RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 ANKRD13DQ6ZTN6 518 aa18.25■□□□□ 0.51
CHD8-208ENST00000555301 BCL2L13Q9BXK5 485 aa18.25■□□□□ 0.51
CHD8-208ENST00000555301 PDGFDQ9GZP0 370 aaPredicted RBP18.25■□□□□ 0.51
CHD8-208ENST00000555301 SRP68Q9UHB9 627 aaKnown RBP18.25■□□□□ 0.51
CHD8-208ENST00000555301 QSER1Q2KHR3 1735 aa18.24■□□□□ 0.51
CHD8-208ENST00000555301 GYS1P13807 737 aa18.24■□□□□ 0.51
CHD8-208ENST00000555301 G2E3Q7L622 706 aa18.24■□□□□ 0.51
CHD8-208ENST00000555301 NLGN1Q8N2Q7 840 aa18.24■□□□□ 0.51
CHD8-208ENST00000555301 PLBD2Q8NHP8 589 aa18.24■□□□□ 0.51
CHD8-208ENST00000555301 ZBTB3Q9H5J0 574 aa18.24■□□□□ 0.51
CHD8-208ENST00000555301 FKBP5Q13451 457 aaPredicted RBP18.23■□□□□ 0.51
CHD8-208ENST00000555301 MTFR1LQ9H019 292 aa18.23■□□□□ 0.51
CHD8-208ENST00000555301 PTPRCP08575 1304 aa18.23■□□□□ 0.51
CHD8-208ENST00000555301 HSP90AB3PQ58FF7 597 aa18.22■□□□□ 0.51
CHD8-208ENST00000555301 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
CHD8-208ENST00000555301 GIGYF2Q6Y7W6 1299 aaKnown RBP18.22■□□□□ 0.51
CHD8-208ENST00000555301 RIC3Q7Z5B4 369 aa18.22■□□□□ 0.51
CHD8-208ENST00000555301 BCL2L12Q9HB09 334 aa18.22■□□□□ 0.51
CHD8-208ENST00000555301 RCAN3Q9UKA8 241 aa18.22■□□□□ 0.51
CHD8-208ENST00000555301 KIF16BQ96L93 1317 aa18.22■□□□□ 0.51
CHD8-208ENST00000555301 FKBP8Q14318 412 aa18.21■□□□□ 0.51
CHD8-208ENST00000555301 PI4KAP2A4QPH2 592 aa18.2■□□□□ 0.5
CHD8-208ENST00000555301 BCAR3O75815 825 aa18.2■□□□□ 0.5
CHD8-208ENST00000555301 ZBTB7AO95365 584 aa18.2■□□□□ 0.5
CHD8-208ENST00000555301 HLFQ16534 295 aa18.2■□□□□ 0.5
CHD8-208ENST00000555301 PI4KAP1Q8N8J0 262 aa18.2■□□□□ 0.5
CHD8-208ENST00000555301 TUBGCP6Q96RT7 1819 aa18.2■□□□□ 0.5
CHD8-208ENST00000555301 IPO8O15397 1037 aaKnown RBP18.19■□□□□ 0.5
CHD8-208ENST00000555301 ARHGAP45Q92619 1136 aa18.19■□□□□ 0.5
CHD8-208ENST00000555301 NOB1Q9ULX3 412 aaKnown RBP18.19■□□□□ 0.5
CHD8-208ENST00000555301 MSL1Q68DK7 614 aa18.18■□□□□ 0.5
CHD8-208ENST00000555301 MAP3K2Q9Y2U5 619 aa18.18■□□□□ 0.5
CHD8-208ENST00000555301 C4AP0C0L4 1744 aa18.18■□□□□ 0.5
CHD8-208ENST00000555301 ADCY9O60503 1353 aa18.17■□□□□ 0.5
CHD8-208ENST00000555301 CASZ1Q86V15 1759 aa18.17■□□□□ 0.5
CHD8-208ENST00000555301 ATP10DQ9P241 1426 aa18.17■□□□□ 0.5
CHD8-208ENST00000555301 POLD1P28340 1107 aa18.17■□□□□ 0.5
CHD8-208ENST00000555301 TM4SF1P30408 202 aa18.17■□□□□ 0.5
CHD8-208ENST00000555301 NEXNQ0ZGT2 675 aa18.17■□□□□ 0.5
CHD8-208ENST00000555301 TCIRG1Q13488 830 aa18.17■□□□□ 0.5
CHD8-208ENST00000555301 TBC1D9BQ66K14 1250 aa18.17■□□□□ 0.5
CHD8-208ENST00000555301 DNAAF4Q8WXU2 420 aa18.17■□□□□ 0.5
CHD8-208ENST00000555301 SETDB2Q96T68 719 aa18.17■□□□□ 0.5
CHD8-208ENST00000555301 METTL22Q9BUU2 404 aaPredicted RBP18.17■□□□□ 0.5
CHD8-208ENST00000555301 API5Q9BZZ5 524 aaKnown RBP18.17■□□□□ 0.5
CHD8-208ENST00000555301 SPON1Q9HCB6 807 aa18.17■□□□□ 0.5
CHD8-208ENST00000555301 NIP7Q9Y221 180 aaKnown RBP eCLIP18.17■□□□□ 0.5
CHD8-208ENST00000555301 ATF5Q9Y2D1 282 aaPredicted RBP18.17■□□□□ 0.5
CHD8-208ENST00000555301 SCN7AQ01118 1682 aa18.16■□□□□ 0.5
CHD8-208ENST00000555301 NFIXQ14938 502 aa18.16■□□□□ 0.5
CHD8-208ENST00000555301 ZNF34Q8IZ26 560 aa18.16■□□□□ 0.5
CHD8-208ENST00000555301 FRAT1Q92837 279 aaPredicted RBP18.16■□□□□ 0.5
CHD8-208ENST00000555301 MMP10P09238 476 aa18.15■□□□□ 0.5
CHD8-208ENST00000555301 PARP10Q53GL7 1025 aa18.15■□□□□ 0.5
CHD8-208ENST00000555301 BICDL1Q6ZP65 573 aa18.15■□□□□ 0.5
CHD8-208ENST00000555301 MYD88Q99836 296 aa18.15■□□□□ 0.5
CHD8-208ENST00000555301 PARP3Q9Y6F1 533 aa18.15■□□□□ 0.5
CHD8-208ENST00000555301 CARMIL3Q8ND23 1372 aa18.15■□□□□ 0.5
CHD8-208ENST00000555301 F6X3S4 739 aa18.14■□□□□ 0.49
CHD8-208ENST00000555301 TRIM28Q13263 835 aaKnown RBP18.14■□□□□ 0.49
CHD8-208ENST00000555301 ZKSCAN2Q63HK3 967 aa18.14■□□□□ 0.49
CHD8-208ENST00000555301 ATF7IPQ6VMQ6 1270 aa18.14■□□□□ 0.49
CHD8-208ENST00000555301 ISCA1Q9BUE6 129 aa18.14■□□□□ 0.49
CHD8-208ENST00000555301 BCORQ6W2J9 1755 aa18.13■□□□□ 0.49
CHD8-208ENST00000555301 POLRMTO00411 1230 aaKnown RBP18.13■□□□□ 0.49
CHD8-208ENST00000555301 GPTP24298 496 aa18.13■□□□□ 0.49
CHD8-208ENST00000555301 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.13■□□□□ 0.49
CHD8-208ENST00000555301 ATP5J2-PTCD1G3V325 749 aa18.12■□□□□ 0.49
CHD8-208ENST00000555301 DDR1Q08345 913 aa18.12■□□□□ 0.49
CHD8-208ENST00000555301 SLC4A10Q6U841 1118 aa18.12■□□□□ 0.49
CHD8-208ENST00000555301 PPP1R42Q7Z4L9 355 aa18.12■□□□□ 0.49
CHD8-208ENST00000555301 NLRP10Q86W26 655 aa18.12■□□□□ 0.49
CHD8-208ENST00000555301 CCDC191Q8NCU4 936 aa18.12■□□□□ 0.49
CHD8-208ENST00000555301 LINS1Q8NG48 757 aa18.12■□□□□ 0.49
CHD8-208ENST00000555301 SGIP1Q9BQI5 828 aa18.12■□□□□ 0.49
CHD8-208ENST00000555301 SERPINB2P05120 415 aa18.11■□□□□ 0.49
CHD8-208ENST00000555301 TRIM27P14373 513 aa18.11■□□□□ 0.49
CHD8-208ENST00000555301 PTGER2P43116 358 aa18.11■□□□□ 0.49
CHD8-208ENST00000555301 BEND3Q5T5X7 828 aa18.11■□□□□ 0.49
CHD8-208ENST00000555301 TPTE2Q6XPS3 522 aa18.11■□□□□ 0.49
CHD8-208ENST00000555301 NBPF5PQ86XG9 351 aaPredicted RBP18.11■□□□□ 0.49
CHD8-208ENST00000555301 NYXQ9GZU5 481 aa18.11■□□□□ 0.49
CHD8-208ENST00000555301 UBN2Q6ZU65 1347 aa18.11■□□□□ 0.49
CHD8-208ENST00000555301 CACNA1FO60840 1977 aa18.11■□□□□ 0.49
CHD8-208ENST00000555301 IBTKQ9P2D0 1353 aaPredicted RBP18.1■□□□□ 0.49
CHD8-208ENST00000555301 IGKV5-2P06315 115 aa18.1■□□□□ 0.49
CHD8-208ENST00000555301 MS4A1P11836 297 aa18.1■□□□□ 0.49
CHD8-208ENST00000555301 SRCIN1Q9C0H9 1055 aa18.1■□□□□ 0.49
CHD8-208ENST00000555301 CWC25Q9NXE8 425 aaPredicted RBP18.1■□□□□ 0.49
CHD8-208ENST00000555301 PXDNLA1KZ92 1463 aa18.09■□□□□ 0.49
CHD8-208ENST00000555301 RNF123Q5XPI4 1314 aa18.09■□□□□ 0.49
CHD8-208ENST00000555301 NEURL1BA8MQ27 555 aa18.09■□□□□ 0.49
CHD8-208ENST00000555301 NPHP1O15259 732 aa18.09■□□□□ 0.49
CHD8-208ENST00000555301 ALDH1L1O75891 902 aa18.09■□□□□ 0.49
CHD8-208ENST00000555301 CCT4P50991 539 aaKnown RBP18.09■□□□□ 0.49
CHD8-208ENST00000555301 SUSD4Q5VX71 490 aa18.09■□□□□ 0.49
CHD8-208ENST00000555301 UTP14AQ9BVJ6 771 aaKnown RBP18.09■□□□□ 0.49
CHD8-208ENST00000555301 ABCC4O15439 1325 aa18.08■□□□□ 0.49
CHD8-208ENST00000555301 FAM177BA6PVY3 158 aa18.08■□□□□ 0.48
CHD8-208ENST00000555301 GTF2E1P29083 439 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms