RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 CCDC24Q8N4L8 307 aa13.9□□□□□ -0.18
SHMT2-213ENST00000554600 ANKRD36CQ5JPF3 1778 aa13.89□□□□□ -0.19
SHMT2-213ENST00000554600 GOLGB1Q14789 3259 aaKnown RBP13.89□□□□□ -0.19
SHMT2-213ENST00000554600 CHL1O00533 1208 aa13.89□□□□□ -0.19
SHMT2-213ENST00000554600 CALD1Q05682 793 aaKnown RBP13.89□□□□□ -0.19
SHMT2-213ENST00000554600 PIM2Q9P1W9 311 aa13.89□□□□□ -0.19
SHMT2-213ENST00000554600 COL11A2P13942 1736 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-213ENST00000554600 FAM177BA6PVY3 158 aa13.88□□□□□ -0.19
SHMT2-213ENST00000554600 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
SHMT2-213ENST00000554600 DALRD3Q5D0E6 543 aaKnown RBP13.88□□□□□ -0.19
SHMT2-213ENST00000554600 CLEC4GQ6UXB4 293 aa13.88□□□□□ -0.19
SHMT2-213ENST00000554600 CNBD1Q8NA66 436 aa13.88□□□□□ -0.19
SHMT2-213ENST00000554600 NIP7Q9Y221 180 aaKnown RBP eCLIP13.88□□□□□ -0.19
SHMT2-213ENST00000554600 SBF1O95248 1867 aa13.88□□□□□ -0.19
SHMT2-213ENST00000554600 ANXA1P04083 346 aa13.87□□□□□ -0.19
SHMT2-213ENST00000554600 GNAI1P63096 354 aa13.87□□□□□ -0.19
SHMT2-213ENST00000554600 ST5P78524 1137 aa13.87□□□□□ -0.19
SHMT2-213ENST00000554600 PRR5LQ6MZQ0 368 aa13.87□□□□□ -0.19
SHMT2-213ENST00000554600 TTLL7Q6ZT98 887 aa13.87□□□□□ -0.19
SHMT2-213ENST00000554600 ARHGAP27Q6ZUM4 889 aa13.87□□□□□ -0.19
SHMT2-213ENST00000554600 NBPF5PQ86XG9 351 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-213ENST00000554600 C2CD5Q86YS7 1000 aa13.87□□□□□ -0.19
SHMT2-213ENST00000554600 CFAP44Q96MT7 982 aa13.87□□□□□ -0.19
SHMT2-213ENST00000554600 ZBTB3Q9H5J0 574 aa13.87□□□□□ -0.19
SHMT2-213ENST00000554600 ERBB4Q15303 1308 aa13.87□□□□□ -0.19
SHMT2-213ENST00000554600 H0YIN7 160 aa13.86□□□□□ -0.19
SHMT2-213ENST00000554600 KCNA3P22001 575 aa13.86□□□□□ -0.19
SHMT2-213ENST00000554600 HLFQ16534 295 aa13.86□□□□□ -0.19
SHMT2-213ENST00000554600 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
SHMT2-213ENST00000554600 MBIPQ9NS73 344 aa13.86□□□□□ -0.19
SHMT2-213ENST00000554600 MAP3K15Q6ZN16 1313 aa13.86□□□□□ -0.19
SHMT2-213ENST00000554600 GTF2E1P29083 439 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-213ENST00000554600 PDE6BP35913 854 aa13.85□□□□□ -0.19
SHMT2-213ENST00000554600 AIMP1Q12904 312 aaKnown RBP13.85□□□□□ -0.19
SHMT2-213ENST00000554600 HDGFL1Q5TGJ6 251 aa13.85□□□□□ -0.19
SHMT2-213ENST00000554600 ZNF622Q969S3 477 aaKnown RBP eCLIP13.85□□□□□ -0.19
SHMT2-213ENST00000554600 IFT57Q9NWB7 429 aa13.85□□□□□ -0.19
SHMT2-213ENST00000554600 SALL2Q9Y467 1007 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-213ENST00000554600 ARFGEF2Q9Y6D5 1785 aa13.84□□□□□ -0.19
SHMT2-213ENST00000554600 GPTP24298 496 aa13.84□□□□□ -0.19
SHMT2-213ENST00000554600 PROSER3Q2NL68 480 aa13.84□□□□□ -0.19
SHMT2-213ENST00000554600 BRIP1Q9BX63 1249 aa13.84□□□□□ -0.19
SHMT2-213ENST00000554600 SLX4Q8IY92 1834 aa13.84□□□□□ -0.19
SHMT2-213ENST00000554600 CACNA1FO60840 1977 aa13.83□□□□□ -0.19
SHMT2-213ENST00000554600 ERVV-1B6SEH8 477 aa13.83□□□□□ -0.2
SHMT2-213ENST00000554600 ELL2O00472 640 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-213ENST00000554600 RGL2O15211 777 aa13.83□□□□□ -0.2
SHMT2-213ENST00000554600 DUSP27Q5VZP5 1158 aa13.83□□□□□ -0.2
SHMT2-213ENST00000554600 TPTE2Q6XPS3 522 aa13.83□□□□□ -0.2
SHMT2-213ENST00000554600 TTLL6Q8N841 843 aa13.83□□□□□ -0.2
SHMT2-213ENST00000554600 ZNF853P0CG23 659 aa13.82□□□□□ -0.2
SHMT2-213ENST00000554600 PDIA6Q15084 440 aa13.82□□□□□ -0.2
SHMT2-213ENST00000554600 COPS6Q7L5N1 327 aa13.82□□□□□ -0.2
SHMT2-213ENST00000554600 XAGE3Q8WTP9 111 aa13.82□□□□□ -0.2
SHMT2-213ENST00000554600 DDX21Q9NR30 783 aaKnown RBP eCLIP13.82□□□□□ -0.2
SHMT2-213ENST00000554600 CHPF2Q9P2E5 772 aa13.82□□□□□ -0.2
SHMT2-213ENST00000554600 PDZRN3Q9UPQ7 1066 aa13.82□□□□□ -0.2
SHMT2-213ENST00000554600 HOXB7P09629 217 aa13.81□□□□□ -0.2
SHMT2-213ENST00000554600 NYXQ9GZU5 481 aa13.81□□□□□ -0.2
SHMT2-213ENST00000554600 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-213ENST00000554600 TNRC6CQ9HCJ0 1690 aaKnown RBP13.81□□□□□ -0.2
SHMT2-213ENST00000554600 ATP10DQ9P241 1426 aa13.81□□□□□ -0.2
SHMT2-213ENST00000554600 FER1L6Q2WGJ9 1857 aa13.8□□□□□ -0.2
SHMT2-213ENST00000554600 DICER1Q9UPY3 1922 aaKnown RBP13.8□□□□□ -0.2
SHMT2-213ENST00000554600 GIGYF2Q6Y7W6 1299 aaKnown RBP13.8□□□□□ -0.2
SHMT2-213ENST00000554600 NUTM1Q86Y26 1132 aa13.8□□□□□ -0.2
SHMT2-213ENST00000554600 WWC1Q8IX03 1113 aa13.8□□□□□ -0.2
SHMT2-213ENST00000554600 ZNF526Q8TF50 670 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-213ENST00000554600 DBF4Q9UBU7 674 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-213ENST00000554600 LAMB2P55268 1798 aa13.79□□□□□ -0.2
SHMT2-213ENST00000554600 CCDC27Q2M243 656 aa13.79□□□□□ -0.2
SHMT2-213ENST00000554600 LRP10Q7Z4F1 713 aa13.79□□□□□ -0.2
SHMT2-213ENST00000554600 TSR2Q969E8 191 aaKnown RBP13.79□□□□□ -0.2
SHMT2-213ENST00000554600 HSP90AB3PQ58FF7 597 aa13.78□□□□□ -0.2
SHMT2-213ENST00000554600 PPP1R42Q7Z4L9 355 aa13.78□□□□□ -0.2
SHMT2-213ENST00000554600 C8orf58Q8NAV2 365 aa13.78□□□□□ -0.2
SHMT2-213ENST00000554600 CNKSR1Q969H4 720 aa13.78□□□□□ -0.2
SHMT2-213ENST00000554600 MASTLQ96GX5 879 aa13.78□□□□□ -0.2
SHMT2-213ENST00000554600 HYPKQ9NX55 129 aa13.78□□□□□ -0.2
SHMT2-213ENST00000554600 TIAM2Q8IVF5 1701 aa13.78□□□□□ -0.2
SHMT2-213ENST00000554600 SRGNP10124 158 aa13.77□□□□□ -0.21
SHMT2-213ENST00000554600 ERFEQ4G0M1 354 aa13.77□□□□□ -0.21
SHMT2-213ENST00000554600 PARP10Q53GL7 1025 aa13.77□□□□□ -0.21
SHMT2-213ENST00000554600 SUSD4Q5VX71 490 aa13.77□□□□□ -0.21
SHMT2-213ENST00000554600 C9orf131Q5VYM1 1079 aa13.77□□□□□ -0.21
SHMT2-213ENST00000554600 STYK1Q6J9G0 422 aa13.77□□□□□ -0.21
SHMT2-213ENST00000554600 UBN2Q6ZU65 1347 aa13.77□□□□□ -0.21
SHMT2-213ENST00000554600 ZNF34Q8IZ26 560 aa13.77□□□□□ -0.21
SHMT2-213ENST00000554600 TAF1P21675 1872 aa13.76□□□□□ -0.21
SHMT2-213ENST00000554600 ABCC12Q96J65 1359 aa13.76□□□□□ -0.21
SHMT2-213ENST00000554600 IL16Q14005 1332 aa13.76□□□□□ -0.21
SHMT2-213ENST00000554600 C21orf2O43822 256 aa13.76□□□□□ -0.21
SHMT2-213ENST00000554600 NPR1P16066 1061 aa13.76□□□□□ -0.21
SHMT2-213ENST00000554600 RASSF7Q02833 373 aa13.76□□□□□ -0.21
SHMT2-213ENST00000554600 CHMP4AQ9BY43 222 aa13.76□□□□□ -0.21
SHMT2-213ENST00000554600 GPBP1L1Q9HC44 474 aaPredicted RBP13.76□□□□□ -0.21
SHMT2-213ENST00000554600 RNF181Q9P0P0 153 aa13.76□□□□□ -0.21
SHMT2-213ENST00000554600 ADCY9O60503 1353 aa13.75□□□□□ -0.21
SHMT2-213ENST00000554600 IBTKQ9P2D0 1353 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-213ENST00000554600 GOLGA2Q08379 1002 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms