RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 WNK3Q9BYP7 1800 aa28.94■■■□□ 2.22
STRN3-207ENST00000555358 SRCIN1Q9C0H9 1055 aa28.94■■■□□ 2.22
STRN3-207ENST00000555358 GNAI2P04899 355 aa28.93■■■□□ 2.22
STRN3-207ENST00000555358 MYL6BP14649 208 aa28.93■■■□□ 2.22
STRN3-207ENST00000555358 PIP4K2AP48426 406 aaPredicted RBP28.93■■■□□ 2.22
STRN3-207ENST00000555358 AIMP1Q12904 312 aaKnown RBP28.93■■■□□ 2.22
STRN3-207ENST00000555358 BEND3Q5T5X7 828 aa28.93■■■□□ 2.22
STRN3-207ENST00000555358 UBR2Q8IWV8 1755 aa28.93■■■□□ 2.22
STRN3-207ENST00000555358 MAP3K2Q9Y2U5 619 aa28.93■■■□□ 2.22
STRN3-207ENST00000555358 PAPPAQ13219 1627 aa28.92■■■□□ 2.22
STRN3-207ENST00000555358 KAT6BQ8WYB5 2073 aa28.92■■■□□ 2.22
STRN3-207ENST00000555358 GNAI3P08754 354 aa28.92■■■□□ 2.22
STRN3-207ENST00000555358 PKP1Q13835 747 aa28.92■■■□□ 2.22
STRN3-207ENST00000555358 OSBPL3Q9H4L5 887 aa28.92■■■□□ 2.22
STRN3-207ENST00000555358 TRIM44Q96DX7 344 aaPredicted RBP28.91■■■□□ 2.22
STRN3-207ENST00000555358 CWC22Q9HCG8 908 aaKnown RBP28.91■■■□□ 2.22
STRN3-207ENST00000555358 REC8O95072 547 aa28.9■■■□□ 2.22
STRN3-207ENST00000555358 KSR2Q6VAB6 950 aa28.9■■■□□ 2.22
STRN3-207ENST00000555358 KCPQ6ZWJ8 1503 aa28.9■■■□□ 2.22
STRN3-207ENST00000555358 ST18O60284 1047 aa28.9■■■□□ 2.22
STRN3-207ENST00000555358 MCTP1Q6DN14 999 aa28.9■■■□□ 2.22
STRN3-207ENST00000555358 NAP1L5Q96NT1 182 aaPredicted RBP28.9■■■□□ 2.22
STRN3-207ENST00000555358 HMMRO75330 724 aa28.89■■■□□ 2.22
STRN3-207ENST00000555358 LMBRD1Q9NUN5 540 aa28.89■■■□□ 2.22
STRN3-207ENST00000555358 LRRFIP2Q9Y608 721 aaKnown RBP28.89■■■□□ 2.22
STRN3-207ENST00000555358 LAMB4A4D0S4 1761 aa28.89■■■□□ 2.22
STRN3-207ENST00000555358 SPATA31A1Q5TZJ5 1347 aa28.89■■■□□ 2.22
STRN3-207ENST00000555358 PPP1R9BQ96SB3 815 aa28.89■■■□□ 2.21
STRN3-207ENST00000555358 TUBGCP6Q96RT7 1819 aa28.88■■■□□ 2.21
STRN3-207ENST00000555358 ERC2O15083 957 aa28.88■■■□□ 2.21
STRN3-207ENST00000555358 PTCD1O75127 700 aaKnown RBP28.88■■■□□ 2.21
STRN3-207ENST00000555358 AEBP2Q6ZN18 517 aaPredicted RBP28.88■■■□□ 2.21
STRN3-207ENST00000555358 ITGB4P16144 1822 aa28.88■■■□□ 2.21
STRN3-207ENST00000555358 NASPP49321 788 aaPredicted RBP28.88■■■□□ 2.21
STRN3-207ENST00000555358 ZNF445P59923 1031 aa28.88■■■□□ 2.21
STRN3-207ENST00000555358 CCDC173Q0VFZ6 552 aa28.88■■■□□ 2.21
STRN3-207ENST00000555358 ZGPATQ8N5A5 531 aaKnown RBP28.88■■■□□ 2.21
STRN3-207ENST00000555358 TMOD3Q9NYL9 352 aa28.88■■■□□ 2.21
STRN3-207ENST00000555358 EXOC5O00471 708 aa28.87■■■□□ 2.21
STRN3-207ENST00000555358 UBTFL1P0CB47 393 aaPredicted RBP28.87■■■□□ 2.21
STRN3-207ENST00000555358 PDE1AP54750 535 aa28.87■■■□□ 2.21
STRN3-207ENST00000555358 LRP10Q7Z4F1 713 aa28.87■■■□□ 2.21
STRN3-207ENST00000555358 XAGE3Q8WTP9 111 aa28.86■■■□□ 2.21
STRN3-207ENST00000555358 NBPF7P0C2Y1 421 aaPredicted RBP28.86■■■□□ 2.21
STRN3-207ENST00000555358 SLIT2O94813 1529 aa28.86■■■□□ 2.21
STRN3-207ENST00000555358 COPS6Q7L5N1 327 aa28.85■■■□□ 2.21
STRN3-207ENST00000555358 NWD2Q9ULI1 1742 aa28.85■■■□□ 2.21
STRN3-207ENST00000555358 PNMA6EA0A0J9YXQ4 647 aa28.85■■■□□ 2.21
STRN3-207ENST00000555358 PIGBQ92521 554 aa28.85■■■□□ 2.21
STRN3-207ENST00000555358 ZDHHC9Q9Y397 364 aa28.85■■■□□ 2.21
STRN3-207ENST00000555358 TNS2Q63HR2 1409 aa28.85■■■□□ 2.21
STRN3-207ENST00000555358 SALL3Q9BXA9 1300 aa28.84■■■□□ 2.21
STRN3-207ENST00000555358 DDX58O95786 925 aaKnown RBP28.84■■■□□ 2.21
STRN3-207ENST00000555358 CWF19L2Q2TBE0 894 aaKnown RBP28.84■■■□□ 2.21
STRN3-207ENST00000555358 ASAP1Q9ULH1 1129 aa28.82■■■□□ 2.2
STRN3-207ENST00000555358 ATP8B2P98198 1209 aa28.82■■■□□ 2.2
STRN3-207ENST00000555358 CCDC9Q9Y3X0 531 aaKnown RBP28.82■■■□□ 2.2
STRN3-207ENST00000555358 SPATA31A5Q5VU36 1347 aa28.82■■■□□ 2.2
STRN3-207ENST00000555358 SPATA31A7Q8IWB4 1347 aa28.82■■■□□ 2.2
STRN3-207ENST00000555358 ZSCAN23Q3MJ62 389 aa28.81■■■□□ 2.2
STRN3-207ENST00000555358 RIC3Q7Z5B4 369 aa28.81■■■□□ 2.2
STRN3-207ENST00000555358 JCADQ9P266 1359 aa28.81■■■□□ 2.2
STRN3-207ENST00000555358 CAVIN1Q6NZI2 390 aaKnown RBP28.81■■■□□ 2.2
STRN3-207ENST00000555358 CERKQ8TCT0 537 aa28.81■■■□□ 2.2
STRN3-207ENST00000555358 NBPF26B4DH59 902 aa28.8■■■□□ 2.2
STRN3-207ENST00000555358 NBPF14Q5TI25 921 aa28.8■■■□□ 2.2
STRN3-207ENST00000555358 NBPF10Q6P3W6 841 aaKnown RBP28.8■■■□□ 2.2
STRN3-207ENST00000555358 NBPF15Q8N660 670 aa28.8■■■□□ 2.2
STRN3-207ENST00000555358 THRAP3Q9Y2W1 955 aaKnown RBP28.8■■■□□ 2.2
STRN3-207ENST00000555358 C8orf37Q96NL8 207 aa28.79■■■□□ 2.2
STRN3-207ENST00000555358 ALDH1L1O75891 902 aa28.78■■■□□ 2.2
STRN3-207ENST00000555358 EXOC6BQ9Y2D4 811 aa28.78■■■□□ 2.2
STRN3-207ENST00000555358 A1BGP04217 495 aa28.78■■■□□ 2.2
STRN3-207ENST00000555358 ATG3Q9NT62 314 aa28.78■■■□□ 2.2
STRN3-207ENST00000555358 DDB1Q16531 1140 aa28.77■■■□□ 2.2
STRN3-207ENST00000555358 LINS1Q8NG48 757 aa28.77■■■□□ 2.2
STRN3-207ENST00000555358 UBE2Q2Q8WVN8 375 aa28.77■■■□□ 2.2
STRN3-207ENST00000555358 CDCA7Q9BWT1 371 aaPredicted RBP28.77■■■□□ 2.2
STRN3-207ENST00000555358 IGKV5-2P06315 115 aa28.77■■■□□ 2.2
STRN3-207ENST00000555358 ANKRD13DQ6ZTN6 518 aa28.77■■■□□ 2.2
STRN3-207ENST00000555358 GPT2Q8TD30 523 aa28.77■■■□□ 2.2
STRN3-207ENST00000555358 LRP6O75581 1613 aa28.76■■■□□ 2.19
STRN3-207ENST00000555358 NCLP19338 710 aaKnown RBP28.76■■■□□ 2.19
STRN3-207ENST00000555358 NGLY1Q96IV0 654 aa28.76■■■□□ 2.19
STRN3-207ENST00000555358 TSHZ3Q63HK5 1081 aa28.75■■■□□ 2.19
STRN3-207ENST00000555358 SYTL4Q96C24 671 aaPredicted RBP28.75■■■□□ 2.19
STRN3-207ENST00000555358 ESYT1Q9BSJ8 1104 aa28.75■■■□□ 2.19
STRN3-207ENST00000555358 C9orf78Q9NZ63 289 aaPredicted RBP28.75■■■□□ 2.19
STRN3-207ENST00000555358 BCL9O00512 1426 aa28.75■■■□□ 2.19
STRN3-207ENST00000555358 DOT1LQ8TEK3 1739 aa28.75■■■□□ 2.19
STRN3-207ENST00000555358 PRPF40AO75400 957 aaKnown RBP28.75■■■□□ 2.19
STRN3-207ENST00000555358 UNC5CLQ8IV45 518 aa28.75■■■□□ 2.19
STRN3-207ENST00000555358 PPP1R42Q7Z4L9 355 aa28.74■■■□□ 2.19
STRN3-207ENST00000555358 ARFGEF2Q9Y6D5 1785 aa28.74■■■□□ 2.19
STRN3-207ENST00000555358 ANP32BQ92688 251 aaKnown RBP28.74■■■□□ 2.19
STRN3-207ENST00000555358 MYD88Q99836 296 aa28.74■■■□□ 2.19
STRN3-207ENST00000555358 LRRCC1Q9C099 1032 aa28.74■■■□□ 2.19
STRN3-207ENST00000555358 TMX3Q96JJ7 454 aa28.73■■■□□ 2.19
STRN3-207ENST00000555358 METTL22Q9BUU2 404 aaPredicted RBP28.73■■■□□ 2.19
STRN3-207ENST00000555358 NEK4P51957 841 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms