RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 NBPF26B4DH59 902 aa12.18□□□□□ -0.46
HNRNPC-220ENST00000555585 ZBTB7BO15156 539 aaPredicted RBP12.18□□□□□ -0.46
HNRNPC-220ENST00000555585 SIK1P57059 783 aa12.18□□□□□ -0.46
HNRNPC-220ENST00000555585 NBPF14Q5TI25 921 aa12.18□□□□□ -0.46
HNRNPC-220ENST00000555585 NBPF10Q6P3W6 841 aaKnown RBP12.18□□□□□ -0.46
HNRNPC-220ENST00000555585 FAM196AQ6ZSG2 479 aa12.18□□□□□ -0.46
HNRNPC-220ENST00000555585 PTF1AQ7RTS3 328 aa12.18□□□□□ -0.46
HNRNPC-220ENST00000555585 NBPF15Q8N660 670 aa12.18□□□□□ -0.46
HNRNPC-220ENST00000555585 MAP3K2Q9Y2U5 619 aa12.18□□□□□ -0.46
HNRNPC-220ENST00000555585 ZNF330Q9Y3S2 320 aaPredicted RBP12.18□□□□□ -0.46
HNRNPC-220ENST00000555585 ADCY9O60503 1353 aa12.18□□□□□ -0.46
HNRNPC-220ENST00000555585 CYP19A1P11511 503 aaPredicted RBP12.17□□□□□ -0.46
HNRNPC-220ENST00000555585 SRCIN1Q9C0H9 1055 aa12.17□□□□□ -0.46
HNRNPC-220ENST00000555585 ZBTB40Q9NUA8 1239 aa12.17□□□□□ -0.46
HNRNPC-220ENST00000555585 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
HNRNPC-220ENST00000555585 POTEAQ6S8J7 498 aa12.16□□□□□ -0.46
HNRNPC-220ENST00000555585 ANKRD13DQ6ZTN6 518 aa12.16□□□□□ -0.46
HNRNPC-220ENST00000555585 LRP10Q7Z4F1 713 aa12.16□□□□□ -0.46
HNRNPC-220ENST00000555585 PCDHB15Q9Y5E8 787 aa12.16□□□□□ -0.46
HNRNPC-220ENST00000555585 ARFGEF2Q9Y6D5 1785 aa12.15□□□□□ -0.46
HNRNPC-220ENST00000555585 NEXNQ0ZGT2 675 aa12.15□□□□□ -0.46
HNRNPC-220ENST00000555585 ITPK1Q13572 414 aa12.15□□□□□ -0.46
HNRNPC-220ENST00000555585 TTLL7Q6ZT98 887 aa12.15□□□□□ -0.46
HNRNPC-220ENST00000555585 NPM2Q86SE8 214 aaKnown RBP12.15□□□□□ -0.46
HNRNPC-220ENST00000555585 ARXQ96QS3 562 aa12.15□□□□□ -0.46
HNRNPC-220ENST00000555585 BCL11BQ9C0K0 894 aaPredicted RBP12.15□□□□□ -0.46
HNRNPC-220ENST00000555585 C1orf115Q9H7X2 142 aa12.15□□□□□ -0.46
HNRNPC-220ENST00000555585 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.47
HNRNPC-220ENST00000555585 ATP10DQ9P241 1426 aa12.14□□□□□ -0.47
HNRNPC-220ENST00000555585 ZNF831Q5JPB2 1677 aa12.14□□□□□ -0.47
HNRNPC-220ENST00000555585 TRIM37O94972 964 aa12.14□□□□□ -0.47
HNRNPC-220ENST00000555585 BEND3Q5T5X7 828 aa12.14□□□□□ -0.47
HNRNPC-220ENST00000555585 KIF6Q6ZMV9 814 aa12.14□□□□□ -0.47
HNRNPC-220ENST00000555585 CENPQQ7L2Z9 268 aaPredicted RBP12.14□□□□□ -0.47
HNRNPC-220ENST00000555585 PLBD2Q8NHP8 589 aa12.14□□□□□ -0.47
HNRNPC-220ENST00000555585 MEIS3Q99687 375 aa12.14□□□□□ -0.47
HNRNPC-220ENST00000555585 MYD88Q99836 296 aa12.14□□□□□ -0.47
HNRNPC-220ENST00000555585 RWDD1Q9H446 243 aaPredicted RBP12.14□□□□□ -0.47
HNRNPC-220ENST00000555585 CCDC87Q9NVE4 849 aa12.14□□□□□ -0.47
HNRNPC-220ENST00000555585 ZBTB1Q9Y2K1 713 aa12.14□□□□□ -0.47
HNRNPC-220ENST00000555585 AFDNP55196 1824 aaKnown RBP12.14□□□□□ -0.47
HNRNPC-220ENST00000555585 ALDH1L1O75891 902 aa12.13□□□□□ -0.47
HNRNPC-220ENST00000555585 GNAI3P08754 354 aa12.13□□□□□ -0.47
HNRNPC-220ENST00000555585 CRKLP46109 303 aaKnown RBP12.13□□□□□ -0.47
HNRNPC-220ENST00000555585 LINS1Q8NG48 757 aa12.13□□□□□ -0.47
HNRNPC-220ENST00000555585 METTL22Q9BUU2 404 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-220ENST00000555585 CCNL1Q9UK58 526 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-220ENST00000555585 LY75O60449 1722 aa12.13□□□□□ -0.47
HNRNPC-220ENST00000555585 COL5A3P25940 1745 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-220ENST00000555585 NUP188Q5SRE5 1749 aa12.12□□□□□ -0.47
HNRNPC-220ENST00000555585 IGHDP01880 384 aa12.12□□□□□ -0.47
HNRNPC-220ENST00000555585 GNAI2P04899 355 aa12.12□□□□□ -0.47
HNRNPC-220ENST00000555585 IL6STP40189 918 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-220ENST00000555585 KCNQ4P56696 695 aa12.12□□□□□ -0.47
HNRNPC-220ENST00000555585 CWF19L2Q2TBE0 894 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-220ENST00000555585 INTS5Q6P9B9 1019 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-220ENST00000555585 PELP1Q8IZL8 1130 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-220ENST00000555585 ZBTB3Q9H5J0 574 aa12.12□□□□□ -0.47
HNRNPC-220ENST00000555585 RREB1Q92766 1687 aa12.12□□□□□ -0.47
HNRNPC-220ENST00000555585 HAX1O00165 279 aa12.11□□□□□ -0.47
HNRNPC-220ENST00000555585 UBTFL1P0CB47 393 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-220ENST00000555585 LINC00116Q8NCU8 138 aa12.11□□□□□ -0.47
HNRNPC-220ENST00000555585 USP44Q9H0E7 712 aa12.11□□□□□ -0.47
HNRNPC-220ENST00000555585 C9orf78Q9NZ63 289 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-220ENST00000555585 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
HNRNPC-220ENST00000555585 ATP5J2-PTCD1G3V325 749 aa12.1□□□□□ -0.47
HNRNPC-220ENST00000555585 IGKV5-2P06315 115 aa12.1□□□□□ -0.47
HNRNPC-220ENST00000555585 DZIP3Q86Y13 1208 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-220ENST00000555585 SP7Q8TDD2 431 aaPredicted RBP12.1□□□□□ -0.47
HNRNPC-220ENST00000555585 MYH14Q7Z406 1995 aaKnown RBP12.1□□□□□ -0.47
HNRNPC-220ENST00000555585 MAP3K15Q6ZN16 1313 aa12.1□□□□□ -0.47
HNRNPC-220ENST00000555585 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
HNRNPC-220ENST00000555585 NEURL1BA8MQ27 555 aa12.09□□□□□ -0.47
HNRNPC-220ENST00000555585 EIF5P55010 431 aaKnown RBP12.09□□□□□ -0.47
HNRNPC-220ENST00000555585 HDAC1Q13547 482 aaPredicted RBP12.09□□□□□ -0.47
HNRNPC-220ENST00000555585 RPAP2Q8IXW5 612 aaPredicted RBP12.09□□□□□ -0.47
HNRNPC-220ENST00000555585 ANKRD44Q8N8A2 993 aa12.09□□□□□ -0.47
HNRNPC-220ENST00000555585 TBC1D2BQ9UPU7 963 aa12.09□□□□□ -0.47
HNRNPC-220ENST00000555585 CNTNAP4Q9C0A0 1308 aa12.09□□□□□ -0.47
HNRNPC-220ENST00000555585 GRM8O00222 908 aa12.08□□□□□ -0.48
HNRNPC-220ENST00000555585 CEP85Q6P2H3 762 aa12.08□□□□□ -0.48
HNRNPC-220ENST00000555585 ILDR1Q86SU0 546 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-220ENST00000555585 HDAC5Q9UQL6 1122 aa12.08□□□□□ -0.48
HNRNPC-220ENST00000555585 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-220ENST00000555585 A0A087WZG4 1122 aa12.07□□□□□ -0.48
HNRNPC-220ENST00000555585 APBA3O96018 575 aa12.07□□□□□ -0.48
HNRNPC-220ENST00000555585 NBPF7P0C2Y1 421 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-220ENST00000555585 TCIRG1Q13488 830 aa12.07□□□□□ -0.48
HNRNPC-220ENST00000555585 GCKRQ14397 625 aa12.07□□□□□ -0.48
HNRNPC-220ENST00000555585 HSP90AB3PQ58FF7 597 aa12.07□□□□□ -0.48
HNRNPC-220ENST00000555585 RC3H1Q5TC82 1133 aaKnown RBP12.07□□□□□ -0.48
HNRNPC-220ENST00000555585 GIGYF2Q6Y7W6 1299 aaKnown RBP12.07□□□□□ -0.48
HNRNPC-220ENST00000555585 CWC25Q9NXE8 425 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-220ENST00000555585 ANKRD36CQ5JPF3 1778 aa12.07□□□□□ -0.48
HNRNPC-220ENST00000555585 NUP98P52948 1817 aa12.07□□□□□ -0.48
HNRNPC-220ENST00000555585 COL15A1P39059 1388 aa12.06□□□□□ -0.48
HNRNPC-220ENST00000555585 C4BP0C0L5 1744 aa12.06□□□□□ -0.48
HNRNPC-220ENST00000555585 ERVV-1B6SEH8 477 aa12.06□□□□□ -0.48
HNRNPC-220ENST00000555585 GNPATO15228 680 aa12.06□□□□□ -0.48
HNRNPC-220ENST00000555585 HMMRO75330 724 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms