RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 BCORQ6W2J9 1755 aa13.7□□□□□ -0.22
TDP1-211ENST00000555178 PDE3AQ14432 1141 aa13.7□□□□□ -0.22
TDP1-211ENST00000555178 SRP68Q9UHB9 627 aaKnown RBP13.7□□□□□ -0.22
TDP1-211ENST00000555178 MAP3K2Q9Y2U5 619 aa13.7□□□□□ -0.22
TDP1-211ENST00000555178 ERBB4Q15303 1308 aa13.7□□□□□ -0.22
TDP1-211ENST00000555178 SLC4A10Q6U841 1118 aa13.7□□□□□ -0.22
TDP1-211ENST00000555178 AKT1S1Q96B36 256 aa13.7□□□□□ -0.22
TDP1-211ENST00000555178 ABCC4O15439 1325 aa13.69□□□□□ -0.22
TDP1-211ENST00000555178 IPO8O15397 1037 aaKnown RBP13.69□□□□□ -0.22
TDP1-211ENST00000555178 IL6STP40189 918 aaPredicted RBP13.69□□□□□ -0.22
TDP1-211ENST00000555178 PDGFDQ9GZP0 370 aaPredicted RBP13.69□□□□□ -0.22
TDP1-211ENST00000555178 COL15A1P39059 1388 aa13.69□□□□□ -0.22
TDP1-211ENST00000555178 ANKRD36CQ5JPF3 1778 aa13.69□□□□□ -0.22
TDP1-211ENST00000555178 RPS6KA4O75676 772 aa13.68□□□□□ -0.22
TDP1-211ENST00000555178 RC3H1Q5TC82 1133 aaKnown RBP13.68□□□□□ -0.22
TDP1-211ENST00000555178 ARHGAP45Q92619 1136 aa13.68□□□□□ -0.22
TDP1-211ENST00000555178 ATP5J2-PTCD1G3V325 749 aa13.68□□□□□ -0.22
TDP1-211ENST00000555178 BAG6P46379 1132 aa13.68□□□□□ -0.22
TDP1-211ENST00000555178 SF3B2Q13435 895 aaKnown RBP13.68□□□□□ -0.22
TDP1-211ENST00000555178 CWF19L2Q2TBE0 894 aaKnown RBP13.68□□□□□ -0.22
TDP1-211ENST00000555178 KSR2Q6VAB6 950 aa13.68□□□□□ -0.22
TDP1-211ENST00000555178 ANKRD13DQ6ZTN6 518 aa13.68□□□□□ -0.22
TDP1-211ENST00000555178 ITPRIPQ8IWB1 547 aa13.68□□□□□ -0.22
TDP1-211ENST00000555178 ARHGEF1Q92888 912 aaKnown RBP13.68□□□□□ -0.22
TDP1-211ENST00000555178 BCL2L12Q9HB09 334 aa13.68□□□□□ -0.22
TDP1-211ENST00000555178 PTPRCP08575 1304 aa13.68□□□□□ -0.22
TDP1-211ENST00000555178 IGKV5-2P06315 115 aa13.67□□□□□ -0.22
TDP1-211ENST00000555178 DZIP3Q86Y13 1208 aaKnown RBP13.67□□□□□ -0.22
TDP1-211ENST00000555178 JARID2Q92833 1246 aaPredicted RBP13.67□□□□□ -0.22
TDP1-211ENST00000555178 AK7Q96M32 723 aa13.67□□□□□ -0.22
TDP1-211ENST00000555178 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.67□□□□□ -0.22
TDP1-211ENST00000555178 MVPQ14764 893 aaKnown RBP13.67□□□□□ -0.22
TDP1-211ENST00000555178 RIC3Q7Z5B4 369 aa13.67□□□□□ -0.22
TDP1-211ENST00000555178 DNAAF4Q8WXU2 420 aa13.67□□□□□ -0.22
TDP1-211ENST00000555178 API5Q9BZZ5 524 aaKnown RBP13.67□□□□□ -0.22
TDP1-211ENST00000555178 SCN7AQ01118 1682 aa13.67□□□□□ -0.22
TDP1-211ENST00000555178 CAMTA2O94983 1202 aa13.66□□□□□ -0.22
TDP1-211ENST00000555178 BEND3Q5T5X7 828 aa13.66□□□□□ -0.22
TDP1-211ENST00000555178 MYD88Q99836 296 aa13.66□□□□□ -0.22
TDP1-211ENST00000555178 B4GALNT3Q6L9W6 998 aa13.66□□□□□ -0.22
TDP1-211ENST00000555178 PLBD2Q8NHP8 589 aa13.66□□□□□ -0.22
TDP1-211ENST00000555178 RTCBQ9Y3I0 505 aaKnown RBP13.66□□□□□ -0.22
TDP1-211ENST00000555178 MAP3K15Q6ZN16 1313 aa13.65□□□□□ -0.22
TDP1-211ENST00000555178 USPL1Q5W0Q7 1092 aa13.65□□□□□ -0.22
TDP1-211ENST00000555178 COL23A1Q86Y22 540 aaPredicted RBP13.65□□□□□ -0.22
TDP1-211ENST00000555178 GPTP24298 496 aa13.64□□□□□ -0.23
TDP1-211ENST00000555178 PNPLA7Q6ZV29 1317 aa13.64□□□□□ -0.23
TDP1-211ENST00000555178 INTS3Q68E01 1043 aaKnown RBP13.64□□□□□ -0.23
TDP1-211ENST00000555178 SYNE4Q8N205 404 aa13.64□□□□□ -0.23
TDP1-211ENST00000555178 METTL22Q9BUU2 404 aaPredicted RBP13.64□□□□□ -0.23
TDP1-211ENST00000555178 TFCP2L1Q9NZI6 479 aa13.64□□□□□ -0.23
TDP1-211ENST00000555178 MEIS3Q99687 375 aa13.63□□□□□ -0.23
TDP1-211ENST00000555178 UBN2Q6ZU65 1347 aa13.63□□□□□ -0.23
TDP1-211ENST00000555178 SLC15A2Q16348 729 aa13.63□□□□□ -0.23
TDP1-211ENST00000555178 TRAPPC3LQ5T215 181 aa13.63□□□□□ -0.23
TDP1-211ENST00000555178 GIGYF2Q6Y7W6 1299 aaKnown RBP13.63□□□□□ -0.23
TDP1-211ENST00000555178 CCDC125Q86Z20 511 aa13.63□□□□□ -0.23
TDP1-211ENST00000555178 CHMP4AQ9BY43 222 aa13.63□□□□□ -0.23
TDP1-211ENST00000555178 C1orf115Q9H7X2 142 aa13.63□□□□□ -0.23
TDP1-211ENST00000555178 QSER1Q2KHR3 1735 aa13.63□□□□□ -0.23
TDP1-211ENST00000555178 CASZ1Q86V15 1759 aa13.62□□□□□ -0.23
TDP1-211ENST00000555178 MS4A1P11836 297 aa13.62□□□□□ -0.23
TDP1-211ENST00000555178 RTL5Q5HYW3 569 aaPredicted RBP13.62□□□□□ -0.23
TDP1-211ENST00000555178 KIF6Q6ZMV9 814 aa13.62□□□□□ -0.23
TDP1-211ENST00000555178 PPP4R2Q9NY27 417 aa13.62□□□□□ -0.23
TDP1-211ENST00000555178 NEURL1BA8MQ27 555 aa13.62□□□□□ -0.23
TDP1-211ENST00000555178 ZBTB7BO15156 539 aaPredicted RBP13.62□□□□□ -0.23
TDP1-211ENST00000555178 DDX58O95786 925 aaKnown RBP13.62□□□□□ -0.23
TDP1-211ENST00000555178 ERICH6BQ5W0A0 696 aa13.62□□□□□ -0.23
TDP1-211ENST00000555178 TBC1D9BQ66K14 1250 aa13.62□□□□□ -0.23
TDP1-211ENST00000555178 USP44Q9H0E7 712 aa13.62□□□□□ -0.23
TDP1-211ENST00000555178 NARFQ9UHQ1 456 aa13.62□□□□□ -0.23
TDP1-211ENST00000555178 USP42Q9H9J4 1324 aaKnown RBP13.61□□□□□ -0.23
TDP1-211ENST00000555178 PXDNLA1KZ92 1463 aa13.61□□□□□ -0.23
TDP1-211ENST00000555178 FAM177BA6PVY3 158 aa13.61□□□□□ -0.23
TDP1-211ENST00000555178 NBPF7P0C2Y1 421 aaPredicted RBP13.61□□□□□ -0.23
TDP1-211ENST00000555178 TCIRG1Q13488 830 aa13.61□□□□□ -0.23
TDP1-211ENST00000555178 BICDL1Q6ZP65 573 aa13.61□□□□□ -0.23
TDP1-211ENST00000555178 ISCA1Q9BUE6 129 aa13.61□□□□□ -0.23
TDP1-211ENST00000555178 ATP10DQ9P241 1426 aa13.61□□□□□ -0.23
TDP1-211ENST00000555178 GYS1P13807 737 aa13.6□□□□□ -0.23
TDP1-211ENST00000555178 SRCIN1Q9C0H9 1055 aa13.6□□□□□ -0.23
TDP1-211ENST00000555178 DDX19BQ9UMR2 479 aa13.6□□□□□ -0.23
TDP1-211ENST00000555178 SSFA2P28290 1259 aa13.6□□□□□ -0.23
TDP1-211ENST00000555178 RFC4P35249 363 aa13.6□□□□□ -0.23
TDP1-211ENST00000555178 ERVV-1B6SEH8 477 aa13.59□□□□□ -0.23
TDP1-211ENST00000555178 MSH5O43196 834 aa13.59□□□□□ -0.23
TDP1-211ENST00000555178 MSL1Q68DK7 614 aa13.59□□□□□ -0.23
TDP1-211ENST00000555178 ZNF34Q8IZ26 560 aa13.59□□□□□ -0.23
TDP1-211ENST00000555178 CCDC24Q8N4L8 307 aa13.59□□□□□ -0.23
TDP1-211ENST00000555178 LINS1Q8NG48 757 aa13.59□□□□□ -0.23
TDP1-211ENST00000555178 ZBTB40Q9NUA8 1239 aa13.59□□□□□ -0.23
TDP1-211ENST00000555178 PCDHB15Q9Y5E8 787 aa13.59□□□□□ -0.23
TDP1-211ENST00000555178 GCKRQ14397 625 aa13.59□□□□□ -0.23
TDP1-211ENST00000555178 SUSD4Q5VX71 490 aa13.59□□□□□ -0.23
TDP1-211ENST00000555178 NLRP10Q86W26 655 aa13.59□□□□□ -0.23
TDP1-211ENST00000555178 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
TDP1-211ENST00000555178 STK32BQ9NY57 414 aa13.59□□□□□ -0.23
TDP1-211ENST00000555178 TAF1P21675 1872 aa13.58□□□□□ -0.23
TDP1-211ENST00000555178 COL24A1Q17RW2 1714 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms