RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 HIP1O00291 1037 aa19.48■□□□□ 0.71
TUBB3-209ENST00000555609 CSPP1Q1MSJ5 1256 aa19.48■□□□□ 0.71
TUBB3-209ENST00000555609 C14orf37Q86TY3 774 aa19.48■□□□□ 0.71
TUBB3-209ENST00000555609 CHD2O14647 1828 aaKnown RBP19.47■□□□□ 0.71
TUBB3-209ENST00000555609 ZNF530Q6P9A1 599 aaPredicted RBP19.47■□□□□ 0.71
TUBB3-209ENST00000555609 KSR2Q6VAB6 950 aa19.47■□□□□ 0.71
TUBB3-209ENST00000555609 ECHDC1Q9NTX5 307 aa19.47■□□□□ 0.71
TUBB3-209ENST00000555609 NSFL1CQ9UNZ2 370 aaKnown RBP19.47■□□□□ 0.71
TUBB3-209ENST00000555609 RNMTO43148 476 aaKnown RBP19.46■□□□□ 0.71
TUBB3-209ENST00000555609 ZSCAN22P10073 491 aaPredicted RBP19.46■□□□□ 0.71
TUBB3-209ENST00000555609 IL25Q9H293 177 aa19.46■□□□□ 0.71
TUBB3-209ENST00000555609 SH2B1Q9NRF2 756 aaPredicted RBP19.46■□□□□ 0.71
TUBB3-209ENST00000555609 DIAPH3Q9NSV4 1193 aa19.46■□□□□ 0.71
TUBB3-209ENST00000555609 PSME1Q06323 249 aa19.45■□□□□ 0.7
TUBB3-209ENST00000555609 OS9Q13438 667 aaPredicted RBP19.45■□□□□ 0.7
TUBB3-209ENST00000555609 C1orf141Q5JVX7 400 aa19.45■□□□□ 0.7
TUBB3-209ENST00000555609 VPS53Q5VIR6 699 aa19.45■□□□□ 0.7
TUBB3-209ENST00000555609 EVI5LQ96CN4 794 aa19.45■□□□□ 0.7
TUBB3-209ENST00000555609 HYPKQ9NX55 129 aa19.45■□□□□ 0.7
TUBB3-209ENST00000555609 ZKSCAN5Q9Y2L8 839 aa19.45■□□□□ 0.7
TUBB3-209ENST00000555609 RPAP1Q9BWH6 1393 aaPredicted RBP19.45■□□□□ 0.7
TUBB3-209ENST00000555609 FOXD4L5Q5VV16 416 aaPredicted RBP19.45■□□□□ 0.7
TUBB3-209ENST00000555609 USP48Q86UV5 1035 aa19.45■□□□□ 0.7
TUBB3-209ENST00000555609 FOXD4L4Q8WXT5 416 aaPredicted RBP19.45■□□□□ 0.7
TUBB3-209ENST00000555609 UTYO14607 1347 aa19.45■□□□□ 0.7
TUBB3-209ENST00000555609 C9orf78Q9NZ63 289 aaPredicted RBP19.44■□□□□ 0.7
TUBB3-209ENST00000555609 STRCP1A6NGW2 1772 aa19.44■□□□□ 0.7
TUBB3-209ENST00000555609 DDX58O95786 925 aaKnown RBP19.43■□□□□ 0.7
TUBB3-209ENST00000555609 AK2P54819 239 aa19.43■□□□□ 0.7
TUBB3-209ENST00000555609 CCDC183Q5T5S1 534 aa19.43■□□□□ 0.7
TUBB3-209ENST00000555609 NOL8Q76FK4 1167 aaKnown RBP19.43■□□□□ 0.7
TUBB3-209ENST00000555609 SMC3Q9UQE7 1217 aa19.43■□□□□ 0.7
TUBB3-209ENST00000555609 SLIT3O75094 1523 aa19.43■□□□□ 0.7
TUBB3-209ENST00000555609 STX6O43752 255 aa19.43■□□□□ 0.7
TUBB3-209ENST00000555609 GIGYF1O75420 1035 aaPredicted RBP19.43■□□□□ 0.7
TUBB3-209ENST00000555609 IFIT2P09913 472 aaKnown RBP19.43■□□□□ 0.7
TUBB3-209ENST00000555609 UBE2HP62256 183 aa19.43■□□□□ 0.7
TUBB3-209ENST00000555609 SNRKQ9NRH2 765 aa19.43■□□□□ 0.7
TUBB3-209ENST00000555609 MAP4K4O95819 1239 aaPredicted RBP19.42■□□□□ 0.7
TUBB3-209ENST00000555609 CWC27Q6UX04 472 aaKnown RBP19.42■□□□□ 0.7
TUBB3-209ENST00000555609 RUFY3Q7L099 469 aa19.42■□□□□ 0.7
TUBB3-209ENST00000555609 LINS1Q8NG48 757 aa19.42■□□□□ 0.7
TUBB3-209ENST00000555609 ZSWIM6Q9HCJ5 1215 aa19.42■□□□□ 0.7
TUBB3-209ENST00000555609 KCNQ3O43525 872 aa19.41■□□□□ 0.7
TUBB3-209ENST00000555609 ARHGEF25Q86VW2 580 aa19.41■□□□□ 0.7
TUBB3-209ENST00000555609 RASEFQ8IZ41 740 aa19.41■□□□□ 0.7
TUBB3-209ENST00000555609 MAP3K2Q9Y2U5 619 aa19.41■□□□□ 0.7
TUBB3-209ENST00000555609 CYP46A1Q9Y6A2 500 aa19.41■□□□□ 0.7
TUBB3-209ENST00000555609 CAMTA1Q9Y6Y1 1673 aa19.41■□□□□ 0.7
TUBB3-209ENST00000555609 F13A1P00488 732 aa19.4■□□□□ 0.7
TUBB3-209ENST00000555609 CHAMP1Q96JM3 812 aa19.4■□□□□ 0.7
TUBB3-209ENST00000555609 PDRG1Q9NUG6 133 aa19.4■□□□□ 0.7
TUBB3-209ENST00000555609 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.4■□□□□ 0.7
TUBB3-209ENST00000555609 ZKSCAN1P17029 563 aaPredicted RBP19.39■□□□□ 0.7
TUBB3-209ENST00000555609 SYT1P21579 422 aa19.39■□□□□ 0.7
TUBB3-209ENST00000555609 MPRIPQ6WCQ1 1025 aa19.39■□□□□ 0.7
TUBB3-209ENST00000555609 RBM33Q96EV2 1170 aaKnown RBP19.39■□□□□ 0.7
TUBB3-209ENST00000555609 ALDH8A1Q9H2A2 487 aaPredicted RBP19.39■□□□□ 0.7
TUBB3-209ENST00000555609 LTBP4Q8N2S1 1624 aa19.39■□□□□ 0.69
TUBB3-209ENST00000555609 CASTP20810 708 aaKnown RBP19.39■□□□□ 0.69
TUBB3-209ENST00000555609 PSMA5P28066 241 aa19.39■□□□□ 0.69
TUBB3-209ENST00000555609 HSP90AA2PQ14568 343 aaPredicted RBP19.39■□□□□ 0.69
TUBB3-209ENST00000555609 NECTIN1Q15223 517 aa19.39■□□□□ 0.69
TUBB3-209ENST00000555609 DDX21Q9NR30 783 aaKnown RBP eCLIP19.39■□□□□ 0.69
TUBB3-209ENST00000555609 GRM8O00222 908 aa19.38■□□□□ 0.69
TUBB3-209ENST00000555609 GADD45BO75293 160 aaPredicted RBP19.38■□□□□ 0.69
TUBB3-209ENST00000555609 GLIPR1L2Q4G1C9 344 aa19.38■□□□□ 0.69
TUBB3-209ENST00000555609 ESCO1Q5FWF5 840 aa19.38■□□□□ 0.69
TUBB3-209ENST00000555609 ADAMTS7Q9UKP4 1686 aa19.38■□□□□ 0.69
TUBB3-209ENST00000555609 GCP02774 474 aa19.37■□□□□ 0.69
TUBB3-209ENST00000555609 G3BP1Q13283 466 aaKnown RBP eCLIP19.37■□□□□ 0.694e-6■■□□□ 14.2
TUBB3-209ENST00000555609 SPG7Q9UQ90 795 aa19.37■□□□□ 0.69
TUBB3-209ENST00000555609 PLEKHG2Q9H7P9 1386 aa19.37■□□□□ 0.69
TUBB3-209ENST00000555609 CCDC171Q6TFL3 1326 aa19.37■□□□□ 0.69
TUBB3-209ENST00000555609 ANKRD1Q15327 319 aa19.37■□□□□ 0.69
TUBB3-209ENST00000555609 MST1RQ04912 1400 aa19.35■□□□□ 0.69
TUBB3-209ENST00000555609 RNF20Q5VTR2 975 aa19.35■□□□□ 0.69
TUBB3-209ENST00000555609 LARP1Q6PKG0 1096 aaKnown RBP19.35■□□□□ 0.69
TUBB3-209ENST00000555609 AACSQ86V21 672 aa19.35■□□□□ 0.69
TUBB3-209ENST00000555609 ANKRD24Q8TF21 1146 aa19.35■□□□□ 0.69
TUBB3-209ENST00000555609 MAP4K1Q92918 833 aa19.35■□□□□ 0.69
TUBB3-209ENST00000555609 LRRC59Q96AG4 307 aaKnown RBP19.35■□□□□ 0.69
TUBB3-209ENST00000555609 JAKMIP1Q96N16 626 aaKnown RBP19.35■□□□□ 0.69
TUBB3-209ENST00000555609 SIPA1L3O60292 1781 aaPredicted RBP19.35■□□□□ 0.69
TUBB3-209ENST00000555609 PTH1RQ03431 593 aa19.35■□□□□ 0.69
TUBB3-209ENST00000555609 PRPF40BQ6NWY9 871 aaKnown RBP19.35■□□□□ 0.69
TUBB3-209ENST00000555609 CNPY2Q9Y2B0 182 aa19.35■□□□□ 0.69
TUBB3-209ENST00000555609 ANXA1P04083 346 aa19.34■□□□□ 0.69
TUBB3-209ENST00000555609 PDCP20941 246 aa19.34■□□□□ 0.69
TUBB3-209ENST00000555609 RGPD2P0DJD1 1756 aa19.34■□□□□ 0.69
TUBB3-209ENST00000555609 PXDNQ92626 1479 aa19.33■□□□□ 0.69
TUBB3-209ENST00000555609 GJB2P29033 226 aa19.33■□□□□ 0.69
TUBB3-209ENST00000555609 RNF214Q8ND24 703 aa19.33■□□□□ 0.69
TUBB3-209ENST00000555609 GDPD2Q9HCC8 539 aa19.33■□□□□ 0.69
TUBB3-209ENST00000555609 HMG20BQ9P0W2 317 aa19.33■□□□□ 0.69
TUBB3-209ENST00000555609 MTMR6Q9Y217 621 aa19.33■□□□□ 0.69
TUBB3-209ENST00000555609 MRC1P22897 1456 aa19.33■□□□□ 0.68
TUBB3-209ENST00000555609 TSGA10IPQ3SY00 556 aa19.33■□□□□ 0.68
TUBB3-209ENST00000555609 CREB3L3Q68CJ9 461 aa19.33■□□□□ 0.68
TUBB3-209ENST00000555609 SUCLG2Q96I99 432 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms