RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 SOX11P35716 441 aa6.09□□□□□ -1.43
SRP54-204ENST00000553923 C20orf204Q6ZNR8 217 aa6.09□□□□□ -1.43
SRP54-204ENST00000553923 BICDL1Q6ZP65 573 aa6.09□□□□□ -1.43
SRP54-204ENST00000553923 MICALL1Q8N3F8 863 aa6.09□□□□□ -1.43
SRP54-204ENST00000553923 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.09□□□□□ -1.43
SRP54-204ENST00000553923 ZNF358Q9NW07 568 aa6.09□□□□□ -1.43
SRP54-204ENST00000553923 SPDYE3A6NKU9 549 aa6.08□□□□□ -1.44
SRP54-204ENST00000553923 FAM229AH3BQW9 127 aa6.08□□□□□ -1.44
SRP54-204ENST00000553923 M0R082 166 aa6.08□□□□□ -1.44
SRP54-204ENST00000553923 BACH1O14867 736 aa6.08□□□□□ -1.44
SRP54-204ENST00000553923 ABL2P42684 1182 aa6.08□□□□□ -1.44
SRP54-204ENST00000553923 SEMA3FQ13275 785 aa6.08□□□□□ -1.44
SRP54-204ENST00000553923 PRRT3Q5FWE3 981 aa6.08□□□□□ -1.44
SRP54-204ENST00000553923 LRRC69Q6ZNQ3 347 aa6.08□□□□□ -1.44
SRP54-204ENST00000553923 ZNF417Q8TAU3 575 aa6.08□□□□□ -1.44
SRP54-204ENST00000553923 ZNF587Q96SQ5 575 aaPredicted RBP6.08□□□□□ -1.44
SRP54-204ENST00000553923 GPC6Q9Y625 555 aaPredicted RBP6.08□□□□□ -1.44
SRP54-204ENST00000553923 ALBP02768 609 aa6.07□□□□□ -1.44
SRP54-204ENST00000553923 GTF2IP78347 998 aa6.07□□□□□ -1.44
SRP54-204ENST00000553923 SH3PXD2AQ5TCZ1 1133 aa6.07□□□□□ -1.44
SRP54-204ENST00000553923 POTEAQ6S8J7 498 aa6.07□□□□□ -1.44
SRP54-204ENST00000553923 KRTAP1-3Q8IUG1 177 aa6.07□□□□□ -1.44
SRP54-204ENST00000553923 KRTAP4-12Q9BQ66 201 aa6.07□□□□□ -1.44
SRP54-204ENST00000553923 ALG2Q9H553 416 aa6.07□□□□□ -1.44
SRP54-204ENST00000553923 LZTS3O60299 673 aaPredicted RBP6.06□□□□□ -1.44
SRP54-204ENST00000553923 GRIK4Q16099 956 aa6.06□□□□□ -1.44
SRP54-204ENST00000553923 EML3Q32P44 896 aa6.06□□□□□ -1.44
SRP54-204ENST00000553923 ARTNQ5T4W7 220 aa6.06□□□□□ -1.44
SRP54-204ENST00000553923 ILDR2Q71H61 639 aa6.06□□□□□ -1.44
SRP54-204ENST00000553923 NOD1Q9Y239 953 aa6.06□□□□□ -1.44
SRP54-204ENST00000553923 APBA3O96018 575 aa6.05□□□□□ -1.44
SRP54-204ENST00000553923 KCNQ4P56696 695 aa6.05□□□□□ -1.44
SRP54-204ENST00000553923 PRSS36Q5K4E3 855 aa6.05□□□□□ -1.44
SRP54-204ENST00000553923 TBCELQ5QJ74 424 aa6.05□□□□□ -1.44
SRP54-204ENST00000553923 SLC9A9Q8IVB4 645 aa6.05□□□□□ -1.44
SRP54-204ENST00000553923 TNS4Q8IZW8 715 aa6.05□□□□□ -1.44
SRP54-204ENST00000553923 NFATC2IPQ8NCF5 419 aa6.05□□□□□ -1.44
SRP54-204ENST00000553923 ZBTB7BO15156 539 aaPredicted RBP6.04□□□□□ -1.44
SRP54-204ENST00000553923 SKIP12755 728 aa6.04□□□□□ -1.44
SRP54-204ENST00000553923 SPEM2Q0P670 501 aa6.04□□□□□ -1.44
SRP54-204ENST00000553923 TRIM28Q13263 835 aaKnown RBP6.04□□□□□ -1.44
SRP54-204ENST00000553923 NCOA4Q13772 614 aa6.04□□□□□ -1.44
SRP54-204ENST00000553923 ADGRE1Q14246 886 aa6.04□□□□□ -1.44
SRP54-204ENST00000553923 SERTM1A2A2V5 107 aa6.03□□□□□ -1.44
SRP54-204ENST00000553923 SELPP16109 830 aa6.03□□□□□ -1.44
SRP54-204ENST00000553923 ADH7P40394 386 aa6.03□□□□□ -1.44
SRP54-204ENST00000553923 C1orf53Q5VUE5 145 aa6.03□□□□□ -1.44
SRP54-204ENST00000553923 NACC1Q96RE7 527 aa6.03□□□□□ -1.44
SRP54-204ENST00000553923 ZFP64Q9NPA5 681 aa6.03□□□□□ -1.44
SRP54-204ENST00000553923 H2AFB1P0C5Y9 115 aa6.02□□□□□ -1.45
SRP54-204ENST00000553923 H2AFB2P0C5Z0 115 aa6.02□□□□□ -1.45
SRP54-204ENST00000553923 HIRAP54198 1017 aaPredicted RBP6.02□□□□□ -1.45
SRP54-204ENST00000553923 MCM6Q14566 821 aa6.02□□□□□ -1.45
SRP54-204ENST00000553923 RAB44Q7Z6P3 723 aaPredicted RBP6.02□□□□□ -1.45
SRP54-204ENST00000553923 KIAA1024Q9UPX6 916 aa6.02□□□□□ -1.45
SRP54-204ENST00000553923 SCO2A0A1W2PP80 73 aa6.01□□□□□ -1.45
SRP54-204ENST00000553923 C9orf172C9J069 976 aa6.01□□□□□ -1.45
SRP54-204ENST00000553923 TYRO3Q06418 890 aa6.01□□□□□ -1.45
SRP54-204ENST00000553923 MBTPS1Q14703 1052 aa6.01□□□□□ -1.45
SRP54-204ENST00000553923 ZNF280CQ8ND82 737 aa6.01□□□□□ -1.45
SRP54-204ENST00000553923 RHPN1Q8TCX5 695 aa6.01□□□□□ -1.45
SRP54-204ENST00000553923 HSH2DQ96JZ2 352 aa6.01□□□□□ -1.45
SRP54-204ENST00000553923 NEUROD4Q9HD90 331 aa6.01□□□□□ -1.45
SRP54-204ENST00000553923 BRD7Q9NPI1 651 aa6.01□□□□□ -1.45
SRP54-204ENST00000553923 ZNF232Q9UNY5 417 aa6.01□□□□□ -1.45
SRP54-204ENST00000553923 COG6Q9Y2V7 657 aa6.01□□□□□ -1.45
SRP54-204ENST00000553923 A0A0A0MRY4 1105 aa6□□□□□ -1.45
SRP54-204ENST00000553923 SUSD3Q96L08 255 aa6□□□□□ -1.45
SRP54-204ENST00000553923 SSBP4Q9BWG4 385 aaPredicted RBP6□□□□□ -1.45
SRP54-204ENST00000553923 TSPAN10Q9H1Z9 355 aaPredicted RBP6□□□□□ -1.45
SRP54-204ENST00000553923 KCNH4Q9UQ05 1017 aa6□□□□□ -1.45
SRP54-204ENST00000553923 SFI1A8K8P3 1242 aa5.99□□□□□ -1.45
SRP54-204ENST00000553923 USP17L5A8MUK1 530 aa5.99□□□□□ -1.45
SRP54-204ENST00000553923 DKK1O94907 266 aa5.99□□□□□ -1.45
SRP54-204ENST00000553923 PSMA6P60900 246 aaKnown RBP5.99□□□□□ -1.45
SRP54-204ENST00000553923 CLDN10P78369 228 aa5.99□□□□□ -1.45
SRP54-204ENST00000553923 PSME1Q06323 249 aa5.99□□□□□ -1.45
SRP54-204ENST00000553923 TRAPPC3LQ5T215 181 aa5.99□□□□□ -1.45
SRP54-204ENST00000553923 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
SRP54-204ENST00000553923 DEPDC4Q8N2C3 294 aa5.99□□□□□ -1.45
SRP54-204ENST00000553923 LENG1Q96BZ8 264 aaPredicted RBP5.99□□□□□ -1.45
SRP54-204ENST00000553923 CEP63Q96MT8 703 aa5.99□□□□□ -1.45
SRP54-204ENST00000553923 PHACTR1Q9C0D0 580 aa5.99□□□□□ -1.45
SRP54-204ENST00000553923 HCN4Q9Y3Q4 1203 aa5.99□□□□□ -1.45
SRP54-204ENST00000553923 C21orf2O43822 256 aa5.98□□□□□ -1.45
SRP54-204ENST00000553923 LILRB5O75023 590 aa5.98□□□□□ -1.45
SRP54-204ENST00000553923 ELNP15502 786 aa5.98□□□□□ -1.45
SRP54-204ENST00000553923 NEUROD1Q13562 356 aa5.98□□□□□ -1.45
SRP54-204ENST00000553923 TXNRD3Q86VQ6 643 aa5.98□□□□□ -1.45
SRP54-204ENST00000553923 ANKIB1Q9P2G1 1089 aa5.98□□□□□ -1.45
SRP54-204ENST00000553923 M0R2N6 131 aa5.97□□□□□ -1.45
SRP54-204ENST00000553923 AFF1P51825 1210 aaKnown RBP5.97□□□□□ -1.45
SRP54-204ENST00000553923 LRP8Q14114 963 aa5.97□□□□□ -1.45
SRP54-204ENST00000553923 CCDC102BQ68D86 513 aa5.97□□□□□ -1.45
SRP54-204ENST00000553923 SHISA2Q6UWI4 295 aa5.97□□□□□ -1.45
SRP54-204ENST00000553923 PLEKHM2Q8IWE5 1019 aa5.97□□□□□ -1.45
SRP54-204ENST00000553923 TPCN2Q8NHX9 752 aa5.97□□□□□ -1.45
SRP54-204ENST00000553923 ADAMTS19Q8TE59 1207 aa5.97□□□□□ -1.45
SRP54-204ENST00000553923 BHMTQ93088 406 aa5.97□□□□□ -1.45
SRP54-204ENST00000553923 HYAL3O43820 417 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms