RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 PRAMEF22A3QJZ6 481 aa17.63■□□□□ 0.41
XRCC3-212ENST00000555231 BTBD11A6QL63 1104 aa17.63■□□□□ 0.41
XRCC3-212ENST00000555231 POTEIP0CG38 1075 aa17.63■□□□□ 0.41
XRCC3-212ENST00000555231 POTEJP0CG39 1038 aa17.63■□□□□ 0.41
XRCC3-212ENST00000555231 ST5P78524 1137 aa17.63■□□□□ 0.41
XRCC3-212ENST00000555231 PRPF40BQ6NWY9 871 aaKnown RBP17.63■□□□□ 0.41
XRCC3-212ENST00000555231 PHACTR3Q96KR7 559 aa17.63■□□□□ 0.41
XRCC3-212ENST00000555231 USP16Q9Y5T5 823 aa17.63■□□□□ 0.41
XRCC3-212ENST00000555231 PCNTO95613 3336 aa17.63■□□□□ 0.41
XRCC3-212ENST00000555231 SRGNP10124 158 aa17.62■□□□□ 0.41
XRCC3-212ENST00000555231 PRKAR2BP31323 418 aa17.62■□□□□ 0.41
XRCC3-212ENST00000555231 STYK1Q6J9G0 422 aa17.62■□□□□ 0.41
XRCC3-212ENST00000555231 CNKSR1Q969H4 720 aa17.62■□□□□ 0.41
XRCC3-212ENST00000555231 LTBP3Q9NS15 1303 aa17.62■□□□□ 0.41
XRCC3-212ENST00000555231 CEMIPQ8WUJ3 1361 aa17.62■□□□□ 0.41
XRCC3-212ENST00000555231 CHADLQ6NUI6 762 aa17.61■□□□□ 0.41
XRCC3-212ENST00000555231 MASTLQ96GX5 879 aa17.61■□□□□ 0.41
XRCC3-212ENST00000555231 MKRN1Q9UHC7 482 aaKnown RBP17.61■□□□□ 0.41
XRCC3-212ENST00000555231 RSPH6AQ9H0K4 717 aa17.6■□□□□ 0.41
XRCC3-212ENST00000555231 NPC1L1Q9UHC9 1359 aa17.6■□□□□ 0.41
XRCC3-212ENST00000555231 NBPF5PQ86XG9 351 aaPredicted RBP17.59■□□□□ 0.41
XRCC3-212ENST00000555231 FAM177BA6PVY3 158 aa17.58■□□□□ 0.4
XRCC3-212ENST00000555231 SOGA3Q5TF21 947 aa17.57■□□□□ 0.4
XRCC3-212ENST00000555231 MCM10Q7L590 875 aa17.57■□□□□ 0.4
XRCC3-212ENST00000555231 CREBZFQ9NS37 354 aa17.57■□□□□ 0.4
XRCC3-212ENST00000555231 SCN4AP35499 1836 aa17.56■□□□□ 0.4
XRCC3-212ENST00000555231 DCTN1Q14203 1278 aa17.56■□□□□ 0.4
XRCC3-212ENST00000555231 CCDC93Q567U6 631 aa17.56■□□□□ 0.4
XRCC3-212ENST00000555231 OLFM4Q6UX06 510 aa17.56■□□□□ 0.4
XRCC3-212ENST00000555231 C7orf43Q8WVR3 580 aa17.56■□□□□ 0.4
XRCC3-212ENST00000555231 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
XRCC3-212ENST00000555231 SNRPA1P09661 255 aaKnown RBP17.55■□□□□ 0.4
XRCC3-212ENST00000555231 CLEC4GQ6UXB4 293 aa17.55■□□□□ 0.4
XRCC3-212ENST00000555231 RTF1Q92541 710 aaKnown RBP17.55■□□□□ 0.4
XRCC3-212ENST00000555231 NIP7Q9Y221 180 aaKnown RBP eCLIP17.55■□□□□ 0.4
XRCC3-212ENST00000555231 ZNF652Q9Y2D9 606 aa17.55■□□□□ 0.4
XRCC3-212ENST00000555231 ZNF541Q9H0D2 1346 aa17.54■□□□□ 0.4
XRCC3-212ENST00000555231 NBPF26B4DH59 902 aa17.54■□□□□ 0.4
XRCC3-212ENST00000555231 U2AF1L5P0DN76 240 aaPredicted RBP17.54■□□□□ 0.4
XRCC3-212ENST00000555231 NPR1P16066 1061 aa17.54■□□□□ 0.4
XRCC3-212ENST00000555231 U2AF1Q01081 240 aaKnown RBP eCLIP17.54■□□□□ 0.4
XRCC3-212ENST00000555231 NBPF10Q6P3W6 841 aaKnown RBP17.54■□□□□ 0.4
XRCC3-212ENST00000555231 NBPF15Q8N660 670 aa17.54■□□□□ 0.4
XRCC3-212ENST00000555231 TAF1DQ9H5J8 278 aaPredicted RBP17.54■□□□□ 0.4
XRCC3-212ENST00000555231 ZNF277Q9NRM2 450 aaPredicted RBP17.54■□□□□ 0.4
XRCC3-212ENST00000555231 IQCA1LA6NCM1 817 aa17.53■□□□□ 0.4
XRCC3-212ENST00000555231 FKBP4Q02790 459 aaKnown RBP eCLIP17.53■□□□□ 0.4
XRCC3-212ENST00000555231 EAPPQ56P03 285 aaPredicted RBP17.53■□□□□ 0.4
XRCC3-212ENST00000555231 LDHDQ86WU2 507 aa17.53■□□□□ 0.4
XRCC3-212ENST00000555231 NUDCQ9Y266 331 aa17.53■□□□□ 0.4
XRCC3-212ENST00000555231 PASKQ96RG2 1323 aa17.52■□□□□ 0.4
XRCC3-212ENST00000555231 HLFQ16534 295 aa17.52■□□□□ 0.4
XRCC3-212ENST00000555231 TPTE2Q6XPS3 522 aa17.52■□□□□ 0.4
XRCC3-212ENST00000555231 L3MBTL3Q96JM7 780 aaPredicted RBP17.52■□□□□ 0.4
XRCC3-212ENST00000555231 KLRG2A4D1S0 409 aaPredicted RBP17.51■□□□□ 0.39
XRCC3-212ENST00000555231 MIS18AQ9NYP9 233 aa17.51■□□□□ 0.39
XRCC3-212ENST00000555231 CLEC11AQ9Y240 323 aa17.51■□□□□ 0.39
XRCC3-212ENST00000555231 CNTNAP1P78357 1384 aa17.51■□□□□ 0.39
XRCC3-212ENST00000555231 LAMB4A4D0S4 1761 aa17.51■□□□□ 0.39
XRCC3-212ENST00000555231 FOXN1O15353 648 aa17.5■□□□□ 0.39
XRCC3-212ENST00000555231 ITGBL1O95965 494 aaPredicted RBP17.49■□□□□ 0.39
XRCC3-212ENST00000555231 GTF2E1P29083 439 aaPredicted RBP17.49■□□□□ 0.39
XRCC3-212ENST00000555231 PPP2R1AP30153 589 aa17.49■□□□□ 0.39
XRCC3-212ENST00000555231 SYNE4Q8N205 404 aa17.49■□□□□ 0.39
XRCC3-212ENST00000555231 NGEFQ8N5V2 710 aa17.49■□□□□ 0.39
XRCC3-212ENST00000555231 HACL1Q9UJ83 578 aa17.49■□□□□ 0.39
XRCC3-212ENST00000555231 NUP98P52948 1817 aa17.49■□□□□ 0.39
XRCC3-212ENST00000555231 DLG5Q8TDM6 1919 aa17.49■□□□□ 0.39
XRCC3-212ENST00000555231 RNF123Q5XPI4 1314 aa17.48■□□□□ 0.39
XRCC3-212ENST00000555231 ADAMTSL1Q8N6G6 1762 aa17.48■□□□□ 0.39
XRCC3-212ENST00000555231 EPHX2P34913 555 aa17.48■□□□□ 0.39
XRCC3-212ENST00000555231 IARSP41252 1262 aaKnown RBP17.48■□□□□ 0.39
XRCC3-212ENST00000555231 VEGFBP49765 207 aa17.48■□□□□ 0.39
XRCC3-212ENST00000555231 RTKN2Q8IZC4 609 aa17.48■□□□□ 0.39
XRCC3-212ENST00000555231 TMEM88BA6NKF7 163 aa17.47■□□□□ 0.39
XRCC3-212ENST00000555231 ALDH1B1P30837 517 aa17.47■□□□□ 0.39
XRCC3-212ENST00000555231 TAF7Q15545 349 aaPredicted RBP17.47■□□□□ 0.39
XRCC3-212ENST00000555231 NUTM1Q86Y26 1132 aa17.47■□□□□ 0.39
XRCC3-212ENST00000555231 ABCC12Q96J65 1359 aa17.47■□□□□ 0.39
XRCC3-212ENST00000555231 HTATSF1O43719 755 aaKnown RBP17.46■□□□□ 0.39
XRCC3-212ENST00000555231 MAP1SQ66K74 1059 aaPredicted RBP17.46■□□□□ 0.39
XRCC3-212ENST00000555231 KDM3BQ7LBC6 1761 aa17.45■□□□□ 0.38
XRCC3-212ENST00000555231 FZD9O00144 591 aa17.45■□□□□ 0.38
XRCC3-212ENST00000555231 RGL2O15211 777 aa17.45■□□□□ 0.38
XRCC3-212ENST00000555231 TTLL7Q6ZT98 887 aa17.44■□□□□ 0.38
XRCC3-212ENST00000555231 SLC51AQ86UW1 340 aa17.44■□□□□ 0.38
XRCC3-212ENST00000555231 CNTROBQ8N137 903 aa17.44■□□□□ 0.38
XRCC3-212ENST00000555231 AIDAQ96BJ3 306 aa17.44■□□□□ 0.38
XRCC3-212ENST00000555231 RRP7AQ9Y3A4 280 aaKnown RBP17.44■□□□□ 0.38
XRCC3-212ENST00000555231 GJA3Q9Y6H8 435 aa17.44■□□□□ 0.38
XRCC3-212ENST00000555231 COL4A5P29400 1685 aa17.44■□□□□ 0.38
XRCC3-212ENST00000555231 SNED1Q8TER0 1413 aa17.44■□□□□ 0.38
XRCC3-212ENST00000555231 GPTP24298 496 aa17.43■□□□□ 0.38
XRCC3-212ENST00000555231 LTBP1Q14766 1721 aa17.43■□□□□ 0.38
XRCC3-212ENST00000555231 TCERG1O14776 1098 aaKnown RBP17.42■□□□□ 0.38
XRCC3-212ENST00000555231 MYL6BP14649 208 aa17.42■□□□□ 0.38
XRCC3-212ENST00000555231 CTCFP49711 727 aaPredicted RBP17.42■□□□□ 0.38
XRCC3-212ENST00000555231 PNMA8AQ86V59 439 aaPredicted RBP17.42■□□□□ 0.38
XRCC3-212ENST00000555231 GPC2Q8N158 579 aa17.42■□□□□ 0.38
XRCC3-212ENST00000555231 JDP2Q8WYK2 163 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms