RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 STARD13Q9Y3M8 1113 aa10.89□□□□□ -0.67
VRK1-205ENST00000555402 BACH1O14867 736 aa10.88□□□□□ -0.67
VRK1-205ENST00000555402 LRRC69Q6ZNQ3 347 aa10.88□□□□□ -0.67
VRK1-205ENST00000555402 ZDHHC1Q8WTX9 485 aa10.88□□□□□ -0.67
VRK1-205ENST00000555402 TIMELESSQ9UNS1 1208 aa10.88□□□□□ -0.67
VRK1-205ENST00000555402 PRSS36Q5K4E3 855 aa10.87□□□□□ -0.67
VRK1-205ENST00000555402 C8orf86Q6ZUL3 223 aa10.87□□□□□ -0.67
VRK1-205ENST00000555402 KRTAP1-3Q8IUG1 177 aa10.87□□□□□ -0.67
VRK1-205ENST00000555402 MICALL1Q8N3F8 863 aa10.87□□□□□ -0.67
VRK1-205ENST00000555402 TNFRSF25Q93038 417 aa10.87□□□□□ -0.67
VRK1-205ENST00000555402 L3MBTL2Q969R5 705 aa10.87□□□□□ -0.67
VRK1-205ENST00000555402 NACC1Q96RE7 527 aa10.87□□□□□ -0.67
VRK1-205ENST00000555402 SCHIP1Q9P0W5 487 aaPredicted RBP10.87□□□□□ -0.67
VRK1-205ENST00000555402 SEMA3FQ13275 785 aa10.86□□□□□ -0.67
VRK1-205ENST00000555402 GRIK4Q16099 956 aa10.86□□□□□ -0.67
VRK1-205ENST00000555402 SLC30A3Q99726 388 aa10.86□□□□□ -0.67
VRK1-205ENST00000555402 EML1O00423 815 aa10.85□□□□□ -0.67
VRK1-205ENST00000555402 NOS2P35228 1153 aa10.85□□□□□ -0.67
VRK1-205ENST00000555402 SFSWAPQ12872 951 aaKnown RBP10.85□□□□□ -0.67
VRK1-205ENST00000555402 TEAD4Q15561 434 aa10.85□□□□□ -0.67
VRK1-205ENST00000555402 ERICH6Q7L0X2 663 aa10.85□□□□□ -0.67
VRK1-205ENST00000555402 GDPD2Q9HCC8 539 aa10.85□□□□□ -0.67
VRK1-205ENST00000555402 NEUROD4Q9HD90 331 aa10.85□□□□□ -0.67
VRK1-205ENST00000555402 ALBP02768 609 aa10.84□□□□□ -0.67
VRK1-205ENST00000555402 WASHC4Q2M389 1173 aa10.84□□□□□ -0.67
VRK1-205ENST00000555402 C7orf43Q8WVR3 580 aa10.84□□□□□ -0.67
VRK1-205ENST00000555402 NID1P14543 1247 aa10.83□□□□□ -0.68
VRK1-205ENST00000555402 ABL2P42684 1182 aa10.83□□□□□ -0.68
VRK1-205ENST00000555402 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.83□□□□□ -0.68
VRK1-205ENST00000555402 ZNF358Q9NW07 568 aa10.82□□□□□ -0.68
VRK1-205ENST00000555402 GPC6Q9Y625 555 aaPredicted RBP10.82□□□□□ -0.68
VRK1-205ENST00000555402 SOX11P35716 441 aa10.81□□□□□ -0.68
VRK1-205ENST00000555402 EML3Q32P44 896 aa10.81□□□□□ -0.68
VRK1-205ENST00000555402 NBPF11Q86T75 865 aa10.81□□□□□ -0.68
VRK1-205ENST00000555402 PIK3CDO00329 1044 aa10.8□□□□□ -0.68
VRK1-205ENST00000555402 ADH7P40394 386 aa10.8□□□□□ -0.68
VRK1-205ENST00000555402 SPEM2Q0P670 501 aa10.8□□□□□ -0.68
VRK1-205ENST00000555402 C20orf204Q6ZNR8 217 aa10.8□□□□□ -0.68
VRK1-205ENST00000555402 NOD1Q9Y239 953 aa10.8□□□□□ -0.68
VRK1-205ENST00000555402 C9orf172C9J069 976 aa10.79□□□□□ -0.68
VRK1-205ENST00000555402 NEUROD1Q13562 356 aa10.79□□□□□ -0.68
VRK1-205ENST00000555402 KRTAP4-12Q9BQ66 201 aa10.79□□□□□ -0.68
VRK1-205ENST00000555402 ZNF232Q9UNY5 417 aa10.79□□□□□ -0.68
VRK1-205ENST00000555402 H2AFB1P0C5Y9 115 aa10.78□□□□□ -0.68
VRK1-205ENST00000555402 H2AFB2P0C5Z0 115 aa10.78□□□□□ -0.68
VRK1-205ENST00000555402 EPHA4P54764 986 aa10.78□□□□□ -0.68
VRK1-205ENST00000555402 GTF2IP78347 998 aa10.78□□□□□ -0.68
VRK1-205ENST00000555402 TBCELQ5QJ74 424 aa10.78□□□□□ -0.68
VRK1-205ENST00000555402 TRAPPC3LQ5T215 181 aa10.78□□□□□ -0.68
VRK1-205ENST00000555402 RAB44Q7Z6P3 723 aaPredicted RBP10.78□□□□□ -0.68
VRK1-205ENST00000555402 PSME1Q06323 249 aa10.77□□□□□ -0.69
VRK1-205ENST00000555402 ADGRE1Q14246 886 aa10.77□□□□□ -0.69
VRK1-205ENST00000555402 C14orf37Q86TY3 774 aa10.77□□□□□ -0.69
VRK1-205ENST00000555402 SLC9A9Q8IVB4 645 aa10.77□□□□□ -0.69
VRK1-205ENST00000555402 SERTM1A2A2V5 107 aa10.76□□□□□ -0.69
VRK1-205ENST00000555402 LZTS3O60299 673 aaPredicted RBP10.76□□□□□ -0.69
VRK1-205ENST00000555402 SKIP12755 728 aa10.76□□□□□ -0.69
VRK1-205ENST00000555402 LCE3BQ5TA77 95 aa10.76□□□□□ -0.69
VRK1-205ENST00000555402 SH3PXD2AQ5TCZ1 1133 aa10.76□□□□□ -0.69
VRK1-205ENST00000555402 TNS4Q8IZW8 715 aa10.76□□□□□ -0.69
VRK1-205ENST00000555402 RHPN1Q8TCX5 695 aa10.76□□□□□ -0.69
VRK1-205ENST00000555402 SELPP16109 830 aa10.75□□□□□ -0.69
VRK1-205ENST00000555402 MBTPS1Q14703 1052 aa10.75□□□□□ -0.69
VRK1-205ENST00000555402 LILRB5O75023 590 aa10.74□□□□□ -0.69
VRK1-205ENST00000555402 CEP63Q96MT8 703 aa10.74□□□□□ -0.69
VRK1-205ENST00000555402 BRD7Q9NPI1 651 aa10.74□□□□□ -0.69
VRK1-205ENST00000555402 ELNP15502 786 aa10.73□□□□□ -0.69
VRK1-205ENST00000555402 KCNQ4P56696 695 aa10.73□□□□□ -0.69
VRK1-205ENST00000555402 LRP8Q14114 963 aa10.73□□□□□ -0.69
VRK1-205ENST00000555402 A0A0A0MRY4 1105 aa10.72□□□□□ -0.69
VRK1-205ENST00000555402 NCOA4Q13772 614 aa10.72□□□□□ -0.69
VRK1-205ENST00000555402 C1orf53Q5VUE5 145 aa10.72□□□□□ -0.69
VRK1-205ENST00000555402 TXNRD3Q86VQ6 643 aa10.72□□□□□ -0.69
VRK1-205ENST00000555402 ANKIB1Q9P2G1 1089 aa10.72□□□□□ -0.69
VRK1-205ENST00000555402 KCNH4Q9UQ05 1017 aa10.72□□□□□ -0.69
VRK1-205ENST00000555402 SFI1A8K8P3 1242 aa10.71□□□□□ -0.69
VRK1-205ENST00000555402 HYAL3O43820 417 aaPredicted RBP10.71□□□□□ -0.69
VRK1-205ENST00000555402 LENG1Q96BZ8 264 aaPredicted RBP10.71□□□□□ -0.69
VRK1-205ENST00000555402 HSH2DQ96JZ2 352 aa10.71□□□□□ -0.69
VRK1-205ENST00000555402 NRG1Q02297 640 aaPredicted RBP10.7□□□□□ -0.7
VRK1-205ENST00000555402 NFATC2IPQ8NCF5 419 aa10.7□□□□□ -0.7
VRK1-205ENST00000555402 RAC1P63000 192 aa10.69□□□□□ -0.7
VRK1-205ENST00000555402 SHISA2Q6UWI4 295 aa10.69□□□□□ -0.7
VRK1-205ENST00000555402 BHMTQ93088 406 aa10.69□□□□□ -0.7
VRK1-205ENST00000555402 HCN4Q9Y3Q4 1203 aa10.69□□□□□ -0.7
VRK1-205ENST00000555402 ZNF280CQ8ND82 737 aa10.68□□□□□ -0.7
VRK1-205ENST00000555402 TP53INP1Q96A56 240 aa10.68□□□□□ -0.7
VRK1-205ENST00000555402 ALG2Q9H553 416 aa10.68□□□□□ -0.7
VRK1-205ENST00000555402 PSMA6P60900 246 aaKnown RBP10.67□□□□□ -0.7
VRK1-205ENST00000555402 TYRO3Q06418 890 aa10.67□□□□□ -0.7
VRK1-205ENST00000555402 SUSD3Q96L08 255 aa10.67□□□□□ -0.7
VRK1-205ENST00000555402 UBE2OQ9C0C9 1292 aaKnown RBP10.67□□□□□ -0.7
VRK1-205ENST00000555402 PHACTR1Q9C0D0 580 aa10.67□□□□□ -0.7
VRK1-205ENST00000555402 JPH1Q9HDC5 661 aaPredicted RBP10.67□□□□□ -0.7
VRK1-205ENST00000555402 HIRAP54198 1017 aaPredicted RBP10.66□□□□□ -0.7
VRK1-205ENST00000555402 TBC1D8BQ0IIM8 1120 aa10.66□□□□□ -0.7
VRK1-205ENST00000555402 DEPDC4Q8N2C3 294 aa10.66□□□□□ -0.7
VRK1-205ENST00000555402 IGFLR1Q9H665 355 aa10.66□□□□□ -0.7
VRK1-205ENST00000555402 SLC6A14Q9UN76 642 aa10.66□□□□□ -0.7
VRK1-205ENST00000555402 CHMP3Q9Y3E7 222 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms