RNA–Protein interactions for RNA: ENST00000553991.1

AF111169.3-201, humanhuman

TSL 5 BASIC

Gene AF111169.3, Length 756 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF111169.3-201ENST00000553991 SCN11AQ9UI33 1791 aa17.2■□□□□ 0.34
AF111169.3-201ENST00000553991 VIRMAQ69YN4 1812 aaKnown RBP17.2■□□□□ 0.34
AF111169.3-201ENST00000553991 SRGNP10124 158 aa17.2■□□□□ 0.34
AF111169.3-201ENST00000553991 PNMA8AQ86V59 439 aaPredicted RBP17.2■□□□□ 0.34
AF111169.3-201ENST00000553991 CCDC24Q8N4L8 307 aa17.2■□□□□ 0.34
AF111169.3-201ENST00000553991 CNBD1Q8NA66 436 aa17.2■□□□□ 0.34
AF111169.3-201ENST00000553991 MASTLQ96GX5 879 aa17.2■□□□□ 0.34
AF111169.3-201ENST00000553991 SCN4AP35499 1836 aa17.19■□□□□ 0.34
AF111169.3-201ENST00000553991 NPHP1O15259 732 aa17.19■□□□□ 0.34
AF111169.3-201ENST00000553991 EPHX2P34913 555 aa17.19■□□□□ 0.34
AF111169.3-201ENST00000553991 ST5P78524 1137 aa17.19■□□□□ 0.34
AF111169.3-201ENST00000553991 CNTROBQ8N137 903 aa17.19■□□□□ 0.34
AF111169.3-201ENST00000553991 ABT1Q9ULW3 272 aaKnown RBP17.19■□□□□ 0.34
AF111169.3-201ENST00000553991 ANKRD31Q8N7Z5 1873 aa17.18■□□□□ 0.34
AF111169.3-201ENST00000553991 CCDC93Q567U6 631 aa17.18■□□□□ 0.34
AF111169.3-201ENST00000553991 SETDB2Q96T68 719 aa17.18■□□□□ 0.34
AF111169.3-201ENST00000553991 BEGAINQ9BUH8 593 aa17.18■□□□□ 0.34
AF111169.3-201ENST00000553991 ZNF541Q9H0D2 1346 aa17.18■□□□□ 0.34
AF111169.3-201ENST00000553991 COL11A2P13942 1736 aaPredicted RBP17.17■□□□□ 0.34
AF111169.3-201ENST00000553991 IL13P35225 146 aa17.17■□□□□ 0.34
AF111169.3-201ENST00000553991 MAP1SQ66K74 1059 aaPredicted RBP17.17■□□□□ 0.34
AF111169.3-201ENST00000553991 C7orf43Q8WVR3 580 aa17.17■□□□□ 0.34
AF111169.3-201ENST00000553991 FKBP4Q02790 459 aaKnown RBP eCLIP17.16■□□□□ 0.34
AF111169.3-201ENST00000553991 CC2D1BQ5T0F9 858 aaKnown RBP17.16■□□□□ 0.34
AF111169.3-201ENST00000553991 TTC5Q8N0Z6 440 aa17.16■□□□□ 0.34
AF111169.3-201ENST00000553991 TBC1D2BQ9UPU7 963 aa17.16■□□□□ 0.34
AF111169.3-201ENST00000553991 ECE1P42892 770 aa17.15■□□□□ 0.34
AF111169.3-201ENST00000553991 TEX13AQ9BXU3 409 aaPredicted RBP17.15■□□□□ 0.34
AF111169.3-201ENST00000553991 ZNF277Q9NRM2 450 aaPredicted RBP17.15■□□□□ 0.34
AF111169.3-201ENST00000553991 SLX4Q8IY92 1834 aa17.14■□□□□ 0.34
AF111169.3-201ENST00000553991 IL6STP40189 918 aaPredicted RBP17.14■□□□□ 0.33
AF111169.3-201ENST00000553991 NPM2Q86SE8 214 aaKnown RBP17.14■□□□□ 0.33
AF111169.3-201ENST00000553991 CAPNS2Q96L46 248 aa17.14■□□□□ 0.33
AF111169.3-201ENST00000553991 DDX21Q9NR30 783 aaKnown RBP eCLIP17.14■□□□□ 0.33
AF111169.3-201ENST00000553991 ZNF330Q9Y3S2 320 aaPredicted RBP17.14■□□□□ 0.33
AF111169.3-201ENST00000553991 ADAMTSL1Q8N6G6 1762 aa17.14■□□□□ 0.33
AF111169.3-201ENST00000553991 RNF123Q5XPI4 1314 aa17.14■□□□□ 0.33
AF111169.3-201ENST00000553991 SCN7AQ01118 1682 aa17.13■□□□□ 0.33
AF111169.3-201ENST00000553991 FZD9O00144 591 aa17.13■□□□□ 0.33
AF111169.3-201ENST00000553991 CAMTA2O94983 1202 aa17.13■□□□□ 0.33
AF111169.3-201ENST00000553991 RTKN2Q8IZC4 609 aa17.13■□□□□ 0.33
AF111169.3-201ENST00000553991 NPR1P16066 1061 aa17.12■□□□□ 0.33
AF111169.3-201ENST00000553991 GPC2Q8N158 579 aa17.12■□□□□ 0.33
AF111169.3-201ENST00000553991 GPR101Q96P66 508 aaPredicted RBP17.12■□□□□ 0.33
AF111169.3-201ENST00000553991 PAXIP1Q6ZW49 1069 aaPredicted RBP17.11■□□□□ 0.33
AF111169.3-201ENST00000553991 ZNF496Q96IT1 587 aaPredicted RBP17.11■□□□□ 0.33
AF111169.3-201ENST00000553991 HEG1Q9ULI3 1381 aa17.11■□□□□ 0.33
AF111169.3-201ENST00000553991 COL3A1P02461 1466 aaPredicted RBP17.11■□□□□ 0.33
AF111169.3-201ENST00000553991 THSD7BQ9C0I4 1608 aa17.1■□□□□ 0.33
AF111169.3-201ENST00000553991 MTHFSDQ2M296 383 aaKnown RBP17.1■□□□□ 0.33
AF111169.3-201ENST00000553991 NBPF5PQ86XG9 351 aaPredicted RBP17.1■□□□□ 0.33
AF111169.3-201ENST00000553991 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
AF111169.3-201ENST00000553991 CA12O43570 354 aa17.09■□□□□ 0.33
AF111169.3-201ENST00000553991 ZEB1P37275 1124 aaPredicted RBP17.09■□□□□ 0.33
AF111169.3-201ENST00000553991 IARSP41252 1262 aaKnown RBP17.09■□□□□ 0.33
AF111169.3-201ENST00000553991 CYP4F22Q6NT55 531 aa17.09■□□□□ 0.33
AF111169.3-201ENST00000553991 ZNF790Q6PG37 636 aa17.09■□□□□ 0.33
AF111169.3-201ENST00000553991 UBR2Q8IWV8 1755 aa17.09■□□□□ 0.33
AF111169.3-201ENST00000553991 ARFGEF2Q9Y6D5 1785 aa17.09■□□□□ 0.33
AF111169.3-201ENST00000553991 MAP2K2P36507 400 aa17.08■□□□□ 0.32
AF111169.3-201ENST00000553991 CFAP44Q96MT7 982 aa17.08■□□□□ 0.32
AF111169.3-201ENST00000553991 DIAPH1O60610 1272 aaKnown RBP17.07■□□□□ 0.32
AF111169.3-201ENST00000553991 HMOX1P09601 288 aa17.07■□□□□ 0.32
AF111169.3-201ENST00000553991 LMOD1P29536 600 aaPredicted RBP17.07■□□□□ 0.32
AF111169.3-201ENST00000553991 GRM1Q13255 1194 aa17.07■□□□□ 0.32
AF111169.3-201ENST00000553991 CLEC4GQ6UXB4 293 aa17.07■□□□□ 0.32
AF111169.3-201ENST00000553991 DZIP3Q86Y13 1208 aaKnown RBP17.07■□□□□ 0.32
AF111169.3-201ENST00000553991 JDP2Q8WYK2 163 aa17.07■□□□□ 0.32
AF111169.3-201ENST00000553991 MCOLN1Q9GZU1 580 aa17.07■□□□□ 0.32
AF111169.3-201ENST00000553991 TLL2Q9Y6L7 1015 aa17.07■□□□□ 0.32
AF111169.3-201ENST00000553991 PDE4DIPQ5VU43 2346 aa17.07■□□□□ 0.32
AF111169.3-201ENST00000553991 A1BGP04217 495 aa17.06■□□□□ 0.32
AF111169.3-201ENST00000553991 OLFM4Q6UX06 510 aa17.06■□□□□ 0.32
AF111169.3-201ENST00000553991 SYNE4Q8N205 404 aa17.06■□□□□ 0.32
AF111169.3-201ENST00000553991 FMNL2Q96PY5 1086 aa17.06■□□□□ 0.32
AF111169.3-201ENST00000553991 TSKSQ9UJT2 592 aa17.06■□□□□ 0.32
AF111169.3-201ENST00000553991 EIF6P56537 245 aaKnown RBP17.05■□□□□ 0.32
AF111169.3-201ENST00000553991 TEFQ10587 303 aa17.05■□□□□ 0.32
AF111169.3-201ENST00000553991 CST9Q5W186 159 aa17.05■□□□□ 0.32
AF111169.3-201ENST00000553991 CFAP53Q96M91 514 aa17.05■□□□□ 0.32
AF111169.3-201ENST00000553991 PSMD1Q99460 953 aa17.05■□□□□ 0.32
AF111169.3-201ENST00000553991 ZNF652Q9Y2D9 606 aa17.05■□□□□ 0.32
AF111169.3-201ENST00000553991 TNRC18O15417 2968 aaPredicted RBP17.04■□□□□ 0.32
AF111169.3-201ENST00000553991 ALDH1B1P30837 517 aa17.04■□□□□ 0.32
AF111169.3-201ENST00000553991 TPTE2Q6XPS3 522 aa17.04■□□□□ 0.32
AF111169.3-201ENST00000553991 GJA3Q9Y6H8 435 aa17.04■□□□□ 0.32
AF111169.3-201ENST00000553991 AOC2O75106 756 aa17.03■□□□□ 0.32
AF111169.3-201ENST00000553991 FMR1Q06787 632 aaKnown RBP eCLIP17.03■□□□□ 0.32
AF111169.3-201ENST00000553991 USP50Q70EL3 339 aaPredicted RBP17.03■□□□□ 0.32
AF111169.3-201ENST00000553991 CACNA1SQ13698 1873 aa17.03■□□□□ 0.32
AF111169.3-201ENST00000553991 TRAF5O00463 557 aa17.02■□□□□ 0.32
AF111169.3-201ENST00000553991 RGL2O15211 777 aa17.02■□□□□ 0.32
AF111169.3-201ENST00000553991 SCNN1DP51172 638 aa17.02■□□□□ 0.32
AF111169.3-201ENST00000553991 EPS15P42566 896 aa17.01■□□□□ 0.31
AF111169.3-201ENST00000553991 BRPF1P55201 1214 aaPredicted RBP17.01■□□□□ 0.31
AF111169.3-201ENST00000553991 DGKZQ13574 1117 aa17.01■□□□□ 0.31
AF111169.3-201ENST00000553991 CNGB1Q14028 1251 aaPredicted RBP17.01■□□□□ 0.31
AF111169.3-201ENST00000553991 CC2D2BQ6DHV5 1058 aa17.01■□□□□ 0.31
AF111169.3-201ENST00000553991 IL17REQ8NFR9 667 aa17.01■□□□□ 0.31
AF111169.3-201ENST00000553991 HHIPL1Q96JK4 782 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms