RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 GOLGA2Q08379 1002 aa26.48■■□□□ 1.83
FOXN3-209ENST00000555353 TBC1D9BQ66K14 1250 aa26.48■■□□□ 1.83
FOXN3-209ENST00000555353 DBF4Q9UBU7 674 aaPredicted RBP26.48■■□□□ 1.83
FOXN3-209ENST00000555353 RGL2O15211 777 aa26.46■■□□□ 1.83
FOXN3-209ENST00000555353 TTLL7Q6ZT98 887 aa26.46■■□□□ 1.83
FOXN3-209ENST00000555353 TSPYL6Q8N831 410 aa26.46■■□□□ 1.83
FOXN3-209ENST00000555353 MAP3K15Q6ZN16 1313 aa26.46■■□□□ 1.83
FOXN3-209ENST00000555353 AFDNP55196 1824 aaKnown RBP26.46■■□□□ 1.83
FOXN3-209ENST00000555353 LRP10Q7Z4F1 713 aa26.46■■□□□ 1.83
FOXN3-209ENST00000555353 SETDB2Q96T68 719 aa26.46■■□□□ 1.83
FOXN3-209ENST00000555353 SPINK5Q9NQ38 1064 aaPredicted RBP26.46■■□□□ 1.83
FOXN3-209ENST00000555353 NUP98P52948 1817 aa26.45■■□□□ 1.82
FOXN3-209ENST00000555353 ERVV-1B6SEH8 477 aa26.45■■□□□ 1.82
FOXN3-209ENST00000555353 TWISTNBQ3B726 338 aaPredicted RBP26.45■■□□□ 1.82
FOXN3-209ENST00000555353 KIF13BQ9NQT8 1826 aa26.44■■□□□ 1.82
FOXN3-209ENST00000555353 SERPINB2P05120 415 aa26.44■■□□□ 1.82
FOXN3-209ENST00000555353 CCDC30Q5VVM6 783 aa26.44■■□□□ 1.82
FOXN3-209ENST00000555353 NLGN2Q8NFZ4 835 aa26.44■■□□□ 1.82
FOXN3-209ENST00000555353 ZBTB3Q9H5J0 574 aa26.44■■□□□ 1.82
FOXN3-209ENST00000555353 CARMIL3Q8ND23 1372 aa26.44■■□□□ 1.82
FOXN3-209ENST00000555353 AIMP1Q12904 312 aaKnown RBP26.43■■□□□ 1.82
FOXN3-209ENST00000555353 HLFQ16534 295 aa26.43■■□□□ 1.82
FOXN3-209ENST00000555353 COPS6Q7L5N1 327 aa26.43■■□□□ 1.82
FOXN3-209ENST00000555353 XAGE3Q8WTP9 111 aa26.43■■□□□ 1.82
FOXN3-209ENST00000555353 HYPKQ9NX55 129 aa26.43■■□□□ 1.82
FOXN3-209ENST00000555353 C10orf71Q711Q0 1435 aa26.43■■□□□ 1.82
FOXN3-209ENST00000555353 DCAF8L1A6NGE4 600 aa26.42■■□□□ 1.82
FOXN3-209ENST00000555353 NIP7Q9Y221 180 aaKnown RBP eCLIP26.41■■□□□ 1.82
FOXN3-209ENST00000555353 NRXN2Q9P2S2 1712 aa26.41■■□□□ 1.82
FOXN3-209ENST00000555353 EXOSC9Q06265 439 aaKnown RBP26.41■■□□□ 1.82
FOXN3-209ENST00000555353 NPHP1O15259 732 aa26.4■■□□□ 1.82
FOXN3-209ENST00000555353 E9PSI1 815 aa26.39■■□□□ 1.82
FOXN3-209ENST00000555353 STK31Q9BXU1 1019 aa26.39■■□□□ 1.82
FOXN3-209ENST00000555353 GIGYF2Q6Y7W6 1299 aaKnown RBP26.37■■□□□ 1.81
FOXN3-209ENST00000555353 TGFB2P61812 414 aa26.37■■□□□ 1.81
FOXN3-209ENST00000555353 NBPF5PQ86XG9 351 aaPredicted RBP26.37■■□□□ 1.81
FOXN3-209ENST00000555353 CNBD1Q8NA66 436 aa26.37■■□□□ 1.81
FOXN3-209ENST00000555353 ATP10DQ9P241 1426 aa26.36■■□□□ 1.81
FOXN3-209ENST00000555353 N4BP2Q86UW6 1770 aaPredicted RBP26.36■■□□□ 1.81
FOXN3-209ENST00000555353 CACNA1FO60840 1977 aa26.35■■□□□ 1.81
FOXN3-209ENST00000555353 TCERG1O14776 1098 aaKnown RBP26.34■■□□□ 1.81
FOXN3-209ENST00000555353 VAMP4O75379 141 aa26.34■■□□□ 1.81
FOXN3-209ENST00000555353 SLFN5Q08AF3 891 aa26.34■■□□□ 1.81
FOXN3-209ENST00000555353 ANKRD13DQ6ZTN6 518 aa26.34■■□□□ 1.81
FOXN3-209ENST00000555353 PELP1Q8IZL8 1130 aaKnown RBP26.34■■□□□ 1.81
FOXN3-209ENST00000555353 PXDNLA1KZ92 1463 aa26.34■■□□□ 1.81
FOXN3-209ENST00000555353 GPTP24298 496 aa26.33■■□□□ 1.81
FOXN3-209ENST00000555353 ST5P78524 1137 aa26.33■■□□□ 1.81
FOXN3-209ENST00000555353 HSP90AB3PQ58FF7 597 aa26.33■■□□□ 1.81
FOXN3-209ENST00000555353 PRR5LQ6MZQ0 368 aa26.33■■□□□ 1.81
FOXN3-209ENST00000555353 PLBD2Q8NHP8 589 aa26.33■■□□□ 1.81
FOXN3-209ENST00000555353 PHAXQ9H814 394 aaKnown RBP26.33■■□□□ 1.81
FOXN3-209ENST00000555353 ANKRD36CQ5JPF3 1778 aa26.33■■□□□ 1.81
FOXN3-209ENST00000555353 GOLGB1Q14789 3259 aaKnown RBP26.33■■□□□ 1.81
FOXN3-209ENST00000555353 KIAA1551Q9HCM1 1747 aa26.33■■□□□ 1.81
FOXN3-209ENST00000555353 FAM177BA6PVY3 158 aa26.33■■□□□ 1.8
FOXN3-209ENST00000555353 GPR162Q16538 588 aa26.33■■□□□ 1.8
FOXN3-209ENST00000555353 TPTE2Q6XPS3 522 aa26.33■■□□□ 1.8
FOXN3-209ENST00000555353 CDCA7LQ96GN5 454 aa26.33■■□□□ 1.8
FOXN3-209ENST00000555353 A0A0G2JLW4 131 aa26.32■■□□□ 1.8
FOXN3-209ENST00000555353 DPEP1P16444 411 aa26.31■■□□□ 1.8
FOXN3-209ENST00000555353 ZNF34Q8IZ26 560 aa26.31■■□□□ 1.8
FOXN3-209ENST00000555353 SLC4A2P04920 1241 aa26.3■■□□□ 1.8
FOXN3-209ENST00000555353 GTF2E1P29083 439 aaPredicted RBP26.3■■□□□ 1.8
FOXN3-209ENST00000555353 CCDC24Q8N4L8 307 aa26.3■■□□□ 1.8
FOXN3-209ENST00000555353 NYXQ9GZU5 481 aa26.3■■□□□ 1.8
FOXN3-209ENST00000555353 ARFGEF2Q9Y6D5 1785 aa26.3■■□□□ 1.8
FOXN3-209ENST00000555353 DDX58O95786 925 aaKnown RBP26.29■■□□□ 1.8
FOXN3-209ENST00000555353 TCIRG1Q13488 830 aa26.29■■□□□ 1.8
FOXN3-209ENST00000555353 RIC3Q7Z5B4 369 aa26.29■■□□□ 1.8
FOXN3-209ENST00000555353 BRIP1Q9BX63 1249 aa26.29■■□□□ 1.8
FOXN3-209ENST00000555353 WWC3Q9ULE0 1092 aa26.29■■□□□ 1.8
FOXN3-209ENST00000555353 ANKRD31Q8N7Z5 1873 aa26.29■■□□□ 1.8
FOXN3-209ENST00000555353 UBN2Q6ZU65 1347 aa26.29■■□□□ 1.8
FOXN3-209ENST00000555353 PARP10Q53GL7 1025 aa26.29■■□□□ 1.8
FOXN3-209ENST00000555353 CHRNA5P30532 468 aa26.27■■□□□ 1.8
FOXN3-209ENST00000555353 PDE6BP35913 854 aa26.27■■□□□ 1.8
FOXN3-209ENST00000555353 PPP1R42Q7Z4L9 355 aa26.27■■□□□ 1.8
FOXN3-209ENST00000555353 BRCA1P38398 1863 aaKnown RBP26.26■■□□□ 1.79
FOXN3-209ENST00000555353 SUSD4Q5VX71 490 aa26.26■■□□□ 1.79
FOXN3-209ENST00000555353 IBTKQ9P2D0 1353 aaPredicted RBP26.26■■□□□ 1.79
FOXN3-209ENST00000555353 H0YIN7 160 aa26.25■■□□□ 1.79
FOXN3-209ENST00000555353 CENPBP07199 599 aaPredicted RBP26.25■■□□□ 1.79
FOXN3-209ENST00000555353 C2CD5Q86YS7 1000 aa26.25■■□□□ 1.79
FOXN3-209ENST00000555353 PDZRN3Q9UPQ7 1066 aa26.25■■□□□ 1.79
FOXN3-209ENST00000555353 YBX3P16989 372 aaKnown RBP eCLIP26.24■■□□□ 1.79
FOXN3-209ENST00000555353 TRMT2AQ8IZ69 625 aaKnown RBP26.24■■□□□ 1.79
FOXN3-209ENST00000555353 PIM2Q9P1W9 311 aa26.24■■□□□ 1.79
FOXN3-209ENST00000555353 KCNA3P22001 575 aa26.24■■□□□ 1.79
FOXN3-209ENST00000555353 NUTM1Q86Y26 1132 aa26.24■■□□□ 1.79
FOXN3-209ENST00000555353 UTP14AQ9BVJ6 771 aaKnown RBP26.24■■□□□ 1.79
FOXN3-209ENST00000555353 UTRNP46939 3433 aa26.23■■□□□ 1.79
FOXN3-209ENST00000555353 DLEC1Q9Y238 1755 aa26.23■■□□□ 1.79
FOXN3-209ENST00000555353 FLIIQ13045 1269 aa26.23■■□□□ 1.79
FOXN3-209ENST00000555353 G2E3Q7L622 706 aa26.23■■□□□ 1.79
FOXN3-209ENST00000555353 NLRP10Q86W26 655 aa26.23■■□□□ 1.79
FOXN3-209ENST00000555353 KSR2Q6VAB6 950 aa26.22■■□□□ 1.79
FOXN3-209ENST00000555353 BCS1LQ9Y276 419 aa26.22■■□□□ 1.79
FOXN3-209ENST00000555353 ATP5J2-PTCD1G3V325 749 aa26.21■■□□□ 1.79
FOXN3-209ENST00000555353 GRIN3BO60391 1043 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms