RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 A0A087WZG4 1122 aa12.44□□□□□ -0.42
PRKCH-208ENST00000553846 MTHFSDQ2M296 383 aaKnown RBP12.44□□□□□ -0.42
PRKCH-208ENST00000553846 CNKSR1Q969H4 720 aa12.44□□□□□ -0.42
PRKCH-208ENST00000553846 ZNF496Q96IT1 587 aaPredicted RBP12.44□□□□□ -0.42
PRKCH-208ENST00000553846 COL3A1P02461 1466 aaPredicted RBP12.44□□□□□ -0.42
PRKCH-208ENST00000553846 WDR33Q9C0J8 1336 aaKnown RBP12.43□□□□□ -0.42
PRKCH-208ENST00000553846 PDE4DIPQ5VU43 2346 aa12.43□□□□□ -0.42
PRKCH-208ENST00000553846 IL6STP40189 918 aaPredicted RBP12.43□□□□□ -0.42
PRKCH-208ENST00000553846 SOGA3Q5TF21 947 aa12.43□□□□□ -0.42
PRKCH-208ENST00000553846 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
PRKCH-208ENST00000553846 MASTLQ96GX5 879 aa12.43□□□□□ -0.42
PRKCH-208ENST00000553846 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
PRKCH-208ENST00000553846 FZD9O00144 591 aa12.42□□□□□ -0.42
PRKCH-208ENST00000553846 STARD3NLO95772 234 aa12.42□□□□□ -0.42
PRKCH-208ENST00000553846 EPHX2P34913 555 aa12.42□□□□□ -0.42
PRKCH-208ENST00000553846 OLFM4Q6UX06 510 aa12.42□□□□□ -0.42
PRKCH-208ENST00000553846 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
PRKCH-208ENST00000553846 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
PRKCH-208ENST00000553846 TRPM7Q96QT4 1865 aa12.42□□□□□ -0.42
PRKCH-208ENST00000553846 CEMIPQ8WUJ3 1361 aa12.42□□□□□ -0.42
PRKCH-208ENST00000553846 MAP2K1Q02750 393 aaPredicted RBP12.41□□□□□ -0.42
PRKCH-208ENST00000553846 FKBP4Q02790 459 aaKnown RBP eCLIP12.41□□□□□ -0.42
PRKCH-208ENST00000553846 CCDC93Q567U6 631 aa12.41□□□□□ -0.42
PRKCH-208ENST00000553846 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
PRKCH-208ENST00000553846 MAP1SQ66K74 1059 aaPredicted RBP12.41□□□□□ -0.42
PRKCH-208ENST00000553846 ZNF790Q6PG37 636 aa12.41□□□□□ -0.42
PRKCH-208ENST00000553846 MORC1Q86VD1 984 aa12.41□□□□□ -0.42
PRKCH-208ENST00000553846 CNTROBQ8N137 903 aa12.41□□□□□ -0.42
PRKCH-208ENST00000553846 ZNF277Q9NRM2 450 aaPredicted RBP12.41□□□□□ -0.42
PRKCH-208ENST00000553846 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.42
PRKCH-208ENST00000553846 HMOX1P09601 288 aa12.4□□□□□ -0.42
PRKCH-208ENST00000553846 DEFB115Q30KQ5 88 aa12.4□□□□□ -0.42
PRKCH-208ENST00000553846 IL17REQ8NFR9 667 aa12.4□□□□□ -0.42
PRKCH-208ENST00000553846 A1BGP04217 495 aa12.39□□□□□ -0.43
PRKCH-208ENST00000553846 MLLT1Q03111 559 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-208ENST00000553846 FMR1Q06787 632 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRKCH-208ENST00000553846 EAPPQ56P03 285 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-208ENST00000553846 PNMA8AQ86V59 439 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-208ENST00000553846 SETDB2Q96T68 719 aa12.39□□□□□ -0.43
PRKCH-208ENST00000553846 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRKCH-208ENST00000553846 NPR1P16066 1061 aa12.38□□□□□ -0.43
PRKCH-208ENST00000553846 ST5P78524 1137 aa12.38□□□□□ -0.43
PRKCH-208ENST00000553846 GPC2Q8N158 579 aa12.38□□□□□ -0.43
PRKCH-208ENST00000553846 SCNN1DP51172 638 aa12.37□□□□□ -0.43
PRKCH-208ENST00000553846 CST9Q5W186 159 aa12.37□□□□□ -0.43
PRKCH-208ENST00000553846 CAPNS2Q96L46 248 aa12.37□□□□□ -0.43
PRKCH-208ENST00000553846 TEX13AQ9BXU3 409 aaPredicted RBP12.37□□□□□ -0.43
PRKCH-208ENST00000553846 RGL2O15211 777 aa12.36□□□□□ -0.43
PRKCH-208ENST00000553846 KCNQ3O43525 872 aa12.36□□□□□ -0.43
PRKCH-208ENST00000553846 IARSP41252 1262 aaKnown RBP12.36□□□□□ -0.43
PRKCH-208ENST00000553846 CRY2Q49AN0 593 aa12.36□□□□□ -0.43
PRKCH-208ENST00000553846 CLEC4GQ6UXB4 293 aa12.36□□□□□ -0.43
PRKCH-208ENST00000553846 DZIP3Q86Y13 1208 aaKnown RBP12.36□□□□□ -0.43
PRKCH-208ENST00000553846 TTC5Q8N0Z6 440 aa12.36□□□□□ -0.43
PRKCH-208ENST00000553846 PSMD1Q99460 953 aa12.36□□□□□ -0.43
PRKCH-208ENST00000553846 TIMELESSQ9UNS1 1208 aa12.36□□□□□ -0.43
PRKCH-208ENST00000553846 RIC1Q4ADV7 1423 aa12.36□□□□□ -0.43
PRKCH-208ENST00000553846 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
PRKCH-208ENST00000553846 SLC51AQ86UW1 340 aa12.35□□□□□ -0.43
PRKCH-208ENST00000553846 RTKN2Q8IZC4 609 aa12.35□□□□□ -0.43
PRKCH-208ENST00000553846 POLR3GLQ9BT43 218 aa12.35□□□□□ -0.43
PRKCH-208ENST00000553846 CASP8AP2Q9UKL3 1982 aa12.34□□□□□ -0.43
PRKCH-208ENST00000553846 LAMB4A4D0S4 1761 aa12.34□□□□□ -0.43
PRKCH-208ENST00000553846 PRAMEF22A3QJZ6 481 aa12.34□□□□□ -0.43
PRKCH-208ENST00000553846 CYP4F22Q6NT55 531 aa12.34□□□□□ -0.43
PRKCH-208ENST00000553846 NBPF5PQ86XG9 351 aaPredicted RBP12.34□□□□□ -0.43
PRKCH-208ENST00000553846 FMNL2Q96PY5 1086 aa12.34□□□□□ -0.43
PRKCH-208ENST00000553846 ABT1Q9ULW3 272 aaKnown RBP12.34□□□□□ -0.43
PRKCH-208ENST00000553846 ZNF330Q9Y3S2 320 aaPredicted RBP12.34□□□□□ -0.43
PRKCH-208ENST00000553846 USP16Q9Y5T5 823 aa12.34□□□□□ -0.43
PRKCH-208ENST00000553846 TLL2Q9Y6L7 1015 aa12.34□□□□□ -0.43
PRKCH-208ENST00000553846 CCDC85CA6NKD9 419 aa12.33□□□□□ -0.44
PRKCH-208ENST00000553846 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
PRKCH-208ENST00000553846 TRAF5O00463 557 aa12.33□□□□□ -0.44
PRKCH-208ENST00000553846 HSPA5P11021 654 aaKnown RBP12.33□□□□□ -0.44
PRKCH-208ENST00000553846 PIP4K2AP48426 406 aaPredicted RBP12.33□□□□□ -0.44
PRKCH-208ENST00000553846 NBPF10Q6P3W6 841 aaKnown RBP12.33□□□□□ -0.44
PRKCH-208ENST00000553846 SYNE4Q8N205 404 aa12.33□□□□□ -0.44
PRKCH-208ENST00000553846 NBPF15Q8N660 670 aa12.33□□□□□ -0.44
PRKCH-208ENST00000553846 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
PRKCH-208ENST00000553846 CLEC11AQ9Y240 323 aa12.33□□□□□ -0.44
PRKCH-208ENST00000553846 GNAT3A8MTJ3 354 aa12.32□□□□□ -0.44
PRKCH-208ENST00000553846 EPS15P42566 896 aa12.32□□□□□ -0.44
PRKCH-208ENST00000553846 ECE1P42892 770 aa12.32□□□□□ -0.44
PRKCH-208ENST00000553846 TEFQ10587 303 aa12.32□□□□□ -0.44
PRKCH-208ENST00000553846 MCOLN1Q9GZU1 580 aa12.32□□□□□ -0.44
PRKCH-208ENST00000553846 TSKSQ9UJT2 592 aa12.32□□□□□ -0.44
PRKCH-208ENST00000553846 PER1O15534 1290 aaPredicted RBP12.31□□□□□ -0.44
PRKCH-208ENST00000553846 DIAPH1O60610 1272 aaKnown RBP12.31□□□□□ -0.44
PRKCH-208ENST00000553846 AOC2O75106 756 aa12.31□□□□□ -0.44
PRKCH-208ENST00000553846 MAP2K2P36507 400 aa12.31□□□□□ -0.44
PRKCH-208ENST00000553846 SAPCD2Q86UD0 394 aa12.31□□□□□ -0.44
PRKCH-208ENST00000553846 KNSTRNQ9Y448 316 aa12.31□□□□□ -0.44
PRKCH-208ENST00000553846 NUP98P52948 1817 aa12.3□□□□□ -0.44
PRKCH-208ENST00000553846 MKI67P46013 3256 aaKnown RBP12.3□□□□□ -0.44
PRKCH-208ENST00000553846 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-208ENST00000553846 EIF4G2P78344 907 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRKCH-208ENST00000553846 HLFQ16534 295 aa12.3□□□□□ -0.44
PRKCH-208ENST00000553846 USP50Q70EL3 339 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-208ENST00000553846 GAS2L2Q8NHY3 880 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms