RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 KDM3BQ7LBC6 1761 aa29.01■■■□□ 2.23
RCCD1-202ENST00000554302 TNRC6CQ9HCJ0 1690 aaKnown RBP29■■■□□ 2.23
RCCD1-202ENST00000554302 NEFMP07197 916 aa29■■■□□ 2.23
RCCD1-202ENST00000554302 MIS18AQ9NYP9 233 aa29■■■□□ 2.23
RCCD1-202ENST00000554302 LAMB4A4D0S4 1761 aa29■■■□□ 2.23
RCCD1-202ENST00000554302 ZNF622Q969S3 477 aaKnown RBP eCLIP28.99■■■□□ 2.23
RCCD1-202ENST00000554302 NFE2L2Q16236 605 aa28.98■■■□□ 2.23
RCCD1-202ENST00000554302 PNISRQ8TF01 805 aaKnown RBP28.98■■■□□ 2.23
RCCD1-202ENST00000554302 ZNF652Q9Y2D9 606 aa28.98■■■□□ 2.23
RCCD1-202ENST00000554302 APLP1P51693 650 aa28.97■■■□□ 2.23
RCCD1-202ENST00000554302 ST5P78524 1137 aa28.97■■■□□ 2.23
RCCD1-202ENST00000554302 RRAGCQ9HB90 399 aa28.97■■■□□ 2.23
RCCD1-202ENST00000554302 FER1L6Q2WGJ9 1857 aa28.96■■■□□ 2.23
RCCD1-202ENST00000554302 ZBTB22O15209 634 aa28.96■■■□□ 2.23
RCCD1-202ENST00000554302 SRGNP10124 158 aa28.96■■■□□ 2.23
RCCD1-202ENST00000554302 STYK1Q6J9G0 422 aa28.96■■■□□ 2.23
RCCD1-202ENST00000554302 PNNQ9H307 717 aaKnown RBP28.95■■■□□ 2.22
RCCD1-202ENST00000554302 CCDC88AQ3V6T2 1871 aa28.95■■■□□ 2.22
RCCD1-202ENST00000554302 TIAM2Q8IVF5 1701 aa28.94■■■□□ 2.22
RCCD1-202ENST00000554302 ARFGEF2Q9Y6D5 1785 aa28.94■■■□□ 2.22
RCCD1-202ENST00000554302 GLTPD2A6NH11 291 aa28.94■■■□□ 2.22
RCCD1-202ENST00000554302 C21orf2O43822 256 aa28.94■■■□□ 2.22
RCCD1-202ENST00000554302 C16orf71Q8IYS4 520 aaPredicted RBP28.94■■■□□ 2.22
RCCD1-202ENST00000554302 EIF4A1P60842 406 aaKnown RBP28.93■■■□□ 2.22
RCCD1-202ENST00000554302 FSTL1Q12841 308 aa28.93■■■□□ 2.22
RCCD1-202ENST00000554302 NBPF5PQ86XG9 351 aaPredicted RBP28.93■■■□□ 2.22
RCCD1-202ENST00000554302 CNKSR1Q969H4 720 aa28.93■■■□□ 2.22
RCCD1-202ENST00000554302 KLRG2A4D1S0 409 aaPredicted RBP28.92■■■□□ 2.22
RCCD1-202ENST00000554302 NPHP1O15259 732 aa28.92■■■□□ 2.22
RCCD1-202ENST00000554302 RALBP1Q15311 655 aa28.92■■■□□ 2.22
RCCD1-202ENST00000554302 MASTLQ96GX5 879 aa28.92■■■□□ 2.22
RCCD1-202ENST00000554302 THUMPD2Q9BTF0 503 aaKnown RBP28.92■■■□□ 2.22
RCCD1-202ENST00000554302 SLX4Q8IY92 1834 aa28.92■■■□□ 2.22
RCCD1-202ENST00000554302 LTBP3Q9NS15 1303 aa28.92■■■□□ 2.22
RCCD1-202ENST00000554302 HLFQ16534 295 aa28.9■■■□□ 2.22
RCCD1-202ENST00000554302 PRPF40BQ6NWY9 871 aaKnown RBP28.9■■■□□ 2.22
RCCD1-202ENST00000554302 DNAJC5GQ8N7S2 189 aa28.9■■■□□ 2.22
RCCD1-202ENST00000554302 NIP7Q9Y221 180 aaKnown RBP eCLIP28.9■■■□□ 2.22
RCCD1-202ENST00000554302 MAPK8IP3Q9UPT6 1336 aa28.9■■■□□ 2.22
RCCD1-202ENST00000554302 DICER1Q9UPY3 1922 aaKnown RBP28.89■■■□□ 2.22
RCCD1-202ENST00000554302 TPTE2Q6XPS3 522 aa28.89■■■□□ 2.22
RCCD1-202ENST00000554302 ZNF219Q9P2Y4 722 aaPredicted RBP28.88■■■□□ 2.21
RCCD1-202ENST00000554302 WDR90Q96KV7 1748 aa28.87■■■□□ 2.21
RCCD1-202ENST00000554302 C7orf43Q8WVR3 580 aa28.87■■■□□ 2.21
RCCD1-202ENST00000554302 CACNA1SQ13698 1873 aa28.87■■■□□ 2.21
RCCD1-202ENST00000554302 ERVV-1B6SEH8 477 aa28.86■■■□□ 2.21
RCCD1-202ENST00000554302 FOXD4L1Q9NU39 408 aa28.86■■■□□ 2.21
RCCD1-202ENST00000554302 VEGFAP15692 232 aaPredicted RBP28.85■■■□□ 2.21
RCCD1-202ENST00000554302 NPR1P16066 1061 aa28.85■■■□□ 2.21
RCCD1-202ENST00000554302 SOGA3Q5TF21 947 aa28.85■■■□□ 2.21
RCCD1-202ENST00000554302 TAOK3Q9H2K8 898 aa28.85■■■□□ 2.21
RCCD1-202ENST00000554302 POTECB2RU33 542 aa28.83■■■□□ 2.21
RCCD1-202ENST00000554302 ERFEQ4G0M1 354 aa28.83■■■□□ 2.21
RCCD1-202ENST00000554302 MAP3K15Q6ZN16 1313 aa28.83■■■□□ 2.21
RCCD1-202ENST00000554302 TTLL7Q6ZT98 887 aa28.82■■■□□ 2.2
RCCD1-202ENST00000554302 SMC1BQ8NDV3 1235 aa28.82■■■□□ 2.2
RCCD1-202ENST00000554302 NUP98P52948 1817 aa28.82■■■□□ 2.2
RCCD1-202ENST00000554302 ERBB4Q15303 1308 aa28.81■■■□□ 2.2
RCCD1-202ENST00000554302 RIPK4P57078 832 aa28.81■■■□□ 2.2
RCCD1-202ENST00000554302 DPY19L2Q6NUT2 758 aa28.81■■■□□ 2.2
RCCD1-202ENST00000554302 BABAM1Q9NWV8 329 aa28.81■■■□□ 2.2
RCCD1-202ENST00000554302 RRP7AQ9Y3A4 280 aaKnown RBP28.81■■■□□ 2.2
RCCD1-202ENST00000554302 NGEFQ8N5V2 710 aa28.8■■■□□ 2.2
RCCD1-202ENST00000554302 FAM177BA6PVY3 158 aa28.79■■■□□ 2.2
RCCD1-202ENST00000554302 TMPOP42166 694 aaKnown RBP28.79■■■□□ 2.2
RCCD1-202ENST00000554302 DDX10Q13206 875 aaKnown RBP28.79■■■□□ 2.2
RCCD1-202ENST00000554302 TSPYL4Q9UJ04 414 aa28.79■■■□□ 2.2
RCCD1-202ENST00000554302 MYBBP1AQ9BQG0 1328 aaKnown RBP28.78■■■□□ 2.2
RCCD1-202ENST00000554302 MYL6BP14649 208 aa28.78■■■□□ 2.2
RCCD1-202ENST00000554302 CCDC93Q567U6 631 aa28.78■■■□□ 2.2
RCCD1-202ENST00000554302 KIF6Q6ZMV9 814 aa28.78■■■□□ 2.2
RCCD1-202ENST00000554302 LRP10Q7Z4F1 713 aa28.78■■■□□ 2.2
RCCD1-202ENST00000554302 IBTKQ9P2D0 1353 aaPredicted RBP28.77■■■□□ 2.2
RCCD1-202ENST00000554302 CRY2Q49AN0 593 aa28.77■■■□□ 2.2
RCCD1-202ENST00000554302 NYXQ9GZU5 481 aa28.77■■■□□ 2.2
RCCD1-202ENST00000554302 ABCC12Q96J65 1359 aa28.76■■■□□ 2.2
RCCD1-202ENST00000554302 HTRA3P83110 453 aa28.76■■■□□ 2.19
RCCD1-202ENST00000554302 RIC1Q4ADV7 1423 aa28.76■■■□□ 2.19
RCCD1-202ENST00000554302 UBN2Q6ZU65 1347 aa28.75■■■□□ 2.19
RCCD1-202ENST00000554302 ALDH1B1P30837 517 aa28.75■■■□□ 2.19
RCCD1-202ENST00000554302 PDIA6Q15084 440 aa28.75■■■□□ 2.19
RCCD1-202ENST00000554302 GTF2E1P29083 439 aaPredicted RBP28.74■■■□□ 2.19
RCCD1-202ENST00000554302 LMOD3Q0VAK6 560 aa28.74■■■□□ 2.19
RCCD1-202ENST00000554302 ZNF34Q8IZ26 560 aa28.74■■■□□ 2.19
RCCD1-202ENST00000554302 FKBP4Q02790 459 aaKnown RBP eCLIP28.73■■■□□ 2.19
RCCD1-202ENST00000554302 GIGYF2Q6Y7W6 1299 aaKnown RBP28.73■■■□□ 2.19
RCCD1-202ENST00000554302 NUTM1Q86Y26 1132 aa28.73■■■□□ 2.19
RCCD1-202ENST00000554302 SNED1Q8TER0 1413 aa28.73■■■□□ 2.19
RCCD1-202ENST00000554302 KLRG1Q96E93 195 aa28.73■■■□□ 2.19
RCCD1-202ENST00000554302 ZBTB3Q9H5J0 574 aa28.73■■■□□ 2.19
RCCD1-202ENST00000554302 OLFM4Q6UX06 510 aa28.72■■■□□ 2.19
RCCD1-202ENST00000554302 DDNO94850 711 aaPredicted RBP28.71■■■□□ 2.19
RCCD1-202ENST00000554302 SUSD4Q5VX71 490 aa28.71■■■□□ 2.19
RCCD1-202ENST00000554302 RTKN2Q8IZC4 609 aa28.71■■■□□ 2.19
RCCD1-202ENST00000554302 GPTP24298 496 aa28.7■■■□□ 2.18
RCCD1-202ENST00000554302 IFFO2Q5TF58 517 aa28.7■■■□□ 2.18
RCCD1-202ENST00000554302 NTSR2O95665 410 aa28.69■■■□□ 2.18
RCCD1-202ENST00000554302 HOXA10P31260 410 aaPredicted RBP28.69■■■□□ 2.18
RCCD1-202ENST00000554302 JMYQ8N9B5 988 aa28.69■■■□□ 2.18
RCCD1-202ENST00000554302 EIF2S2P20042 333 aaKnown RBP28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms