RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 PRPF40BQ6NWY9 871 aaKnown RBP18.8■□□□□ 0.6
NEDD1-206ENST00000554226 ZNF790Q6PG37 636 aa18.8■□□□□ 0.6
NEDD1-206ENST00000554226 CNBD1Q8NA66 436 aa18.8■□□□□ 0.6
NEDD1-206ENST00000554226 C7orf43Q8WVR3 580 aa18.8■□□□□ 0.6
NEDD1-206ENST00000554226 TAF1DQ9H5J8 278 aaPredicted RBP18.8■□□□□ 0.6
NEDD1-206ENST00000554226 CCDC24Q8N4L8 307 aa18.79■□□□□ 0.6
NEDD1-206ENST00000554226 MASTLQ96GX5 879 aa18.79■□□□□ 0.6
NEDD1-206ENST00000554226 COL3A1P02461 1466 aaPredicted RBP18.78■□□□□ 0.6
NEDD1-206ENST00000554226 CAMTA2O94983 1202 aa18.78■□□□□ 0.6
NEDD1-206ENST00000554226 SETDB2Q96T68 719 aa18.78■□□□□ 0.6
NEDD1-206ENST00000554226 TBC1D2BQ9UPU7 963 aa18.78■□□□□ 0.6
NEDD1-206ENST00000554226 DIAPH1O60610 1272 aaKnown RBP18.77■□□□□ 0.6
NEDD1-206ENST00000554226 FAM161AQ3B820 660 aa18.77■□□□□ 0.6
NEDD1-206ENST00000554226 IL17REQ8NFR9 667 aa18.77■□□□□ 0.6
NEDD1-206ENST00000554226 ABHD8Q96I13 439 aa18.77■□□□□ 0.6
NEDD1-206ENST00000554226 CEMIPQ8WUJ3 1361 aa18.77■□□□□ 0.6
NEDD1-206ENST00000554226 KLRG2A4D1S0 409 aaPredicted RBP18.76■□□□□ 0.59
NEDD1-206ENST00000554226 RASSF10A6NK89 507 aa18.76■□□□□ 0.59
NEDD1-206ENST00000554226 RGL2O15211 777 aa18.76■□□□□ 0.59
NEDD1-206ENST00000554226 HSPA8P11142 646 aaKnown RBP18.76■□□□□ 0.59
NEDD1-206ENST00000554226 ST5P78524 1137 aa18.76■□□□□ 0.59
NEDD1-206ENST00000554226 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
NEDD1-206ENST00000554226 THSD7BQ9C0I4 1608 aa18.75■□□□□ 0.59
NEDD1-206ENST00000554226 TEFQ10587 303 aa18.75■□□□□ 0.59
NEDD1-206ENST00000554226 CLEC4GQ6UXB4 293 aa18.75■□□□□ 0.59
NEDD1-206ENST00000554226 FMNL2Q96PY5 1086 aa18.75■□□□□ 0.59
NEDD1-206ENST00000554226 GNAT3A8MTJ3 354 aa18.74■□□□□ 0.59
NEDD1-206ENST00000554226 CCDC93Q567U6 631 aa18.74■□□□□ 0.59
NEDD1-206ENST00000554226 GAS2L2Q8NHY3 880 aa18.74■□□□□ 0.59
NEDD1-206ENST00000554226 EAPPQ56P03 285 aaPredicted RBP18.73■□□□□ 0.59
NEDD1-206ENST00000554226 HACL1Q9UJ83 578 aa18.73■□□□□ 0.59
NEDD1-206ENST00000554226 ZNF541Q9H0D2 1346 aa18.73■□□□□ 0.59
NEDD1-206ENST00000554226 PER1O15534 1290 aaPredicted RBP18.72■□□□□ 0.59
NEDD1-206ENST00000554226 A1BGP04217 495 aa18.72■□□□□ 0.59
NEDD1-206ENST00000554226 NPR1P16066 1061 aa18.72■□□□□ 0.59
NEDD1-206ENST00000554226 MAP2K1Q02750 393 aaPredicted RBP18.72■□□□□ 0.59
NEDD1-206ENST00000554226 FKBP4Q02790 459 aaKnown RBP eCLIP18.72■□□□□ 0.59
NEDD1-206ENST00000554226 DEFB115Q30KQ5 88 aa18.72■□□□□ 0.59
NEDD1-206ENST00000554226 SNED1Q8TER0 1413 aa18.72■□□□□ 0.59
NEDD1-206ENST00000554226 EPHX2P34913 555 aa18.71■□□□□ 0.59
NEDD1-206ENST00000554226 NPM2Q86SE8 214 aaKnown RBP18.71■□□□□ 0.59
NEDD1-206ENST00000554226 PNMA8AQ86V59 439 aaPredicted RBP18.71■□□□□ 0.59
NEDD1-206ENST00000554226 DZIP3Q86Y13 1208 aaKnown RBP18.71■□□□□ 0.59
NEDD1-206ENST00000554226 ZNF330Q9Y3S2 320 aaPredicted RBP18.71■□□□□ 0.59
NEDD1-206ENST00000554226 WDR33Q9C0J8 1336 aaKnown RBP18.71■□□□□ 0.59
NEDD1-206ENST00000554226 NPHP1O15259 732 aa18.7■□□□□ 0.58
NEDD1-206ENST00000554226 NPC1L1Q9UHC9 1359 aa18.69■□□□□ 0.58
NEDD1-206ENST00000554226 FZD9O00144 591 aa18.69■□□□□ 0.58
NEDD1-206ENST00000554226 NBPF5PQ86XG9 351 aaPredicted RBP18.69■□□□□ 0.58
NEDD1-206ENST00000554226 RTKN2Q8IZC4 609 aa18.69■□□□□ 0.58
NEDD1-206ENST00000554226 CNTROBQ8N137 903 aa18.69■□□□□ 0.58
NEDD1-206ENST00000554226 CLEC11AQ9Y240 323 aa18.69■□□□□ 0.58
NEDD1-206ENST00000554226 ZNF652Q9Y2D9 606 aa18.69■□□□□ 0.58
NEDD1-206ENST00000554226 RGS19P49795 217 aa18.68■□□□□ 0.58
NEDD1-206ENST00000554226 MAP1SQ66K74 1059 aaPredicted RBP18.68■□□□□ 0.58
NEDD1-206ENST00000554226 ZNF277Q9NRM2 450 aaPredicted RBP18.68■□□□□ 0.58
NEDD1-206ENST00000554226 RNF123Q5XPI4 1314 aa18.68■□□□□ 0.58
NEDD1-206ENST00000554226 MLLT1Q03111 559 aaPredicted RBP18.67■□□□□ 0.58
NEDD1-206ENST00000554226 GPC2Q8N158 579 aa18.67■□□□□ 0.58
NEDD1-206ENST00000554226 PCDH10Q9P2E7 1040 aa18.67■□□□□ 0.58
NEDD1-206ENST00000554226 KIF7Q2M1P5 1343 aa18.67■□□□□ 0.58
NEDD1-206ENST00000554226 TPTE2Q6XPS3 522 aa18.66■□□□□ 0.58
NEDD1-206ENST00000554226 ABT1Q9ULW3 272 aaKnown RBP18.66■□□□□ 0.58
NEDD1-206ENST00000554226 USP16Q9Y5T5 823 aa18.66■□□□□ 0.58
NEDD1-206ENST00000554226 BTBD11A6QL63 1104 aa18.65■□□□□ 0.58
NEDD1-206ENST00000554226 IARSP41252 1262 aaKnown RBP18.65■□□□□ 0.58
NEDD1-206ENST00000554226 PSMD1Q99460 953 aa18.65■□□□□ 0.58
NEDD1-206ENST00000554226 LTBP1Q14766 1721 aa18.65■□□□□ 0.58
NEDD1-206ENST00000554226 TRPM7Q96QT4 1865 aa18.65■□□□□ 0.58
NEDD1-206ENST00000554226 LAMB4A4D0S4 1761 aa18.64■□□□□ 0.57
NEDD1-206ENST00000554226 KCNQ3O43525 872 aa18.64■□□□□ 0.57
NEDD1-206ENST00000554226 ALDH1B1P30837 517 aa18.64■□□□□ 0.57
NEDD1-206ENST00000554226 CRY2Q49AN0 593 aa18.64■□□□□ 0.57
NEDD1-206ENST00000554226 OLFM4Q6UX06 510 aa18.64■□□□□ 0.57
NEDD1-206ENST00000554226 DDX21Q9NR30 783 aaKnown RBP eCLIP18.64■□□□□ 0.57
NEDD1-206ENST00000554226 RIC1Q4ADV7 1423 aa18.64■□□□□ 0.57
NEDD1-206ENST00000554226 SNRPA1P09661 255 aaKnown RBP18.63■□□□□ 0.57
NEDD1-206ENST00000554226 COL4A5P29400 1685 aa18.63■□□□□ 0.57
NEDD1-206ENST00000554226 CCDC85CA6NKD9 419 aa18.62■□□□□ 0.57
NEDD1-206ENST00000554226 CC2D2BQ6DHV5 1058 aa18.62■□□□□ 0.57
NEDD1-206ENST00000554226 CAPNS2Q96L46 248 aa18.62■□□□□ 0.57
NEDD1-206ENST00000554226 NIP7Q9Y221 180 aaKnown RBP eCLIP18.62■□□□□ 0.57
NEDD1-206ENST00000554226 U2SURPO15042 1029 aaKnown RBP18.61■□□□□ 0.57
NEDD1-206ENST00000554226 SYNE4Q8N205 404 aa18.61■□□□□ 0.57
NEDD1-206ENST00000554226 PHACTR3Q96KR7 559 aa18.61■□□□□ 0.57
NEDD1-206ENST00000554226 NUP98P52948 1817 aa18.6■□□□□ 0.57
NEDD1-206ENST00000554226 NBPF26B4DH59 902 aa18.6■□□□□ 0.57
NEDD1-206ENST00000554226 ECE1P42892 770 aa18.6■□□□□ 0.57
NEDD1-206ENST00000554226 GRIPAP1Q4V328 841 aa18.6■□□□□ 0.57
NEDD1-206ENST00000554226 CC2D1BQ5T0F9 858 aaKnown RBP18.6■□□□□ 0.57
NEDD1-206ENST00000554226 NBPF10Q6P3W6 841 aaKnown RBP18.6■□□□□ 0.57
NEDD1-206ENST00000554226 NBPF15Q8N660 670 aa18.6■□□□□ 0.57
NEDD1-206ENST00000554226 RSPH6AQ9H0K4 717 aa18.6■□□□□ 0.57
NEDD1-206ENST00000554226 PRAMEF22A3QJZ6 481 aa18.59■□□□□ 0.57
NEDD1-206ENST00000554226 PIP4K2AP48426 406 aaPredicted RBP18.59■□□□□ 0.57
NEDD1-206ENST00000554226 JDP2Q8WYK2 163 aa18.59■□□□□ 0.57
NEDD1-206ENST00000554226 BEGAINQ9BUH8 593 aa18.59■□□□□ 0.57
NEDD1-206ENST00000554226 IBTKQ9P2D0 1353 aaPredicted RBP18.58■□□□□ 0.57
NEDD1-206ENST00000554226 HOXA10P31260 410 aaPredicted RBP18.58■□□□□ 0.56
NEDD1-206ENST00000554226 FMR1Q06787 632 aaKnown RBP eCLIP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms