RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 PRPF40BQ6NWY9 871 aaKnown RBP9.05□□□□□ -0.96
PCNX4-208ENST00000554534 MCM10Q7L590 875 aa9.05□□□□□ -0.96
PCNX4-208ENST00000554534 ZNF277Q9NRM2 450 aaPredicted RBP9.05□□□□□ -0.96
PCNX4-208ENST00000554534 MRC1P22897 1456 aa9.04□□□□□ -0.96
PCNX4-208ENST00000554534 A0A087WZG4 1122 aa9.04□□□□□ -0.96
PCNX4-208ENST00000554534 BTBD11A6QL63 1104 aa9.04□□□□□ -0.96
PCNX4-208ENST00000554534 DZIP3Q86Y13 1208 aaKnown RBP9.04□□□□□ -0.96
PCNX4-208ENST00000554534 VSIG10Q8N0Z9 540 aa9.04□□□□□ -0.96
PCNX4-208ENST00000554534 CNBD1Q8NA66 436 aa9.04□□□□□ -0.96
PCNX4-208ENST00000554534 TAOK3Q9H2K8 898 aa9.04□□□□□ -0.96
PCNX4-208ENST00000554534 ZNF541Q9H0D2 1346 aa9.04□□□□□ -0.96
PCNX4-208ENST00000554534 SRGNP10124 158 aa9.03□□□□□ -0.96
PCNX4-208ENST00000554534 PRKAR2BP31323 418 aa9.03□□□□□ -0.96
PCNX4-208ENST00000554534 VEGFBP49765 207 aa9.03□□□□□ -0.96
PCNX4-208ENST00000554534 HLFQ16534 295 aa9.03□□□□□ -0.96
PCNX4-208ENST00000554534 ZNF428Q96B54 188 aa9.03□□□□□ -0.96
PCNX4-208ENST00000554534 FMNL2Q96PY5 1086 aa9.03□□□□□ -0.96
PCNX4-208ENST00000554534 SIPA1L3O60292 1781 aaPredicted RBP9.02□□□□□ -0.97
PCNX4-208ENST00000554534 NBPF26B4DH59 902 aa9.02□□□□□ -0.97
PCNX4-208ENST00000554534 IL6STP40189 918 aaPredicted RBP9.02□□□□□ -0.97
PCNX4-208ENST00000554534 ST5P78524 1137 aa9.02□□□□□ -0.97
PCNX4-208ENST00000554534 GRM1Q13255 1194 aa9.02□□□□□ -0.97
PCNX4-208ENST00000554534 MAP1SQ66K74 1059 aaPredicted RBP9.02□□□□□ -0.97
PCNX4-208ENST00000554534 NBPF10Q6P3W6 841 aaKnown RBP9.02□□□□□ -0.97
PCNX4-208ENST00000554534 NPM2Q86SE8 214 aaKnown RBP9.02□□□□□ -0.97
PCNX4-208ENST00000554534 NBPF5PQ86XG9 351 aaPredicted RBP9.02□□□□□ -0.97
PCNX4-208ENST00000554534 NBPF15Q8N660 670 aa9.02□□□□□ -0.97
PCNX4-208ENST00000554534 MASTLQ96GX5 879 aa9.02□□□□□ -0.97
PCNX4-208ENST00000554534 STYK1Q6J9G0 422 aa9.01□□□□□ -0.97
PCNX4-208ENST00000554534 NUTM1Q86Y26 1132 aa9.01□□□□□ -0.97
PCNX4-208ENST00000554534 SYNE4Q8N205 404 aa9.01□□□□□ -0.97
PCNX4-208ENST00000554534 C7orf43Q8WVR3 580 aa9.01□□□□□ -0.97
PCNX4-208ENST00000554534 CNKSR1Q969H4 720 aa9.01□□□□□ -0.97
PCNX4-208ENST00000554534 TAF1DQ9H5J8 278 aaPredicted RBP9.01□□□□□ -0.97
PCNX4-208ENST00000554534 NIP7Q9Y221 180 aaKnown RBP eCLIP9.01□□□□□ -0.97
PCNX4-208ENST00000554534 GJA3Q9Y6H8 435 aa9.01□□□□□ -0.97
PCNX4-208ENST00000554534 COL3A1P02461 1466 aaPredicted RBP9.01□□□□□ -0.97
PCNX4-208ENST00000554534 RNF123Q5XPI4 1314 aa9.01□□□□□ -0.97
PCNX4-208ENST00000554534 ZC3H4Q9UPT8 1303 aaKnown RBP9.01□□□□□ -0.97
PCNX4-208ENST00000554534 SCN7AQ01118 1682 aa9□□□□□ -0.97
PCNX4-208ENST00000554534 ITGBL1O95965 494 aaPredicted RBP9□□□□□ -0.97
PCNX4-208ENST00000554534 LBX1P52954 281 aa9□□□□□ -0.97
PCNX4-208ENST00000554534 GAS2L2Q8NHY3 880 aa9□□□□□ -0.97
PCNX4-208ENST00000554534 TEX13AQ9BXU3 409 aaPredicted RBP9□□□□□ -0.97
PCNX4-208ENST00000554534 RSPH6AQ9H0K4 717 aa9□□□□□ -0.97
PCNX4-208ENST00000554534 CREBZFQ9NS37 354 aa9□□□□□ -0.97
PCNX4-208ENST00000554534 RRP7AQ9Y3A4 280 aaKnown RBP9□□□□□ -0.97
PCNX4-208ENST00000554534 U2AF1L5P0DN76 240 aaPredicted RBP8.99□□□□□ -0.97
PCNX4-208ENST00000554534 GPTP24298 496 aa8.99□□□□□ -0.97
PCNX4-208ENST00000554534 U2AF1Q01081 240 aaKnown RBP eCLIP8.99□□□□□ -0.97
PCNX4-208ENST00000554534 THUMPD2Q9BTF0 503 aaKnown RBP8.99□□□□□ -0.97
PCNX4-208ENST00000554534 TSKSQ9UJT2 592 aa8.99□□□□□ -0.97
PCNX4-208ENST00000554534 PASKQ96RG2 1323 aa8.99□□□□□ -0.97
PCNX4-208ENST00000554534 TMEM88BA6NKF7 163 aa8.98□□□□□ -0.97
PCNX4-208ENST00000554534 TRAF5O00463 557 aa8.98□□□□□ -0.97
PCNX4-208ENST00000554534 MYL6BP14649 208 aa8.98□□□□□ -0.97
PCNX4-208ENST00000554534 NPR1P16066 1061 aa8.98□□□□□ -0.97
PCNX4-208ENST00000554534 GTF2E1P29083 439 aaPredicted RBP8.98□□□□□ -0.97
PCNX4-208ENST00000554534 EPHX2P34913 555 aa8.98□□□□□ -0.97
PCNX4-208ENST00000554534 FKBP4Q02790 459 aaKnown RBP eCLIP8.98□□□□□ -0.97
PCNX4-208ENST00000554534 CCDC93Q567U6 631 aa8.98□□□□□ -0.97
PCNX4-208ENST00000554534 TTLL7Q6ZT98 887 aa8.98□□□□□ -0.97
PCNX4-208ENST00000554534 C3orf67Q6ZVT6 689 aa8.98□□□□□ -0.97
PCNX4-208ENST00000554534 PAXIP1Q6ZW49 1069 aaPredicted RBP8.98□□□□□ -0.97
PCNX4-208ENST00000554534 CNTROBQ8N137 903 aa8.98□□□□□ -0.97
PCNX4-208ENST00000554534 HACL1Q9UJ83 578 aa8.98□□□□□ -0.97
PCNX4-208ENST00000554534 BCORQ6W2J9 1755 aa8.98□□□□□ -0.97
PCNX4-208ENST00000554534 CNTNAP1P78357 1384 aa8.98□□□□□ -0.97
PCNX4-208ENST00000554534 COL4A5P29400 1685 aa8.97□□□□□ -0.97
PCNX4-208ENST00000554534 SNRPA1P09661 255 aaKnown RBP8.97□□□□□ -0.97
PCNX4-208ENST00000554534 IARSP41252 1262 aaKnown RBP8.97□□□□□ -0.97
PCNX4-208ENST00000554534 EPS15P42566 896 aa8.97□□□□□ -0.97
PCNX4-208ENST00000554534 DLK2Q6UY11 383 aa8.97□□□□□ -0.97
PCNX4-208ENST00000554534 TPTE2Q6XPS3 522 aa8.97□□□□□ -0.97
PCNX4-208ENST00000554534 LDHDQ86WU2 507 aa8.97□□□□□ -0.97
PCNX4-208ENST00000554534 ABT1Q9ULW3 272 aaKnown RBP8.97□□□□□ -0.97
PCNX4-208ENST00000554534 LTBP3Q9NS15 1303 aa8.97□□□□□ -0.97
PCNX4-208ENST00000554534 ARFGEF2Q9Y6D5 1785 aa8.96□□□□□ -0.97
PCNX4-208ENST00000554534 DEFB115Q30KQ5 88 aa8.96□□□□□ -0.98
PCNX4-208ENST00000554534 RTF1Q92541 710 aaKnown RBP8.96□□□□□ -0.98
PCNX4-208ENST00000554534 AIDAQ96BJ3 306 aa8.96□□□□□ -0.98
PCNX4-208ENST00000554534 ZBTB3Q9H5J0 574 aa8.96□□□□□ -0.98
PCNX4-208ENST00000554534 CLSPNQ9HAW4 1339 aa8.96□□□□□ -0.98
PCNX4-208ENST00000554534 CEMIPQ8WUJ3 1361 aa8.96□□□□□ -0.98
PCNX4-208ENST00000554534 ABCC12Q96J65 1359 aa8.96□□□□□ -0.98
PCNX4-208ENST00000554534 SCN4AP35499 1836 aa8.96□□□□□ -0.98
PCNX4-208ENST00000554534 LTBP1Q14766 1721 aa8.95□□□□□ -0.98
PCNX4-208ENST00000554534 IQCA1LA6NCM1 817 aa8.95□□□□□ -0.98
PCNX4-208ENST00000554534 AOC2O75106 756 aa8.95□□□□□ -0.98
PCNX4-208ENST00000554534 ANXA1P04083 346 aa8.95□□□□□ -0.98
PCNX4-208ENST00000554534 HSPA8P11142 646 aaKnown RBP8.95□□□□□ -0.98
PCNX4-208ENST00000554534 PPP2R1AP30153 589 aa8.95□□□□□ -0.98
PCNX4-208ENST00000554534 CTCFP49711 727 aaPredicted RBP8.95□□□□□ -0.98
PCNX4-208ENST00000554534 SUSD4Q5VX71 490 aa8.95□□□□□ -0.98
PCNX4-208ENST00000554534 CYP4F22Q6NT55 531 aa8.95□□□□□ -0.98
PCNX4-208ENST00000554534 NECTIN2Q92692 538 aa8.95□□□□□ -0.98
PCNX4-208ENST00000554534 L3MBTL3Q96JM7 780 aaPredicted RBP8.95□□□□□ -0.98
PCNX4-208ENST00000554534 WBP1LQ9NX94 342 aa8.95□□□□□ -0.98
PCNX4-208ENST00000554534 PDZRN3Q9UPQ7 1066 aa8.95□□□□□ -0.98
PCNX4-208ENST00000554534 NUP98P52948 1817 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms