RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 ST18O60284 1047 aa8.33□□□□□ -1.08
NEK9-207ENST00000555763 TRIM26Q12899 539 aaPredicted RBP8.33□□□□□ -1.08
NEK9-207ENST00000555763 PDAP1Q13442 181 aaKnown RBP8.33□□□□□ -1.08
NEK9-207ENST00000555763 DPY19L2Q6NUT2 758 aa8.33□□□□□ -1.08
NEK9-207ENST00000555763 NLGN1Q8N2Q7 840 aa8.33□□□□□ -1.08
NEK9-207ENST00000555763 NBPF15Q8N660 670 aa8.33□□□□□ -1.08
NEK9-207ENST00000555763 CAPNS2Q96L46 248 aa8.33□□□□□ -1.08
NEK9-207ENST00000555763 PAPPA2Q9BXP8 1791 aa8.33□□□□□ -1.08
NEK9-207ENST00000555763 SPTBN5Q9NRC6 3674 aaKnown RBP8.32□□□□□ -1.08
NEK9-207ENST00000555763 CHRNA5P30532 468 aa8.32□□□□□ -1.08
NEK9-207ENST00000555763 TRPC6Q9Y210 931 aa8.32□□□□□ -1.08
NEK9-207ENST00000555763 USP31Q70CQ4 1352 aa8.32□□□□□ -1.08
NEK9-207ENST00000555763 SLX4Q8IY92 1834 aa8.31□□□□□ -1.08
NEK9-207ENST00000555763 SMG6Q86US8 1419 aaKnown RBP8.31□□□□□ -1.08
NEK9-207ENST00000555763 GYS1P13807 737 aa8.31□□□□□ -1.08
NEK9-207ENST00000555763 ECE1P42892 770 aa8.31□□□□□ -1.08
NEK9-207ENST00000555763 TMF1P82094 1093 aa8.31□□□□□ -1.08
NEK9-207ENST00000555763 ZCRB1Q8TBF4 217 aaKnown RBP8.31□□□□□ -1.08
NEK9-207ENST00000555763 GPR101Q96P66 508 aaPredicted RBP8.31□□□□□ -1.08
NEK9-207ENST00000555763 RSPH6AQ9H0K4 717 aa8.31□□□□□ -1.08
NEK9-207ENST00000555763 COLQQ9Y215 455 aaPredicted RBP8.31□□□□□ -1.08
NEK9-207ENST00000555763 PARP3Q9Y6F1 533 aa8.31□□□□□ -1.08
NEK9-207ENST00000555763 TJP1Q07157 1748 aa8.31□□□□□ -1.08
NEK9-207ENST00000555763 PPP1R37O75864 691 aa8.3□□□□□ -1.08
NEK9-207ENST00000555763 SRPK2P78362 688 aaKnown RBP8.3□□□□□ -1.08
NEK9-207ENST00000555763 SMYD5Q6GMV2 418 aa8.3□□□□□ -1.08
NEK9-207ENST00000555763 SMARCC1Q92922 1105 aaPredicted RBP8.3□□□□□ -1.08
NEK9-207ENST00000555763 L3MBTL3Q96JM7 780 aaPredicted RBP8.3□□□□□ -1.08
NEK9-207ENST00000555763 TAF1DQ9H5J8 278 aaPredicted RBP8.3□□□□□ -1.08
NEK9-207ENST00000555763 CABP1Q9NZU7 370 aa8.3□□□□□ -1.08
NEK9-207ENST00000555763 ABT1Q9ULW3 272 aaKnown RBP8.3□□□□□ -1.08
NEK9-207ENST00000555763 KDRP35968 1356 aa8.3□□□□□ -1.08
NEK9-207ENST00000555763 IQCA1LA6NCM1 817 aa8.29□□□□□ -1.08
NEK9-207ENST00000555763 MAP2K2P36507 400 aa8.29□□□□□ -1.08
NEK9-207ENST00000555763 ITPK1Q13572 414 aa8.29□□□□□ -1.08
NEK9-207ENST00000555763 CYP4F22Q6NT55 531 aa8.29□□□□□ -1.08
NEK9-207ENST00000555763 SLC17A8Q8NDX2 589 aa8.29□□□□□ -1.08
NEK9-207ENST00000555763 CABP2Q9NPB3 220 aa8.29□□□□□ -1.08
NEK9-207ENST00000555763 BMP2KQ9NSY1 1161 aaPredicted RBP8.29□□□□□ -1.08
NEK9-207ENST00000555763 CD163L1Q9NR16 1453 aa8.29□□□□□ -1.08
NEK9-207ENST00000555763 INSRP06213 1382 aa8.28□□□□□ -1.08
NEK9-207ENST00000555763 LOC102724428A0A0B4J2F2 783 aa8.28□□□□□ -1.08
NEK9-207ENST00000555763 DDNO94850 711 aaPredicted RBP8.28□□□□□ -1.08
NEK9-207ENST00000555763 SIK1P57059 783 aa8.28□□□□□ -1.08
NEK9-207ENST00000555763 DDR1Q08345 913 aa8.28□□□□□ -1.08
NEK9-207ENST00000555763 AOC2O75106 756 aa8.27□□□□□ -1.09
NEK9-207ENST00000555763 MPRIPQ6WCQ1 1025 aa8.27□□□□□ -1.09
NEK9-207ENST00000555763 IL27Q8NEV9 243 aa8.27□□□□□ -1.09
NEK9-207ENST00000555763 PCDHB8Q9UN66 801 aa8.27□□□□□ -1.09
NEK9-207ENST00000555763 PCDHB13Q9Y5F0 798 aa8.27□□□□□ -1.09
NEK9-207ENST00000555763 CGNL1Q0VF96 1302 aa8.27□□□□□ -1.09
NEK9-207ENST00000555763 MUC3AQ02505 3323 aa8.26□□□□□ -1.09
NEK9-207ENST00000555763 ANKRD26Q9UPS8 1709 aa8.26□□□□□ -1.09
NEK9-207ENST00000555763 NBPF1Q3BBV0 1214 aa8.26□□□□□ -1.09
NEK9-207ENST00000555763 ERFEQ4G0M1 354 aa8.26□□□□□ -1.09
NEK9-207ENST00000555763 TRAPPC3LQ5T215 181 aa8.26□□□□□ -1.09
NEK9-207ENST00000555763 DDX21Q9NR30 783 aaKnown RBP eCLIP8.26□□□□□ -1.09
NEK9-207ENST00000555763 PCDH11XQ9BZA7 1347 aa8.26□□□□□ -1.09
NEK9-207ENST00000555763 PCDH11YQ9BZA8 1340 aa8.26□□□□□ -1.09
NEK9-207ENST00000555763 LTBP3Q9NS15 1303 aa8.26□□□□□ -1.09
NEK9-207ENST00000555763 POLR2AP24928 1970 aaKnown RBP8.25□□□□□ -1.09
NEK9-207ENST00000555763 PSEN1P49768 467 aa8.25□□□□□ -1.09
NEK9-207ENST00000555763 GRM1Q13255 1194 aa8.25□□□□□ -1.09
NEK9-207ENST00000555763 MAP1SQ66K74 1059 aaPredicted RBP8.25□□□□□ -1.09
NEK9-207ENST00000555763 CNTROBQ8N137 903 aa8.25□□□□□ -1.09
NEK9-207ENST00000555763 FBXO22Q8NEZ5 403 aa8.25□□□□□ -1.09
NEK9-207ENST00000555763 TSPYL2Q9H2G4 693 aaPredicted RBP8.25□□□□□ -1.09
NEK9-207ENST00000555763 KDM4CQ9H3R0 1056 aa8.25□□□□□ -1.09
NEK9-207ENST00000555763 RTCBQ9Y3I0 505 aaKnown RBP8.25□□□□□ -1.09
NEK9-207ENST00000555763 EAPPQ56P03 285 aaPredicted RBP8.24□□□□□ -1.09
NEK9-207ENST00000555763 TLL2Q9Y6L7 1015 aa8.24□□□□□ -1.09
NEK9-207ENST00000555763 MAP3K19Q56UN5 1328 aa8.24□□□□□ -1.09
NEK9-207ENST00000555763 KTN1Q86UP2 1357 aaKnown RBP8.23□□□□□ -1.09
NEK9-207ENST00000555763 POLRMTO00411 1230 aaKnown RBP8.23□□□□□ -1.09
NEK9-207ENST00000555763 TTLL6Q8N841 843 aa8.23□□□□□ -1.09
NEK9-207ENST00000555763 PIGBQ92521 554 aa8.23□□□□□ -1.09
NEK9-207ENST00000555763 IP6K1Q92551 441 aa8.23□□□□□ -1.09
NEK9-207ENST00000555763 MPHOSPH9Q99550 1183 aa8.23□□□□□ -1.09
NEK9-207ENST00000555763 ARID3AQ99856 593 aa8.23□□□□□ -1.09
NEK9-207ENST00000555763 SCN7AQ01118 1682 aa8.23□□□□□ -1.09
NEK9-207ENST00000555763 CNTNAP4Q9C0A0 1308 aa8.23□□□□□ -1.09
NEK9-207ENST00000555763 RFC4P35249 363 aa8.22□□□□□ -1.09
NEK9-207ENST00000555763 ATP6V1AP38606 617 aa8.22□□□□□ -1.09
NEK9-207ENST00000555763 GPIHBP1Q8IV16 184 aa8.22□□□□□ -1.09
NEK9-207ENST00000555763 SLAIN1Q8ND83 568 aa8.22□□□□□ -1.09
NEK9-207ENST00000555763 LARP6Q9BRS8 491 aaKnown RBP8.22□□□□□ -1.09
NEK9-207ENST00000555763 C1orf115Q9H7X2 142 aa8.22□□□□□ -1.09
NEK9-207ENST00000555763 HPS5Q9UPZ3 1129 aa8.22□□□□□ -1.09
NEK9-207ENST00000555763 ARIH1Q9Y4X5 557 aaPredicted RBP8.22□□□□□ -1.09
NEK9-207ENST00000555763 USP42Q9H9J4 1324 aaKnown RBP8.22□□□□□ -1.09
NEK9-207ENST00000555763 CENPJQ9HC77 1338 aaPredicted RBP8.22□□□□□ -1.09
NEK9-207ENST00000555763 TTC28Q96AY4 2481 aa8.22□□□□□ -1.09
NEK9-207ENST00000555763 CARMIL3Q8ND23 1372 aa8.22□□□□□ -1.09
NEK9-207ENST00000555763 SBNO2Q9Y2G9 1366 aa8.22□□□□□ -1.09
NEK9-207ENST00000555763 CYP27B1O15528 508 aa8.21□□□□□ -1.1
NEK9-207ENST00000555763 EPHX2P34913 555 aa8.21□□□□□ -1.1
NEK9-207ENST00000555763 FMR1Q06787 632 aaKnown RBP eCLIP8.21□□□□□ -1.1
NEK9-207ENST00000555763 MFSD10Q14728 455 aa8.21□□□□□ -1.1
NEK9-207ENST00000555763 RC3H1Q5TC82 1133 aaKnown RBP8.21□□□□□ -1.1
NEK9-207ENST00000555763 CIAPIN1Q6FI81 312 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms