RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 STYK1Q6J9G0 422 aa14.58□□□□□ -0.08
TDP1-212ENST00000555565 PRPF40BQ6NWY9 871 aaKnown RBP14.58□□□□□ -0.08
TDP1-212ENST00000555565 CNKSR1Q969H4 720 aa14.58□□□□□ -0.08
TDP1-212ENST00000555565 TBC1D2BQ9UPU7 963 aa14.58□□□□□ -0.08
TDP1-212ENST00000555565 ADAMTSL1Q8N6G6 1762 aa14.57□□□□□ -0.08
TDP1-212ENST00000555565 A0A087WZG4 1122 aa14.57□□□□□ -0.08
TDP1-212ENST00000555565 UBR2Q8IWV8 1755 aa14.57□□□□□ -0.08
TDP1-212ENST00000555565 SCN4AP35499 1836 aa14.57□□□□□ -0.08
TDP1-212ENST00000555565 STARD3NLO95772 234 aa14.56□□□□□ -0.08
TDP1-212ENST00000555565 DEFB115Q30KQ5 88 aa14.56□□□□□ -0.08
TDP1-212ENST00000555565 ZNF541Q9H0D2 1346 aa14.56□□□□□ -0.08
TDP1-212ENST00000555565 CAMTA2O94983 1202 aa14.55□□□□□ -0.08
TDP1-212ENST00000555565 CNTROBQ8N137 903 aa14.55□□□□□ -0.08
TDP1-212ENST00000555565 MASTLQ96GX5 879 aa14.55□□□□□ -0.08
TDP1-212ENST00000555565 ZNF496Q96IT1 587 aaPredicted RBP14.55□□□□□ -0.08
TDP1-212ENST00000555565 U2SURPO15042 1029 aaKnown RBP14.54□□□□□ -0.08
TDP1-212ENST00000555565 IL6STP40189 918 aaPredicted RBP14.54□□□□□ -0.08
TDP1-212ENST00000555565 EAPPQ56P03 285 aaPredicted RBP14.54□□□□□ -0.08
TDP1-212ENST00000555565 SOGA3Q5TF21 947 aa14.54□□□□□ -0.08
TDP1-212ENST00000555565 WDR33Q9C0J8 1336 aaKnown RBP14.54□□□□□ -0.08
TDP1-212ENST00000555565 SCN7AQ01118 1682 aa14.53□□□□□ -0.08
TDP1-212ENST00000555565 KLRG2A4D1S0 409 aaPredicted RBP14.53□□□□□ -0.08
TDP1-212ENST00000555565 A1BGP04217 495 aa14.53□□□□□ -0.08
TDP1-212ENST00000555565 EPHX2P34913 555 aa14.53□□□□□ -0.08
TDP1-212ENST00000555565 MAP1SQ66K74 1059 aaPredicted RBP14.53□□□□□ -0.08
TDP1-212ENST00000555565 OLFM4Q6UX06 510 aa14.53□□□□□ -0.08
TDP1-212ENST00000555565 CNBD1Q8NA66 436 aa14.53□□□□□ -0.08
TDP1-212ENST00000555565 SETDB2Q96T68 719 aa14.53□□□□□ -0.08
TDP1-212ENST00000555565 PCDH10Q9P2E7 1040 aa14.53□□□□□ -0.08
TDP1-212ENST00000555565 HACL1Q9UJ83 578 aa14.53□□□□□ -0.08
TDP1-212ENST00000555565 HEG1Q9ULI3 1381 aa14.52□□□□□ -0.08
TDP1-212ENST00000555565 FZD9O00144 591 aa14.52□□□□□ -0.09
TDP1-212ENST00000555565 MAP2K1Q02750 393 aaPredicted RBP14.52□□□□□ -0.09
TDP1-212ENST00000555565 FKBP4Q02790 459 aaKnown RBP eCLIP14.52□□□□□ -0.09
TDP1-212ENST00000555565 IL17REQ8NFR9 667 aa14.52□□□□□ -0.09
TDP1-212ENST00000555565 ZNF277Q9NRM2 450 aaPredicted RBP14.52□□□□□ -0.09
TDP1-212ENST00000555565 ARFGEF2Q9Y6D5 1785 aa14.52□□□□□ -0.09
TDP1-212ENST00000555565 MLLT1Q03111 559 aaPredicted RBP14.51□□□□□ -0.09
TDP1-212ENST00000555565 CCDC93Q567U6 631 aa14.51□□□□□ -0.09
TDP1-212ENST00000555565 ZNF790Q6PG37 636 aa14.51□□□□□ -0.09
TDP1-212ENST00000555565 TEX13AQ9BXU3 409 aaPredicted RBP14.51□□□□□ -0.09
TDP1-212ENST00000555565 CLEC11AQ9Y240 323 aa14.51□□□□□ -0.09
TDP1-212ENST00000555565 RNF123Q5XPI4 1314 aa14.5□□□□□ -0.09
TDP1-212ENST00000555565 ST5P78524 1137 aa14.5□□□□□ -0.09
TDP1-212ENST00000555565 FMR1Q06787 632 aaKnown RBP eCLIP14.5□□□□□ -0.09
TDP1-212ENST00000555565 PNMA8AQ86V59 439 aaPredicted RBP14.5□□□□□ -0.09
TDP1-212ENST00000555565 TTC5Q8N0Z6 440 aa14.5□□□□□ -0.09
TDP1-212ENST00000555565 SNED1Q8TER0 1413 aa14.49□□□□□ -0.09
TDP1-212ENST00000555565 CACNA1SQ13698 1873 aa14.49□□□□□ -0.09
TDP1-212ENST00000555565 CCDC85CA6NKD9 419 aa14.49□□□□□ -0.09
TDP1-212ENST00000555565 GNAT3A8MTJ3 354 aa14.49□□□□□ -0.09
TDP1-212ENST00000555565 GAS2L2Q8NHY3 880 aa14.49□□□□□ -0.09
TDP1-212ENST00000555565 PHACTR3Q96KR7 559 aa14.49□□□□□ -0.09
TDP1-212ENST00000555565 CFAP53Q96M91 514 aa14.49□□□□□ -0.09
TDP1-212ENST00000555565 DDX21Q9NR30 783 aaKnown RBP eCLIP14.49□□□□□ -0.09
TDP1-212ENST00000555565 ZNF330Q9Y3S2 320 aaPredicted RBP14.49□□□□□ -0.09
TDP1-212ENST00000555565 THSD7BQ9C0I4 1608 aa14.48□□□□□ -0.09
TDP1-212ENST00000555565 NPR1P16066 1061 aa14.48□□□□□ -0.09
TDP1-212ENST00000555565 PPP2R1AP30153 589 aa14.48□□□□□ -0.09
TDP1-212ENST00000555565 PRKAR2BP31323 418 aa14.48□□□□□ -0.09
TDP1-212ENST00000555565 CST9Q5W186 159 aa14.48□□□□□ -0.09
TDP1-212ENST00000555565 GPC2Q8N158 579 aa14.48□□□□□ -0.09
TDP1-212ENST00000555565 RSPH6AQ9H0K4 717 aa14.48□□□□□ -0.09
TDP1-212ENST00000555565 SIPA1L3O60292 1781 aaPredicted RBP14.47□□□□□ -0.09
TDP1-212ENST00000555565 KCNQ3O43525 872 aa14.47□□□□□ -0.09
TDP1-212ENST00000555565 IARSP41252 1262 aaKnown RBP14.47□□□□□ -0.09
TDP1-212ENST00000555565 TEFQ10587 303 aa14.47□□□□□ -0.09
TDP1-212ENST00000555565 DZIP3Q86Y13 1208 aaKnown RBP14.47□□□□□ -0.09
TDP1-212ENST00000555565 RTKN2Q8IZC4 609 aa14.47□□□□□ -0.09
TDP1-212ENST00000555565 SYNE4Q8N205 404 aa14.47□□□□□ -0.09
TDP1-212ENST00000555565 CAPNS2Q96L46 248 aa14.47□□□□□ -0.09
TDP1-212ENST00000555565 ABT1Q9ULW3 272 aaKnown RBP14.47□□□□□ -0.09
TDP1-212ENST00000555565 LTBP1Q14766 1721 aa14.46□□□□□ -0.09
TDP1-212ENST00000555565 COL4A5P29400 1685 aa14.46□□□□□ -0.09
TDP1-212ENST00000555565 CLEC4GQ6UXB4 293 aa14.46□□□□□ -0.09
TDP1-212ENST00000555565 GPR101Q96P66 508 aaPredicted RBP14.46□□□□□ -0.09
TDP1-212ENST00000555565 NUDCQ9Y266 331 aa14.46□□□□□ -0.09
TDP1-212ENST00000555565 USP16Q9Y5T5 823 aa14.46□□□□□ -0.09
TDP1-212ENST00000555565 CEMIPQ8WUJ3 1361 aa14.46□□□□□ -0.1
TDP1-212ENST00000555565 PIP4K2AP48426 406 aaPredicted RBP14.45□□□□□ -0.1
TDP1-212ENST00000555565 CYP4F22Q6NT55 531 aa14.45□□□□□ -0.1
TDP1-212ENST00000555565 NBPF5PQ86XG9 351 aaPredicted RBP14.45□□□□□ -0.1
TDP1-212ENST00000555565 FMNL2Q96PY5 1086 aa14.45□□□□□ -0.1
TDP1-212ENST00000555565 BCORQ6W2J9 1755 aa14.45□□□□□ -0.1
TDP1-212ENST00000555565 PRAMEF22A3QJZ6 481 aa14.44□□□□□ -0.1
TDP1-212ENST00000555565 NPHP1O15259 732 aa14.44□□□□□ -0.1
TDP1-212ENST00000555565 U2AF1L5P0DN76 240 aaPredicted RBP14.44□□□□□ -0.1
TDP1-212ENST00000555565 SCNN1DP51172 638 aa14.44□□□□□ -0.1
TDP1-212ENST00000555565 U2AF1Q01081 240 aaKnown RBP eCLIP14.44□□□□□ -0.1
TDP1-212ENST00000555565 TSKSQ9UJT2 592 aa14.44□□□□□ -0.1
TDP1-212ENST00000555565 TRAF5O00463 557 aa14.43□□□□□ -0.1
TDP1-212ENST00000555565 EPS15P42566 896 aa14.43□□□□□ -0.1
TDP1-212ENST00000555565 TPTE2Q6XPS3 522 aa14.43□□□□□ -0.1
TDP1-212ENST00000555565 PSMD1Q99460 953 aa14.43□□□□□ -0.1
TDP1-212ENST00000555565 TLL2Q9Y6L7 1015 aa14.43□□□□□ -0.1
TDP1-212ENST00000555565 TNRC18O15417 2968 aaPredicted RBP14.42□□□□□ -0.1
TDP1-212ENST00000555565 AOC2O75106 756 aa14.42□□□□□ -0.1
TDP1-212ENST00000555565 MAP2K2P36507 400 aa14.42□□□□□ -0.1
TDP1-212ENST00000555565 ECE1P42892 770 aa14.42□□□□□ -0.1
TDP1-212ENST00000555565 NBPF26B4DH59 902 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms