RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 CRKLP46109 303 aaKnown RBP13.19□□□□□ -0.3
TMEM55B-205ENST00000554028 SF3B2Q13435 895 aaKnown RBP13.19□□□□□ -0.3
TMEM55B-205ENST00000554028 ITPK1Q13572 414 aa13.19□□□□□ -0.3
TMEM55B-205ENST00000554028 PLBD2Q8NHP8 589 aa13.19□□□□□ -0.3
TMEM55B-205ENST00000554028 HDAC5Q9UQL6 1122 aa13.19□□□□□ -0.3
TMEM55B-205ENST00000554028 A0A087WZG4 1122 aa13.18□□□□□ -0.3
TMEM55B-205ENST00000554028 PLSCR1O15162 318 aa13.18□□□□□ -0.3
TMEM55B-205ENST00000554028 RC3H1Q5TC82 1133 aaKnown RBP13.18□□□□□ -0.3
TMEM55B-205ENST00000554028 ZBTB7BO15156 539 aaPredicted RBP13.17□□□□□ -0.3
TMEM55B-205ENST00000554028 ALDH1L1O75891 902 aa13.17□□□□□ -0.3
TMEM55B-205ENST00000554028 GNAI3P08754 354 aa13.17□□□□□ -0.3
TMEM55B-205ENST00000554028 INTS5Q6P9B9 1019 aaKnown RBP13.17□□□□□ -0.3
TMEM55B-205ENST00000554028 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
TMEM55B-205ENST00000554028 LINS1Q8NG48 757 aa13.17□□□□□ -0.3
TMEM55B-205ENST00000554028 METTL22Q9BUU2 404 aaPredicted RBP13.17□□□□□ -0.3
TMEM55B-205ENST00000554028 ZBTB1Q9Y2K1 713 aa13.17□□□□□ -0.3
TMEM55B-205ENST00000554028 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
TMEM55B-205ENST00000554028 HSP90AB3PQ58FF7 597 aa13.16□□□□□ -0.3
TMEM55B-205ENST00000554028 LINC00116Q8NCU8 138 aa13.16□□□□□ -0.3
TMEM55B-205ENST00000554028 C5P01031 1676 aa13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 LAMB4A4D0S4 1761 aa13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 BEND3Q5T5X7 828 aa13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 TTLL7Q6ZT98 887 aa13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 DZIP3Q86Y13 1208 aaKnown RBP13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 AK7Q96M32 723 aa13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 MYD88Q99836 296 aa13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 ZBTB3Q9H5J0 574 aa13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 ZBTB40Q9NUA8 1239 aa13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 C9orf78Q9NZ63 289 aaPredicted RBP13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 RTCBQ9Y3I0 505 aaKnown RBP13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 ADCY9O60503 1353 aa13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 BRWD3Q6RI45 1802 aa13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 PXDNLA1KZ92 1463 aa13.15□□□□□ -0.3
TMEM55B-205ENST00000554028 MAP3K15Q6ZN16 1313 aa13.14□□□□□ -0.31
TMEM55B-205ENST00000554028 CACNA1FO60840 1977 aa13.14□□□□□ -0.31
TMEM55B-205ENST00000554028 ERVV-1B6SEH8 477 aa13.14□□□□□ -0.31
TMEM55B-205ENST00000554028 RPS6KA4O75676 772 aa13.14□□□□□ -0.31
TMEM55B-205ENST00000554028 KCNQ4P56696 695 aa13.14□□□□□ -0.31
TMEM55B-205ENST00000554028 TXNRD1Q16881 649 aa13.14□□□□□ -0.31
TMEM55B-205ENST00000554028 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
TMEM55B-205ENST00000554028 BTAF1O14981 1849 aa13.13□□□□□ -0.31
TMEM55B-205ENST00000554028 GNPATO15228 680 aa13.13□□□□□ -0.31
TMEM55B-205ENST00000554028 GNAI2P04899 355 aa13.13□□□□□ -0.31
TMEM55B-205ENST00000554028 UBTFL1P0CB47 393 aaPredicted RBP13.13□□□□□ -0.31
TMEM55B-205ENST00000554028 B4GALNT3Q6L9W6 998 aa13.13□□□□□ -0.31
TMEM55B-205ENST00000554028 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
TMEM55B-205ENST00000554028 ZNF652Q9Y2D9 606 aa13.13□□□□□ -0.31
TMEM55B-205ENST00000554028 TCIRG1Q13488 830 aa13.12□□□□□ -0.31
TMEM55B-205ENST00000554028 POLA2Q14181 598 aa13.12□□□□□ -0.31
TMEM55B-205ENST00000554028 GIGYF2Q6Y7W6 1299 aaKnown RBP13.12□□□□□ -0.31
TMEM55B-205ENST00000554028 CCDC125Q86Z20 511 aa13.12□□□□□ -0.31
TMEM55B-205ENST00000554028 TBC1D2BQ9UPU7 963 aa13.12□□□□□ -0.31
TMEM55B-205ENST00000554028 ZNF831Q5JPB2 1677 aa13.12□□□□□ -0.31
TMEM55B-205ENST00000554028 NEURL1BA8MQ27 555 aa13.11□□□□□ -0.31
TMEM55B-205ENST00000554028 ZPR1O75312 459 aa13.11□□□□□ -0.31
TMEM55B-205ENST00000554028 BAG6P46379 1132 aa13.11□□□□□ -0.31
TMEM55B-205ENST00000554028 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
TMEM55B-205ENST00000554028 CCDC191Q8NCU4 936 aa13.11□□□□□ -0.31
TMEM55B-205ENST00000554028 MEIS3Q99687 375 aa13.11□□□□□ -0.31
TMEM55B-205ENST00000554028 CWC25Q9NXE8 425 aaPredicted RBP13.11□□□□□ -0.31
TMEM55B-205ENST00000554028 SBF2Q86WG5 1849 aa13.11□□□□□ -0.31
TMEM55B-205ENST00000554028 COL15A1P39059 1388 aa13.1□□□□□ -0.31
TMEM55B-205ENST00000554028 ATP5J2-PTCD1G3V325 749 aa13.1□□□□□ -0.31
TMEM55B-205ENST00000554028 GRM8O00222 908 aa13.1□□□□□ -0.31
TMEM55B-205ENST00000554028 RGL2O15211 777 aa13.1□□□□□ -0.31
TMEM55B-205ENST00000554028 RFC4P35249 363 aa13.1□□□□□ -0.31
TMEM55B-205ENST00000554028 TRIM28Q13263 835 aaKnown RBP13.1□□□□□ -0.31
TMEM55B-205ENST00000554028 GCKRQ14397 625 aa13.1□□□□□ -0.31
TMEM55B-205ENST00000554028 CWF19L2Q2TBE0 894 aaKnown RBP13.1□□□□□ -0.31
TMEM55B-205ENST00000554028 RPAP2Q8IXW5 612 aaPredicted RBP13.1□□□□□ -0.31
TMEM55B-205ENST00000554028 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
TMEM55B-205ENST00000554028 LRRC4BQ9NT99 713 aa13.1□□□□□ -0.31
TMEM55B-205ENST00000554028 TJP1Q07157 1748 aa13.1□□□□□ -0.31
TMEM55B-205ENST00000554028 IBTKQ9P2D0 1353 aaPredicted RBP13.09□□□□□ -0.31
TMEM55B-205ENST00000554028 HMMRO75330 724 aa13.09□□□□□ -0.31
TMEM55B-205ENST00000554028 IGKV5-2P06315 115 aa13.09□□□□□ -0.31
TMEM55B-205ENST00000554028 CLEC4GQ6UXB4 293 aa13.09□□□□□ -0.31
TMEM55B-205ENST00000554028 CICQ96RK0 1608 aaPredicted RBP13.09□□□□□ -0.31
TMEM55B-205ENST00000554028 KCNA4P22459 653 aa13.08□□□□□ -0.32
TMEM55B-205ENST00000554028 CENPQQ7L2Z9 268 aaPredicted RBP13.08□□□□□ -0.32
TMEM55B-205ENST00000554028 PROM2Q8N271 834 aa13.08□□□□□ -0.32
TMEM55B-205ENST00000554028 FLAD1Q8NFF5 587 aa13.08□□□□□ -0.32
TMEM55B-205ENST00000554028 ISCA1Q9BUE6 129 aa13.08□□□□□ -0.32
TMEM55B-205ENST00000554028 C1orf115Q9H7X2 142 aa13.08□□□□□ -0.32
TMEM55B-205ENST00000554028 NARFQ9UHQ1 456 aa13.08□□□□□ -0.32
TMEM55B-205ENST00000554028 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.32
TMEM55B-205ENST00000554028 PHF14O94880 888 aa13.07□□□□□ -0.32
TMEM55B-205ENST00000554028 CAMTA2O94983 1202 aa13.07□□□□□ -0.32
TMEM55B-205ENST00000554028 HSP90B1P14625 803 aaKnown RBP13.07□□□□□ -0.32
TMEM55B-205ENST00000554028 SSFA2P28290 1259 aa13.07□□□□□ -0.32
TMEM55B-205ENST00000554028 HDAC1Q13547 482 aaPredicted RBP13.07□□□□□ -0.32
TMEM55B-205ENST00000554028 HLFQ16534 295 aa13.07□□□□□ -0.32
TMEM55B-205ENST00000554028 PARP10Q53GL7 1025 aa13.07□□□□□ -0.32
TMEM55B-205ENST00000554028 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
TMEM55B-205ENST00000554028 TFCP2L1Q9NZI6 479 aa13.07□□□□□ -0.32
TMEM55B-205ENST00000554028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.06□□□□□ -0.32
TMEM55B-205ENST00000554028 NBPF7P0C2Y1 421 aaPredicted RBP13.06□□□□□ -0.32
TMEM55B-205ENST00000554028 GPTP24298 496 aa13.06□□□□□ -0.32
TMEM55B-205ENST00000554028 EN1Q05925 392 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms