RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 SNRPA1P09661 255 aaKnown RBP20.66■□□□□ 0.9
NEDD1-207ENST00000555114 CLEC4GQ6UXB4 293 aa20.66■□□□□ 0.9
NEDD1-207ENST00000555114 ANKRD31Q8N7Z5 1873 aa20.66■□□□□ 0.9
NEDD1-207ENST00000555114 KCNQ3O43525 872 aa20.65■□□□□ 0.9
NEDD1-207ENST00000555114 NBPF5PQ86XG9 351 aaPredicted RBP20.65■□□□□ 0.9
NEDD1-207ENST00000555114 SRGNP10124 158 aa20.64■□□□□ 0.89
NEDD1-207ENST00000555114 PRPF40BQ6NWY9 871 aaKnown RBP20.64■□□□□ 0.89
NEDD1-207ENST00000555114 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
NEDD1-207ENST00000555114 CCDC88AQ3V6T2 1871 aa20.63■□□□□ 0.89
NEDD1-207ENST00000555114 HTATSF1O43719 755 aaKnown RBP20.63■□□□□ 0.89
NEDD1-207ENST00000555114 COL11A2P13942 1736 aaPredicted RBP20.62■□□□□ 0.89
NEDD1-207ENST00000555114 RGL2O15211 777 aa20.62■□□□□ 0.89
NEDD1-207ENST00000555114 NEFMP07197 916 aa20.62■□□□□ 0.89
NEDD1-207ENST00000555114 MCM10Q7L590 875 aa20.62■□□□□ 0.89
NEDD1-207ENST00000555114 BCORQ6W2J9 1755 aa20.62■□□□□ 0.89
NEDD1-207ENST00000555114 PPP2R1AP30153 589 aa20.61■□□□□ 0.89
NEDD1-207ENST00000555114 TPTE2Q6XPS3 522 aa20.61■□□□□ 0.89
NEDD1-207ENST00000555114 FER1L6Q2WGJ9 1857 aa20.6■□□□□ 0.89
NEDD1-207ENST00000555114 NPR1P16066 1061 aa20.6■□□□□ 0.89
NEDD1-207ENST00000555114 PIP4K2AP48426 406 aaPredicted RBP20.6■□□□□ 0.89
NEDD1-207ENST00000555114 CCDC93Q567U6 631 aa20.6■□□□□ 0.89
NEDD1-207ENST00000555114 IQCA1LA6NCM1 817 aa20.59■□□□□ 0.89
NEDD1-207ENST00000555114 POTECB2RU33 542 aa20.59■□□□□ 0.89
NEDD1-207ENST00000555114 NIP7Q9Y221 180 aaKnown RBP eCLIP20.59■□□□□ 0.89
NEDD1-207ENST00000555114 DICER1Q9UPY3 1922 aaKnown RBP20.59■□□□□ 0.89
NEDD1-207ENST00000555114 PRAMEF22A3QJZ6 481 aa20.58■□□□□ 0.89
NEDD1-207ENST00000555114 CHADLQ6NUI6 762 aa20.58■□□□□ 0.89
NEDD1-207ENST00000555114 GTF2E1P29083 439 aaPredicted RBP20.57■□□□□ 0.88
NEDD1-207ENST00000555114 TAF7Q15545 349 aaPredicted RBP20.57■□□□□ 0.88
NEDD1-207ENST00000555114 SLX4Q8IY92 1834 aa20.56■□□□□ 0.88
NEDD1-207ENST00000555114 DDNO94850 711 aaPredicted RBP20.56■□□□□ 0.88
NEDD1-207ENST00000555114 DCTN1Q14203 1278 aa20.56■□□□□ 0.88
NEDD1-207ENST00000555114 COL13A1Q5TAT6 717 aaPredicted RBP20.56■□□□□ 0.88
NEDD1-207ENST00000555114 PNISRQ8TF01 805 aaKnown RBP20.56■□□□□ 0.88
NEDD1-207ENST00000555114 ARFGEF2Q9Y6D5 1785 aa20.56■□□□□ 0.88
NEDD1-207ENST00000555114 RTKN2Q8IZC4 609 aa20.55■□□□□ 0.88
NEDD1-207ENST00000555114 KLRG2A4D1S0 409 aaPredicted RBP20.54■□□□□ 0.88
NEDD1-207ENST00000555114 HSPA1AP0DMV8 641 aaKnown RBP20.54■□□□□ 0.88
NEDD1-207ENST00000555114 HSPA1BP0DMV9 641 aaKnown RBP20.54■□□□□ 0.88
NEDD1-207ENST00000555114 ALDH1B1P30837 517 aa20.54■□□□□ 0.88
NEDD1-207ENST00000555114 FKBP4Q02790 459 aaKnown RBP eCLIP20.54■□□□□ 0.88
NEDD1-207ENST00000555114 TNS4Q8IZW8 715 aa20.54■□□□□ 0.88
NEDD1-207ENST00000555114 CREBZFQ9NS37 354 aa20.54■□□□□ 0.88
NEDD1-207ENST00000555114 CACNA1SQ13698 1873 aa20.54■□□□□ 0.88
NEDD1-207ENST00000555114 FAM177BA6PVY3 158 aa20.53■□□□□ 0.88
NEDD1-207ENST00000555114 NBPF26B4DH59 902 aa20.53■□□□□ 0.88
NEDD1-207ENST00000555114 NBPF10Q6P3W6 841 aaKnown RBP20.53■□□□□ 0.88
NEDD1-207ENST00000555114 NBPF15Q8N660 670 aa20.53■□□□□ 0.88
NEDD1-207ENST00000555114 C7orf43Q8WVR3 580 aa20.53■□□□□ 0.88
NEDD1-207ENST00000555114 NYXQ9GZU5 481 aa20.53■□□□□ 0.88
NEDD1-207ENST00000555114 LDHDQ86WU2 507 aa20.52■□□□□ 0.88
NEDD1-207ENST00000555114 L3MBTL3Q96JM7 780 aaPredicted RBP20.52■□□□□ 0.88
NEDD1-207ENST00000555114 KIF6Q6ZMV9 814 aa20.5■□□□□ 0.87
NEDD1-207ENST00000555114 PNNQ9H307 717 aaKnown RBP20.5■□□□□ 0.87
NEDD1-207ENST00000555114 ERVV-1B6SEH8 477 aa20.49■□□□□ 0.87
NEDD1-207ENST00000555114 HLFQ16534 295 aa20.49■□□□□ 0.87
NEDD1-207ENST00000555114 TAF1DQ9H5J8 278 aaPredicted RBP20.49■□□□□ 0.87
NEDD1-207ENST00000555114 ZNF277Q9NRM2 450 aaPredicted RBP20.49■□□□□ 0.87
NEDD1-207ENST00000555114 MIS18AQ9NYP9 233 aa20.49■□□□□ 0.87
NEDD1-207ENST00000555114 NGEFQ8N5V2 710 aa20.48■□□□□ 0.87
NEDD1-207ENST00000555114 HACL1Q9UJ83 578 aa20.48■□□□□ 0.87
NEDD1-207ENST00000555114 LAMB4A4D0S4 1761 aa20.47■□□□□ 0.87
NEDD1-207ENST00000555114 POTEIP0CG38 1075 aa20.47■□□□□ 0.87
NEDD1-207ENST00000555114 POTEJP0CG39 1038 aa20.47■□□□□ 0.87
NEDD1-207ENST00000555114 IARSP41252 1262 aaKnown RBP20.47■□□□□ 0.87
NEDD1-207ENST00000555114 EAPPQ56P03 285 aaPredicted RBP20.47■□□□□ 0.87
NEDD1-207ENST00000555114 CC2D2BQ6DHV5 1058 aa20.47■□□□□ 0.87
NEDD1-207ENST00000555114 MKRN1Q9UHC7 482 aaKnown RBP20.47■□□□□ 0.87
NEDD1-207ENST00000555114 SCN4AP35499 1836 aa20.47■□□□□ 0.87
NEDD1-207ENST00000555114 MAP3K15Q6ZN16 1313 aa20.47■□□□□ 0.87
NEDD1-207ENST00000555114 GRIPAP1Q4V328 841 aa20.46■□□□□ 0.87
NEDD1-207ENST00000555114 JDP2Q8WYK2 163 aa20.46■□□□□ 0.87
NEDD1-207ENST00000555114 RPGRQ92834 1020 aaKnown RBP20.46■□□□□ 0.87
NEDD1-207ENST00000555114 MAPK8IP3Q9UPT6 1336 aa20.46■□□□□ 0.87
NEDD1-207ENST00000555114 CAPN15O75808 1086 aa20.45■□□□□ 0.86
NEDD1-207ENST00000555114 CRY2Q49AN0 593 aa20.45■□□□□ 0.86
NEDD1-207ENST00000555114 PNMA8AQ86V59 439 aaPredicted RBP20.45■□□□□ 0.86
NEDD1-207ENST00000555114 SYNE4Q8N205 404 aa20.45■□□□□ 0.86
NEDD1-207ENST00000555114 PSMD1Q99460 953 aa20.45■□□□□ 0.86
NEDD1-207ENST00000555114 CLEC11AQ9Y240 323 aa20.45■□□□□ 0.86
NEDD1-207ENST00000555114 RRP7AQ9Y3A4 280 aaKnown RBP20.45■□□□□ 0.86
NEDD1-207ENST00000555114 ZNF541Q9H0D2 1346 aa20.45■□□□□ 0.86
NEDD1-207ENST00000555114 EPHX2P34913 555 aa20.44■□□□□ 0.86
NEDD1-207ENST00000555114 EIF4A1P60842 406 aaKnown RBP20.44■□□□□ 0.86
NEDD1-207ENST00000555114 NFE2L2Q16236 605 aa20.44■□□□□ 0.86
NEDD1-207ENST00000555114 OLFM4Q6UX06 510 aa20.44■□□□□ 0.86
NEDD1-207ENST00000555114 PASKQ96RG2 1323 aa20.44■□□□□ 0.86
NEDD1-207ENST00000555114 IBTKQ9P2D0 1353 aaPredicted RBP20.44■□□□□ 0.86
NEDD1-207ENST00000555114 TMEM88BA6NKF7 163 aa20.43■□□□□ 0.86
NEDD1-207ENST00000555114 FZD9O00144 591 aa20.43■□□□□ 0.86
NEDD1-207ENST00000555114 MYL6BP14649 208 aa20.43■□□□□ 0.86
NEDD1-207ENST00000555114 NUTM1Q86Y26 1132 aa20.43■□□□□ 0.86
NEDD1-207ENST00000555114 GPC2Q8N158 579 aa20.43■□□□□ 0.86
NEDD1-207ENST00000555114 ERBB4Q15303 1308 aa20.43■□□□□ 0.86
NEDD1-207ENST00000555114 CNTNAP1P78357 1384 aa20.43■□□□□ 0.86
NEDD1-207ENST00000555114 EIF6P56537 245 aaKnown RBP20.42■□□□□ 0.86
NEDD1-207ENST00000555114 TMX4Q9H1E5 349 aaPredicted RBP20.42■□□□□ 0.86
NEDD1-207ENST00000555114 ABCC12Q96J65 1359 aa20.42■□□□□ 0.86
NEDD1-207ENST00000555114 KDM3BQ7LBC6 1761 aa20.41■□□□□ 0.86
NEDD1-207ENST00000555114 AIDAQ96BJ3 306 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms