RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 TTLL7Q6ZT98 887 aa22.72■■□□□ 1.23
GABRB3-209ENST00000555632 NUTM1Q86Y26 1132 aa22.72■■□□□ 1.23
GABRB3-209ENST00000555632 TBC1D2Q9BYX2 928 aa22.72■■□□□ 1.23
GABRB3-209ENST00000555632 PLCH1Q4KWH8 1693 aa22.71■■□□□ 1.23
GABRB3-209ENST00000555632 ARFGEF2Q9Y6D5 1785 aa22.7■■□□□ 1.23
GABRB3-209ENST00000555632 RAB11FIP3O75154 756 aa22.7■■□□□ 1.23
GABRB3-209ENST00000555632 EPHA10Q5JZY3 1008 aa22.7■■□□□ 1.23
GABRB3-209ENST00000555632 ATG3Q9NT62 314 aa22.69■■□□□ 1.22
GABRB3-209ENST00000555632 ITGB4P16144 1822 aa22.69■■□□□ 1.22
GABRB3-209ENST00000555632 EXOC5O00471 708 aa22.69■■□□□ 1.22
GABRB3-209ENST00000555632 TOM1O60784 492 aa22.69■■□□□ 1.22
GABRB3-209ENST00000555632 PLBD2Q8NHP8 589 aa22.69■■□□□ 1.22
GABRB3-209ENST00000555632 KIF2CQ99661 725 aa22.69■■□□□ 1.22
GABRB3-209ENST00000555632 KIF1BPQ96EK5 621 aa22.68■■□□□ 1.22
GABRB3-209ENST00000555632 STAP2Q9UGK3 403 aa22.68■■□□□ 1.22
GABRB3-209ENST00000555632 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.67■■□□□ 1.22
GABRB3-209ENST00000555632 TUBGCP6Q96RT7 1819 aa22.67■■□□□ 1.22
GABRB3-209ENST00000555632 ERBB4Q15303 1308 aa22.67■■□□□ 1.22
GABRB3-209ENST00000555632 BECN1Q14457 450 aa22.67■■□□□ 1.22
GABRB3-209ENST00000555632 UNC5CLQ8IV45 518 aa22.67■■□□□ 1.22
GABRB3-209ENST00000555632 KLHDC4Q8TBB5 520 aa22.66■■□□□ 1.22
GABRB3-209ENST00000555632 SPATA31A1Q5TZJ5 1347 aa22.66■■□□□ 1.22
GABRB3-209ENST00000555632 AFDNP55196 1824 aaKnown RBP22.66■■□□□ 1.22
GABRB3-209ENST00000555632 OS9Q13438 667 aaPredicted RBP22.66■■□□□ 1.22
GABRB3-209ENST00000555632 DNAJC10Q8IXB1 793 aa22.66■■□□□ 1.22
GABRB3-209ENST00000555632 SYTL4Q96C24 671 aaPredicted RBP22.66■■□□□ 1.22
GABRB3-209ENST00000555632 ZBTB3Q9H5J0 574 aa22.66■■□□□ 1.22
GABRB3-209ENST00000555632 UBE3BQ7Z3V4 1068 aa22.65■■□□□ 1.22
GABRB3-209ENST00000555632 RBM42Q9BTD8 480 aaKnown RBP22.65■■□□□ 1.22
GABRB3-209ENST00000555632 NRAPQ86VF7 1730 aa22.65■■□□□ 1.22
GABRB3-209ENST00000555632 WNK3Q9BYP7 1800 aa22.64■■□□□ 1.21
GABRB3-209ENST00000555632 BCL9O00512 1426 aa22.64■■□□□ 1.21
GABRB3-209ENST00000555632 SLC4A9Q96Q91 983 aa22.64■■□□□ 1.21
GABRB3-209ENST00000555632 HDAC5Q9UQL6 1122 aa22.64■■□□□ 1.21
GABRB3-209ENST00000555632 A0A087WZG4 1122 aa22.63■■□□□ 1.21
GABRB3-209ENST00000555632 ZNF330Q9Y3S2 320 aaPredicted RBP22.63■■□□□ 1.21
GABRB3-209ENST00000555632 UBAP1LF5GYI3 381 aa22.63■■□□□ 1.21
GABRB3-209ENST00000555632 HSP90AB4PQ58FF6 505 aa22.63■■□□□ 1.21
GABRB3-209ENST00000555632 RTL5Q5HYW3 569 aaPredicted RBP22.63■■□□□ 1.21
GABRB3-209ENST00000555632 PI4K2BQ8TCG2 481 aa22.63■■□□□ 1.21
GABRB3-209ENST00000555632 RILPL2Q969X0 211 aa22.63■■□□□ 1.21
GABRB3-209ENST00000555632 TRIM6-TRIM34B2RNG4 842 aa22.62■■□□□ 1.21
GABRB3-209ENST00000555632 MAP4K4O95819 1239 aaPredicted RBP22.62■■□□□ 1.21
GABRB3-209ENST00000555632 SIL1Q9H173 461 aa22.62■■□□□ 1.21
GABRB3-209ENST00000555632 SASH1O94885 1247 aa22.61■■□□□ 1.21
GABRB3-209ENST00000555632 PRIM1P49642 420 aaKnown RBP22.61■■□□□ 1.21
GABRB3-209ENST00000555632 CASP7P55210 303 aa22.61■■□□□ 1.21
GABRB3-209ENST00000555632 USP26Q9BXU7 913 aa22.61■■□□□ 1.21
GABRB3-209ENST00000555632 SLKQ9H2G2 1235 aaPredicted RBP22.61■■□□□ 1.21
GABRB3-209ENST00000555632 NUP188Q5SRE5 1749 aa22.61■■□□□ 1.21
GABRB3-209ENST00000555632 SPRYD3Q8NCJ5 442 aa22.61■■□□□ 1.21
GABRB3-209ENST00000555632 DDB1Q16531 1140 aa22.59■■□□□ 1.21
GABRB3-209ENST00000555632 CASC1Q6TDU7 716 aa22.59■■□□□ 1.21
GABRB3-209ENST00000555632 VSIG10Q8N0Z9 540 aa22.59■■□□□ 1.21
GABRB3-209ENST00000555632 CCDC9Q9Y3X0 531 aaKnown RBP22.59■■□□□ 1.21
GABRB3-209ENST00000555632 SPATA31A5Q5VU36 1347 aa22.59■■□□□ 1.21
GABRB3-209ENST00000555632 SPATA31A7Q8IWB4 1347 aa22.59■■□□□ 1.21
GABRB3-209ENST00000555632 CD2BP2O95400 341 aaKnown RBP22.58■■□□□ 1.21
GABRB3-209ENST00000555632 AOX1Q06278 1338 aa22.58■■□□□ 1.21
GABRB3-209ENST00000555632 CLASRPQ8N2M8 674 aaKnown RBP22.58■■□□□ 1.2
GABRB3-209ENST00000555632 SLIT2O94813 1529 aa22.57■■□□□ 1.2
GABRB3-209ENST00000555632 MARCH10Q8NA82 808 aaPredicted RBP22.57■■□□□ 1.2
GABRB3-209ENST00000555632 THRAP3Q9Y2W1 955 aaKnown RBP22.57■■□□□ 1.2
GABRB3-209ENST00000555632 LRP6O75581 1613 aa22.57■■□□□ 1.2
GABRB3-209ENST00000555632 DOT1LQ8TEK3 1739 aa22.57■■□□□ 1.2
GABRB3-209ENST00000555632 CHMLP26374 656 aa22.57■■□□□ 1.2
GABRB3-209ENST00000555632 RFX5P48382 616 aaPredicted RBP22.57■■□□□ 1.2
GABRB3-209ENST00000555632 RABL6Q3YEC7 729 aaPredicted RBP22.57■■□□□ 1.2
GABRB3-209ENST00000555632 ACSBG1Q96GR2 724 aa22.57■■□□□ 1.2
GABRB3-209ENST00000555632 H7C1W4 665 aa22.56■■□□□ 1.2
GABRB3-209ENST00000555632 ERC2O15083 957 aa22.56■■□□□ 1.2
GABRB3-209ENST00000555632 G3BP1Q13283 466 aaKnown RBP eCLIP22.56■■□□□ 1.2
GABRB3-209ENST00000555632 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.56■■□□□ 1.2
GABRB3-209ENST00000555632 A0A0G2JS52 829 aa22.55■■□□□ 1.2
GABRB3-209ENST00000555632 ERC1Q8IUD2 1116 aa22.55■■□□□ 1.2
GABRB3-209ENST00000555632 EAF2Q96CJ1 260 aaPredicted RBP22.55■■□□□ 1.2
GABRB3-209ENST00000555632 IL25Q9H293 177 aa22.55■■□□□ 1.2
GABRB3-209ENST00000555632 CWC25Q9NXE8 425 aaPredicted RBP22.55■■□□□ 1.2
GABRB3-209ENST00000555632 STARD3NLO95772 234 aa22.55■■□□□ 1.2
GABRB3-209ENST00000555632 PTPN12Q05209 780 aaKnown RBP22.55■■□□□ 1.2
GABRB3-209ENST00000555632 AACSQ86V21 672 aa22.55■■□□□ 1.2
GABRB3-209ENST00000555632 CDCA7Q9BWT1 371 aaPredicted RBP22.55■■□□□ 1.2
GABRB3-209ENST00000555632 TEX13AQ9BXU3 409 aaPredicted RBP22.55■■□□□ 1.2
GABRB3-209ENST00000555632 ANTXR1Q9H6X2 564 aa22.55■■□□□ 1.2
GABRB3-209ENST00000555632 CYP19A1P11511 503 aaPredicted RBP22.54■■□□□ 1.2
GABRB3-209ENST00000555632 FOXO4P98177 505 aa22.54■■□□□ 1.2
GABRB3-209ENST00000555632 TJP1Q07157 1748 aa22.54■■□□□ 1.2
GABRB3-209ENST00000555632 ARXQ96QS3 562 aa22.54■■□□□ 1.2
GABRB3-209ENST00000555632 ESYT1Q9BSJ8 1104 aa22.54■■□□□ 1.2
GABRB3-209ENST00000555632 TLR7Q9NYK1 1049 aaKnown RBP22.54■■□□□ 1.2
GABRB3-209ENST00000555632 USP42Q9H9J4 1324 aaKnown RBP22.54■■□□□ 1.2
GABRB3-209ENST00000555632 LMBR1LQ6UX01 489 aa22.54■■□□□ 1.2
GABRB3-209ENST00000555632 COL15A1P39059 1388 aa22.53■■□□□ 1.2
GABRB3-209ENST00000555632 C8orf37Q96NL8 207 aa22.53■■□□□ 1.2
GABRB3-209ENST00000555632 CCDC8Q9H0W5 538 aaPredicted RBP22.53■■□□□ 1.2
GABRB3-209ENST00000555632 IFIT2P09913 472 aaKnown RBP22.52■■□□□ 1.2
GABRB3-209ENST00000555632 ZBTB1Q9Y2K1 713 aa22.52■■□□□ 1.2
GABRB3-209ENST00000555632 REC8O95072 547 aa22.52■■□□□ 1.2
GABRB3-209ENST00000555632 HSCBQ8IWL3 235 aa22.52■■□□□ 1.2
GABRB3-209ENST00000555632 CCDC191Q8NCU4 936 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms