RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 ARHGAP45Q92619 1136 aa20.98■□□□□ 0.95
SPTLC2-203ENST00000554901 IPO8O15397 1037 aaKnown RBP20.97■□□□□ 0.95
SPTLC2-203ENST00000554901 CLEC4GQ6UXB4 293 aa20.97■□□□□ 0.95
SPTLC2-203ENST00000554901 TBC1D2BQ9UPU7 963 aa20.97■□□□□ 0.95
SPTLC2-203ENST00000554901 ZNF652Q9Y2D9 606 aa20.97■□□□□ 0.95
SPTLC2-203ENST00000554901 C4AP0C0L4 1744 aa20.96■□□□□ 0.95
SPTLC2-203ENST00000554901 BCAR3O75815 825 aa20.96■□□□□ 0.95
SPTLC2-203ENST00000554901 CAMTA2O94983 1202 aa20.96■□□□□ 0.95
SPTLC2-203ENST00000554901 FKBP5Q13451 457 aaPredicted RBP20.96■□□□□ 0.95
SPTLC2-203ENST00000554901 ARXQ96QS3 562 aa20.96■□□□□ 0.95
SPTLC2-203ENST00000554901 KSR2Q6VAB6 950 aa20.95■□□□□ 0.94
SPTLC2-203ENST00000554901 SMIM5Q71RC9 77 aa20.95■□□□□ 0.94
SPTLC2-203ENST00000554901 R3HDM1Q15032 1099 aaKnown RBP20.94■□□□□ 0.94
SPTLC2-203ENST00000554901 RIC3Q7Z5B4 369 aa20.94■□□□□ 0.94
SPTLC2-203ENST00000554901 SCN7AQ01118 1682 aa20.94■□□□□ 0.94
SPTLC2-203ENST00000554901 MSH5O43196 834 aa20.94■□□□□ 0.94
SPTLC2-203ENST00000554901 HSP90AB3PQ58FF7 597 aa20.94■□□□□ 0.94
SPTLC2-203ENST00000554901 GIGYF2Q6Y7W6 1299 aaKnown RBP20.94■□□□□ 0.94
SPTLC2-203ENST00000554901 API5Q9BZZ5 524 aaKnown RBP20.94■□□□□ 0.94
SPTLC2-203ENST00000554901 NOB1Q9ULX3 412 aaKnown RBP20.94■□□□□ 0.94
SPTLC2-203ENST00000554901 PI4KAP2A4QPH2 592 aa20.93■□□□□ 0.94
SPTLC2-203ENST00000554901 CENPBP07199 599 aaPredicted RBP20.93■□□□□ 0.94
SPTLC2-203ENST00000554901 GYS1P13807 737 aa20.93■□□□□ 0.94
SPTLC2-203ENST00000554901 USPL1Q5W0Q7 1092 aa20.93■□□□□ 0.94
SPTLC2-203ENST00000554901 NLGN1Q8N2Q7 840 aa20.93■□□□□ 0.94
SPTLC2-203ENST00000554901 PI4KAP1Q8N8J0 262 aa20.93■□□□□ 0.94
SPTLC2-203ENST00000554901 ZBTB3Q9H5J0 574 aa20.93■□□□□ 0.94
SPTLC2-203ENST00000554901 BCORQ6W2J9 1755 aa20.92■□□□□ 0.94
SPTLC2-203ENST00000554901 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.92■□□□□ 0.94
SPTLC2-203ENST00000554901 SRP68Q9UHB9 627 aaKnown RBP20.92■□□□□ 0.94
SPTLC2-203ENST00000554901 ADCY9O60503 1353 aa20.92■□□□□ 0.94
SPTLC2-203ENST00000554901 ZKSCAN2Q63HK3 967 aa20.91■□□□□ 0.94
SPTLC2-203ENST00000554901 DNAAF4Q8WXU2 420 aa20.91■□□□□ 0.94
SPTLC2-203ENST00000554901 BCL2L12Q9HB09 334 aa20.91■□□□□ 0.94
SPTLC2-203ENST00000554901 ATP10DQ9P241 1426 aa20.91■□□□□ 0.94
SPTLC2-203ENST00000554901 ATF7IPQ6VMQ6 1270 aa20.9■□□□□ 0.94
SPTLC2-203ENST00000554901 METTL22Q9BUU2 404 aaPredicted RBP20.9■□□□□ 0.94
SPTLC2-203ENST00000554901 MAP3K2Q9Y2U5 619 aa20.9■□□□□ 0.94
SPTLC2-203ENST00000554901 NEXNQ0ZGT2 675 aa20.89■□□□□ 0.94
SPTLC2-203ENST00000554901 TCIRG1Q13488 830 aa20.89■□□□□ 0.94
SPTLC2-203ENST00000554901 HLFQ16534 295 aa20.89■□□□□ 0.94
SPTLC2-203ENST00000554901 CASZ1Q86V15 1759 aa20.89■□□□□ 0.94
SPTLC2-203ENST00000554901 FRAT1Q92837 279 aaPredicted RBP20.89■□□□□ 0.94
SPTLC2-203ENST00000554901 MS4A1P11836 297 aa20.88■□□□□ 0.93
SPTLC2-203ENST00000554901 TRIM28Q13263 835 aaKnown RBP20.88■□□□□ 0.93
SPTLC2-203ENST00000554901 PXDNLA1KZ92 1463 aa20.88■□□□□ 0.93
SPTLC2-203ENST00000554901 FKBP8Q14318 412 aa20.88■□□□□ 0.93
SPTLC2-203ENST00000554901 MTFR1LQ9H019 292 aa20.88■□□□□ 0.93
SPTLC2-203ENST00000554901 ARFGEF2Q9Y6D5 1785 aa20.88■□□□□ 0.93
SPTLC2-203ENST00000554901 IBTKQ9P2D0 1353 aaPredicted RBP20.87■□□□□ 0.93
SPTLC2-203ENST00000554901 PSDA5PKW4 1024 aaPredicted RBP20.87■□□□□ 0.93
SPTLC2-203ENST00000554901 TRIM27P14373 513 aa20.87■□□□□ 0.93
SPTLC2-203ENST00000554901 ZNF34Q8IZ26 560 aa20.87■□□□□ 0.93
SPTLC2-203ENST00000554901 PDGFDQ9GZP0 370 aaPredicted RBP20.87■□□□□ 0.93
SPTLC2-203ENST00000554901 PARP10Q53GL7 1025 aa20.86■□□□□ 0.93
SPTLC2-203ENST00000554901 LINS1Q8NG48 757 aa20.86■□□□□ 0.93
SPTLC2-203ENST00000554901 ISCA1Q9BUE6 129 aa20.86■□□□□ 0.93
SPTLC2-203ENST00000554901 NUP98P52948 1817 aa20.86■□□□□ 0.93
SPTLC2-203ENST00000554901 ABCC4O15439 1325 aa20.85■□□□□ 0.93
SPTLC2-203ENST00000554901 F6X3S4 739 aa20.85■□□□□ 0.93
SPTLC2-203ENST00000554901 TM4SF1P30408 202 aa20.85■□□□□ 0.93
SPTLC2-203ENST00000554901 SETDB2Q96T68 719 aa20.85■□□□□ 0.93
SPTLC2-203ENST00000554901 NIP7Q9Y221 180 aaKnown RBP eCLIP20.85■□□□□ 0.93
SPTLC2-203ENST00000554901 RNF123Q5XPI4 1314 aa20.85■□□□□ 0.93
SPTLC2-203ENST00000554901 TBC1D9BQ66K14 1250 aa20.84■□□□□ 0.93
SPTLC2-203ENST00000554901 CCDC191Q8NCU4 936 aa20.84■□□□□ 0.93
SPTLC2-203ENST00000554901 MYD88Q99836 296 aa20.84■□□□□ 0.93
SPTLC2-203ENST00000554901 ALDH1L1O75891 902 aa20.83■□□□□ 0.93
SPTLC2-203ENST00000554901 CCT4P50991 539 aaKnown RBP20.83■□□□□ 0.93
SPTLC2-203ENST00000554901 NFIXQ14938 502 aa20.83■□□□□ 0.93
SPTLC2-203ENST00000554901 BEND3Q5T5X7 828 aa20.83■□□□□ 0.93
SPTLC2-203ENST00000554901 CARMIL3Q8ND23 1372 aa20.83■□□□□ 0.93
SPTLC2-203ENST00000554901 ANKRD36CQ5JPF3 1778 aa20.83■□□□□ 0.92
SPTLC2-203ENST00000554901 RRP1P56182 461 aaKnown RBP20.83■□□□□ 0.92
SPTLC2-203ENST00000554901 PDE3AQ14432 1141 aa20.83■□□□□ 0.92
SPTLC2-203ENST00000554901 SLC4A10Q6U841 1118 aa20.83■□□□□ 0.92
SPTLC2-203ENST00000554901 FTSJ3Q8IY81 847 aaKnown RBP20.83■□□□□ 0.92
SPTLC2-203ENST00000554901 DZIP1LQ8IYY4 767 aaKnown RBP20.83■□□□□ 0.92
SPTLC2-203ENST00000554901 SRCIN1Q9C0H9 1055 aa20.83■□□□□ 0.92
SPTLC2-203ENST00000554901 IGKV5-2P06315 115 aa20.82■□□□□ 0.92
SPTLC2-203ENST00000554901 INTS3Q68E01 1043 aaKnown RBP20.82■□□□□ 0.92
SPTLC2-203ENST00000554901 NLRP10Q86W26 655 aa20.82■□□□□ 0.92
SPTLC2-203ENST00000554901 COL24A1Q17RW2 1714 aa20.81■□□□□ 0.92
SPTLC2-203ENST00000554901 NEURL1BA8MQ27 555 aa20.81■□□□□ 0.92
SPTLC2-203ENST00000554901 GPTP24298 496 aa20.81■□□□□ 0.92
SPTLC2-203ENST00000554901 PPP1R42Q7Z4L9 355 aa20.81■□□□□ 0.92
SPTLC2-203ENST00000554901 UBN2Q6ZU65 1347 aa20.8■□□□□ 0.92
SPTLC2-203ENST00000554901 ATP5J2-PTCD1G3V325 749 aa20.8■□□□□ 0.92
SPTLC2-203ENST00000554901 ZBTB7AO95365 584 aa20.8■□□□□ 0.92
SPTLC2-203ENST00000554901 MMP10P09238 476 aa20.8■□□□□ 0.92
SPTLC2-203ENST00000554901 MSL1Q68DK7 614 aa20.8■□□□□ 0.92
SPTLC2-203ENST00000554901 NYXQ9GZU5 481 aa20.8■□□□□ 0.92
SPTLC2-203ENST00000554901 CWC25Q9NXE8 425 aaPredicted RBP20.8■□□□□ 0.92
SPTLC2-203ENST00000554901 POLRMTO00411 1230 aaKnown RBP20.79■□□□□ 0.92
SPTLC2-203ENST00000554901 POLD1P28340 1107 aa20.79■□□□□ 0.92
SPTLC2-203ENST00000554901 BICDL1Q6ZP65 573 aa20.79■□□□□ 0.92
SPTLC2-203ENST00000554901 CLUAP1Q96AJ1 413 aa20.79■□□□□ 0.92
SPTLC2-203ENST00000554901 PARP3Q9Y6F1 533 aa20.79■□□□□ 0.92
SPTLC2-203ENST00000554901 N4BP2Q86UW6 1770 aaPredicted RBP20.79■□□□□ 0.92
SPTLC2-203ENST00000554901 PLIN1O60240 522 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms