RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 DICER1Q9UPY3 1922 aaKnown RBP24.28■■□□□ 1.48
PRKCH-210ENST00000554835 VEGFAP15692 232 aaPredicted RBP24.28■■□□□ 1.48
PRKCH-210ENST00000554835 NBPF26B4DH59 902 aa24.27■■□□□ 1.48
PRKCH-210ENST00000554835 SNRPA1P09661 255 aaKnown RBP24.27■■□□□ 1.48
PRKCH-210ENST00000554835 SRGNP10124 158 aa24.27■■□□□ 1.48
PRKCH-210ENST00000554835 NBPF10Q6P3W6 841 aaKnown RBP24.27■■□□□ 1.48
PRKCH-210ENST00000554835 NBPF15Q8N660 670 aa24.27■■□□□ 1.48
PRKCH-210ENST00000554835 RTF1Q92541 710 aaKnown RBP24.27■■□□□ 1.48
PRKCH-210ENST00000554835 CACNA1SQ13698 1873 aa24.27■■□□□ 1.48
PRKCH-210ENST00000554835 NPM2Q86SE8 214 aaKnown RBP24.26■■□□□ 1.47
PRKCH-210ENST00000554835 JMYQ8N9B5 988 aa24.25■■□□□ 1.47
PRKCH-210ENST00000554835 ARFGEF2Q9Y6D5 1785 aa24.24■■□□□ 1.47
PRKCH-210ENST00000554835 HTATSF1O43719 755 aaKnown RBP24.24■■□□□ 1.47
PRKCH-210ENST00000554835 ST5P78524 1137 aa24.24■■□□□ 1.47
PRKCH-210ENST00000554835 STYK1Q6J9G0 422 aa24.24■■□□□ 1.47
PRKCH-210ENST00000554835 PRPF40BQ6NWY9 871 aaKnown RBP24.24■■□□□ 1.47
PRKCH-210ENST00000554835 CLEC4GQ6UXB4 293 aa24.24■■□□□ 1.47
PRKCH-210ENST00000554835 ERFEQ4G0M1 354 aa24.23■■□□□ 1.47
PRKCH-210ENST00000554835 CNKSR1Q969H4 720 aa24.23■■□□□ 1.47
PRKCH-210ENST00000554835 MIS18AQ9NYP9 233 aa24.23■■□□□ 1.47
PRKCH-210ENST00000554835 LTBP3Q9NS15 1303 aa24.23■■□□□ 1.47
PRKCH-210ENST00000554835 NPHP1O15259 732 aa24.22■■□□□ 1.47
PRKCH-210ENST00000554835 MASTLQ96GX5 879 aa24.22■■□□□ 1.47
PRKCH-210ENST00000554835 TAF7Q15545 349 aaPredicted RBP24.21■■□□□ 1.47
PRKCH-210ENST00000554835 NBPF5PQ86XG9 351 aaPredicted RBP24.21■■□□□ 1.47
PRKCH-210ENST00000554835 C7orf43Q8WVR3 580 aa24.21■■□□□ 1.47
PRKCH-210ENST00000554835 TAOK3Q9H2K8 898 aa24.21■■□□□ 1.47
PRKCH-210ENST00000554835 DLG5Q8TDM6 1919 aa24.21■■□□□ 1.47
PRKCH-210ENST00000554835 DPY19L2Q6NUT2 758 aa24.2■■□□□ 1.46
PRKCH-210ENST00000554835 KLRG2A4D1S0 409 aaPredicted RBP24.19■■□□□ 1.46
PRKCH-210ENST00000554835 HLFQ16534 295 aa24.19■■□□□ 1.46
PRKCH-210ENST00000554835 NIP7Q9Y221 180 aaKnown RBP eCLIP24.18■■□□□ 1.46
PRKCH-210ENST00000554835 ZNF652Q9Y2D9 606 aa24.18■■□□□ 1.46
PRKCH-210ENST00000554835 LAMB4A4D0S4 1761 aa24.17■■□□□ 1.46
PRKCH-210ENST00000554835 PLEKHF1Q96S99 279 aa24.17■■□□□ 1.46
PRKCH-210ENST00000554835 KDM3BQ7LBC6 1761 aa24.16■■□□□ 1.46
PRKCH-210ENST00000554835 RGL2O15211 777 aa24.16■■□□□ 1.46
PRKCH-210ENST00000554835 DDNO94850 711 aaPredicted RBP24.16■■□□□ 1.46
PRKCH-210ENST00000554835 OLFM4Q6UX06 510 aa24.16■■□□□ 1.46
PRKCH-210ENST00000554835 FAM177BA6PVY3 158 aa24.15■■□□□ 1.46
PRKCH-210ENST00000554835 NPR1P16066 1061 aa24.15■■□□□ 1.46
PRKCH-210ENST00000554835 SOGA3Q5TF21 947 aa24.15■■□□□ 1.46
PRKCH-210ENST00000554835 TPTE2Q6XPS3 522 aa24.15■■□□□ 1.46
PRKCH-210ENST00000554835 POTEIP0CG38 1075 aa24.14■■□□□ 1.45
PRKCH-210ENST00000554835 POTEJP0CG39 1038 aa24.14■■□□□ 1.45
PRKCH-210ENST00000554835 THUMPD2Q9BTF0 503 aaKnown RBP24.13■■□□□ 1.45
PRKCH-210ENST00000554835 EIF4A1P60842 406 aaKnown RBP24.12■■□□□ 1.45
PRKCH-210ENST00000554835 COL13A1Q5TAT6 717 aaPredicted RBP24.12■■□□□ 1.45
PRKCH-210ENST00000554835 CCDC93Q567U6 631 aa24.11■■□□□ 1.45
PRKCH-210ENST00000554835 NUP98P52948 1817 aa24.1■■□□□ 1.45
PRKCH-210ENST00000554835 NGEFQ8N5V2 710 aa24.1■■□□□ 1.45
PRKCH-210ENST00000554835 ABCC12Q96J65 1359 aa24.09■■□□□ 1.45
PRKCH-210ENST00000554835 NFE2L2Q16236 605 aa24.09■■□□□ 1.45
PRKCH-210ENST00000554835 TTLL7Q6ZT98 887 aa24.09■■□□□ 1.45
PRKCH-210ENST00000554835 ZNF277Q9NRM2 450 aaPredicted RBP24.09■■□□□ 1.45
PRKCH-210ENST00000554835 FKBP4Q02790 459 aaKnown RBP eCLIP24.08■■□□□ 1.45
PRKCH-210ENST00000554835 CHADLQ6NUI6 762 aa24.08■■□□□ 1.45
PRKCH-210ENST00000554835 PNISRQ8TF01 805 aaKnown RBP24.08■■□□□ 1.45
PRKCH-210ENST00000554835 SNED1Q8TER0 1413 aa24.08■■□□□ 1.44
PRKCH-210ENST00000554835 ERVV-1B6SEH8 477 aa24.07■■□□□ 1.44
PRKCH-210ENST00000554835 NUTM1Q86Y26 1132 aa24.07■■□□□ 1.44
PRKCH-210ENST00000554835 L3MBTL3Q96JM7 780 aaPredicted RBP24.07■■□□□ 1.44
PRKCH-210ENST00000554835 RRP7AQ9Y3A4 280 aaKnown RBP24.07■■□□□ 1.44
PRKCH-210ENST00000554835 MAP3K15Q6ZN16 1313 aa24.07■■□□□ 1.44
PRKCH-210ENST00000554835 ZNF541Q9H0D2 1346 aa24.07■■□□□ 1.44
PRKCH-210ENST00000554835 CRY2Q49AN0 593 aa24.06■■□□□ 1.44
PRKCH-210ENST00000554835 SCN4AP35499 1836 aa24.05■■□□□ 1.44
PRKCH-210ENST00000554835 NEFMP07197 916 aa24.05■■□□□ 1.44
PRKCH-210ENST00000554835 UBN2Q6ZU65 1347 aa24.05■■□□□ 1.44
PRKCH-210ENST00000554835 MYL6BP14649 208 aa24.04■■□□□ 1.44
PRKCH-210ENST00000554835 GTF2E1P29083 439 aaPredicted RBP24.04■■□□□ 1.44
PRKCH-210ENST00000554835 ALDH1B1P30837 517 aa24.04■■□□□ 1.44
PRKCH-210ENST00000554835 RTKN2Q8IZC4 609 aa24.04■■□□□ 1.44
PRKCH-210ENST00000554835 TAF1DQ9H5J8 278 aaPredicted RBP24.04■■□□□ 1.44
PRKCH-210ENST00000554835 SLC51AQ86UW1 340 aa24.03■■□□□ 1.44
PRKCH-210ENST00000554835 HSPA1AP0DMV8 641 aaKnown RBP24.02■■□□□ 1.44
PRKCH-210ENST00000554835 HSPA1BP0DMV9 641 aaKnown RBP24.02■■□□□ 1.44
PRKCH-210ENST00000554835 GPTP24298 496 aa24.02■■□□□ 1.44
PRKCH-210ENST00000554835 SYNE4Q8N205 404 aa24.02■■□□□ 1.44
PRKCH-210ENST00000554835 NYXQ9GZU5 481 aa24.02■■□□□ 1.44
PRKCH-210ENST00000554835 ZBTB3Q9H5J0 574 aa24.02■■□□□ 1.44
PRKCH-210ENST00000554835 IQCA1LA6NCM1 817 aa24.01■■□□□ 1.43
PRKCH-210ENST00000554835 FZD9O00144 591 aa24.01■■□□□ 1.43
PRKCH-210ENST00000554835 IARSP41252 1262 aaKnown RBP24.01■■□□□ 1.43
PRKCH-210ENST00000554835 SUSD4Q5VX71 490 aa24.01■■□□□ 1.43
PRKCH-210ENST00000554835 KIF6Q6ZMV9 814 aa24.01■■□□□ 1.43
PRKCH-210ENST00000554835 LRP10Q7Z4F1 713 aa24.01■■□□□ 1.43
PRKCH-210ENST00000554835 ZNF34Q8IZ26 560 aa24.01■■□□□ 1.43
PRKCH-210ENST00000554835 CREBZFQ9NS37 354 aa24.01■■□□□ 1.43
PRKCH-210ENST00000554835 PASKQ96RG2 1323 aa24.01■■□□□ 1.43
PRKCH-210ENST00000554835 COL4A5P29400 1685 aa24.01■■□□□ 1.43
PRKCH-210ENST00000554835 LDHDQ86WU2 507 aa24■■□□□ 1.43
PRKCH-210ENST00000554835 RIC1Q4ADV7 1423 aa24■■□□□ 1.43
PRKCH-210ENST00000554835 ADAMTSL1Q8N6G6 1762 aa23.99■■□□□ 1.43
PRKCH-210ENST00000554835 PDIA6Q15084 440 aa23.99■■□□□ 1.43
PRKCH-210ENST00000554835 C3orf67Q6ZVT6 689 aa23.99■■□□□ 1.43
PRKCH-210ENST00000554835 MAPK8IP3Q9UPT6 1336 aa23.99■■□□□ 1.43
PRKCH-210ENST00000554835 IBTKQ9P2D0 1353 aaPredicted RBP23.99■■□□□ 1.43
PRKCH-210ENST00000554835 HOXA10P31260 410 aaPredicted RBP23.98■■□□□ 1.43
PRKCH-210ENST00000554835 PSMD1Q99460 953 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms