Q6PJ61 603 aaPredicted RBP6.02□□□□□ -1.45
LINC00640-202ENST00000555801 SLC4A9Q96Q91 983 aa6.02□□□□□ -1.45
LINC00640-202ENST00000555801 CARD11Q9BXL7 1154 aa6.02□□□□□ -1.45
LINC00640-202ENST00000555801 SAGE1Q9NXZ1 904 aa6.02□□□□□ -1.45
LINC00640-202ENST00000555801 TMOD3Q9NYL9 352 aa6.02□□□□□ -1.45
LINC00640-202ENST00000555801 SPG7Q9UQ90 795 aa6.02□□□□□ -1.45
LINC00640-202ENST00000555801 A0A1W2PP64 1363 aa6.02□□□□□ -1.45
LINC00640-202ENST00000555801 TRPM7Q96QT4 1865 aa6.02□□□□□ -1.45
LINC00640-202ENST00000555801 KIAA0100Q14667 2235 aaKnown RBP6.02□□□□□ -1.45
LINC00640-202ENST00000555801 USP42Q9H9J4 1324 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms