RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 DDNO94850 711 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SNRPA1P09661 255 aaKnown RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 NFIXQ14938 502 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SLC4A8Q2Y0W8 1093 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SLC27A3Q5K4L6 730 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 GORABQ5T7V8 394 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 TTLL6Q8N841 843 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 IL17REQ8NFR9 667 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 XAGE3Q8WTP9 111 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 NLRP3Q96P20 1036 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 MYD88Q99836 296 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SIL1Q9H173 461 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SLC52A2Q9HAB3 445 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 PDE4DIPQ5VU43 2346 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 DISP2A7MBM2 1401 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 EIF2AK4Q9P2K8 1649 aaKnown RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 UNC13BO14795 1591 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 PNPLA7Q6ZV29 1317 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 CAMTA1Q9Y6Y1 1673 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 F6X3S4 739 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 PPIP5K2O43314 1243 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 YBX3P16989 372 aaKnown RBP eCLIP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 LMOD1P29536 600 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 EMP3P54852 163 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 C1QTNF8P60827 252 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 CCDC184Q52MB2 194 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 TBC1D9BQ66K14 1250 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 MAP1SQ66K74 1059 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 DDX46Q7L014 1031 aaKnown RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 UBE2Q2Q8WVN8 375 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 MPHOSPH8Q99549 860 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 ZBTB47Q9UFB7 747 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 CPSF1Q10570 1443 aaKnown RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 EDC4Q6P2E9 1401 aaKnown RBP3.2□□□□□ -1.9
PRPF39-205ENST00000554081 MROH2AA6NES4 1674 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 ATP7BP35670 1465 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 NRXN1Q9ULB1 1477 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 IQGAP3Q86VI3 1631 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 IRX6P78412 446 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-205ENST00000554081 PRAMEF18Q5VWM3 479 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 DBNDD1Q9H9R9 158 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 FOXD4L1Q9NU39 408 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 ATRNO75882 1429 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 RNF123Q5XPI4 1314 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 ANKARQ7Z5J8 1434 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 ONECUT3O60422 494 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-205ENST00000554081 RPS6KA4O75676 772 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 HMGB1P09429 215 aaKnown RBP3.19□□□□□ -1.9
PRPF39-205ENST00000554081 HLFQ16534 295 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 STK11IPQ8N1F8 1099 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 VEZTQ9HBM0 779 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 CHPF2Q9P2E5 772 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 SETBP1Q9Y6X0 1596 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 GYS1P13807 737 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 IL13P35225 146 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 EIF6P56537 245 aaKnown RBP3.19□□□□□ -1.9
PRPF39-205ENST00000554081 DUSP27Q5VZP5 1158 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 UBE3BQ7Z3V4 1068 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 SLC16A10Q8TF71 515 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 ZC3H12CQ9C0D7 883 aaKnown RBP3.19□□□□□ -1.9
PRPF39-205ENST00000554081 CNNM1Q9NRU3 951 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 COL5A2P05997 1499 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-205ENST00000554081 MYOM2P54296 1465 aa3.19□□□□□ -1.9
PRPF39-205ENST00000554081 USP19O94966 1318 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 ZC3H13Q5T200 1668 aaKnown RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 A0A087WZG4 1122 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 POTEB3A0JP26 581 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 ERVV-2B6SEH9 535 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 SNAP23O00161 211 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 POTEBQ6S5H4 581 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 DPP8Q6V1X1 898 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 ZSCAN29Q8IWY8 852 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 NEUROD6Q96NK8 337 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 TAOK3Q9H2K8 898 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 PHAXQ9H814 394 aaKnown RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 PXDNQ92626 1479 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 TULP4Q9NRJ4 1543 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 TRIOBPQ9H2D6 2365 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 DDX58O95786 925 aaKnown RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 TMPOP42166 694 aaKnown RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 LMOD3Q0VAK6 560 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 PROSER3Q2NL68 480 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 CWF19L2Q2TBE0 894 aaKnown RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 TBC1D10BQ4KMP7 808 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 FTSJ3Q8IY81 847 aaKnown RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 SLC4A9Q96Q91 983 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 SMC4Q9NTJ3 1288 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 MTMR7Q9Y216 660 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 INSRP06213 1382 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 CDK12Q9NYV4 1490 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-205ENST00000554081 CLSPNQ9HAW4 1339 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 DEPDC5O75140 1603 aa3.18□□□□□ -1.9
PRPF39-205ENST00000554081 PI4KAP2A4QPH2 592 aa3.17□□□□□ -1.9
PRPF39-205ENST00000554081 CCDC85CA6NKD9 419 aa3.17□□□□□ -1.9
PRPF39-205ENST00000554081 PDE6BP35913 854 aa3.17□□□□□ -1.9
PRPF39-205ENST00000554081 FMR1Q06787 632 aaKnown RBP eCLIP3.17□□□□□ -1.9
PRPF39-205ENST00000554081 NFE2L2Q16236 605 aa3.17□□□□□ -1.9
PRPF39-205ENST00000554081 CCDC27Q2M243 656 aa3.17□□□□□ -1.9
PRPF39-205ENST00000554081 WDR78Q5VTH9 848 aa3.17□□□□□ -1.9
PRPF39-205ENST00000554081 PRPF40BQ6NWY9 871 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms