RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 RSPH6AQ9H0K4 717 aa21.03■□□□□ 0.96
ACTN1-209ENST00000553659 COL11A2P13942 1736 aaPredicted RBP21.03■□□□□ 0.96
ACTN1-209ENST00000553659 CACNA1SQ13698 1873 aa21.03■□□□□ 0.96
ACTN1-209ENST00000553659 CAMTA2O94983 1202 aa21.02■□□□□ 0.96
ACTN1-209ENST00000553659 JMYQ8N9B5 988 aa21.02■□□□□ 0.96
ACTN1-209ENST00000553659 SETDB2Q96T68 719 aa21.02■□□□□ 0.96
ACTN1-209ENST00000553659 BCORQ6W2J9 1755 aa21.02■□□□□ 0.96
ACTN1-209ENST00000553659 CCDC24Q8N4L8 307 aa21.01■□□□□ 0.95
ACTN1-209ENST00000553659 NUDCQ9Y266 331 aa21.01■□□□□ 0.95
ACTN1-209ENST00000553659 SLX4Q8IY92 1834 aa21■□□□□ 0.95
ACTN1-209ENST00000553659 C21orf2O43822 256 aa21■□□□□ 0.95
ACTN1-209ENST00000553659 DPY19L2Q6NUT2 758 aa21■□□□□ 0.95
ACTN1-209ENST00000553659 USP16Q9Y5T5 823 aa21■□□□□ 0.95
ACTN1-209ENST00000553659 DZIP3Q86Y13 1208 aaKnown RBP20.99■□□□□ 0.95
ACTN1-209ENST00000553659 CNBD1Q8NA66 436 aa20.99■□□□□ 0.95
ACTN1-209ENST00000553659 ARFGEF2Q9Y6D5 1785 aa20.98■□□□□ 0.95
ACTN1-209ENST00000553659 NPHP1O15259 732 aa20.98■□□□□ 0.95
ACTN1-209ENST00000553659 CNKSR1Q969H4 720 aa20.98■□□□□ 0.95
ACTN1-209ENST00000553659 ZNF219Q9P2Y4 722 aaPredicted RBP20.98■□□□□ 0.95
ACTN1-209ENST00000553659 POTECB2RU33 542 aa20.97■□□□□ 0.95
ACTN1-209ENST00000553659 NEFLP07196 543 aa20.97■□□□□ 0.95
ACTN1-209ENST00000553659 ST5P78524 1137 aa20.97■□□□□ 0.95
ACTN1-209ENST00000553659 ERFEQ4G0M1 354 aa20.97■□□□□ 0.95
ACTN1-209ENST00000553659 STYK1Q6J9G0 422 aa20.97■□□□□ 0.95
ACTN1-209ENST00000553659 RTF1Q92541 710 aaKnown RBP20.97■□□□□ 0.95
ACTN1-209ENST00000553659 SNRPA1P09661 255 aaKnown RBP20.96■□□□□ 0.95
ACTN1-209ENST00000553659 U2AF1L5P0DN76 240 aaPredicted RBP20.96■□□□□ 0.95
ACTN1-209ENST00000553659 SRGNP10124 158 aa20.96■□□□□ 0.95
ACTN1-209ENST00000553659 U2AF1Q01081 240 aaKnown RBP eCLIP20.96■□□□□ 0.95
ACTN1-209ENST00000553659 CLEC4GQ6UXB4 293 aa20.96■□□□□ 0.95
ACTN1-209ENST00000553659 LTBP3Q9NS15 1303 aa20.96■□□□□ 0.95
ACTN1-209ENST00000553659 PRAMEF22A3QJZ6 481 aa20.95■□□□□ 0.94
ACTN1-209ENST00000553659 PPP2R1AP30153 589 aa20.95■□□□□ 0.94
ACTN1-209ENST00000553659 PIP4K2AP48426 406 aaPredicted RBP20.95■□□□□ 0.94
ACTN1-209ENST00000553659 MCM10Q7L590 875 aa20.95■□□□□ 0.94
ACTN1-209ENST00000553659 MASTLQ96GX5 879 aa20.95■□□□□ 0.94
ACTN1-209ENST00000553659 TAOK3Q9H2K8 898 aa20.94■□□□□ 0.94
ACTN1-209ENST00000553659 HTATSF1O43719 755 aaKnown RBP20.93■□□□□ 0.94
ACTN1-209ENST00000553659 SOGA3Q5TF21 947 aa20.93■□□□□ 0.94
ACTN1-209ENST00000553659 PRPF40BQ6NWY9 871 aaKnown RBP20.93■□□□□ 0.94
ACTN1-209ENST00000553659 ZNF652Q9Y2D9 606 aa20.93■□□□□ 0.94
ACTN1-209ENST00000553659 NBPF5PQ86XG9 351 aaPredicted RBP20.92■□□□□ 0.94
ACTN1-209ENST00000553659 RGL2O15211 777 aa20.91■□□□□ 0.94
ACTN1-209ENST00000553659 DLG5Q8TDM6 1919 aa20.9■□□□□ 0.94
ACTN1-209ENST00000553659 DCTN1Q14203 1278 aa20.9■□□□□ 0.94
ACTN1-209ENST00000553659 NBPF26B4DH59 902 aa20.89■□□□□ 0.93
ACTN1-209ENST00000553659 TAF7Q15545 349 aaPredicted RBP20.89■□□□□ 0.93
ACTN1-209ENST00000553659 NBPF10Q6P3W6 841 aaKnown RBP20.89■□□□□ 0.93
ACTN1-209ENST00000553659 TPTE2Q6XPS3 522 aa20.89■□□□□ 0.93
ACTN1-209ENST00000553659 NBPF15Q8N660 670 aa20.89■□□□□ 0.93
ACTN1-209ENST00000553659 C7orf43Q8WVR3 580 aa20.89■□□□□ 0.93
ACTN1-209ENST00000553659 KLRG2A4D1S0 409 aaPredicted RBP20.88■□□□□ 0.93
ACTN1-209ENST00000553659 DDNO94850 711 aaPredicted RBP20.88■□□□□ 0.93
ACTN1-209ENST00000553659 NPR1P16066 1061 aa20.88■□□□□ 0.93
ACTN1-209ENST00000553659 COL13A1Q5TAT6 717 aaPredicted RBP20.88■□□□□ 0.93
ACTN1-209ENST00000553659 NIP7Q9Y221 180 aaKnown RBP eCLIP20.88■□□□□ 0.93
ACTN1-209ENST00000553659 SCN4AP35499 1836 aa20.87■□□□□ 0.93
ACTN1-209ENST00000553659 CCDC93Q567U6 631 aa20.86■□□□□ 0.93
ACTN1-209ENST00000553659 SUPT16HQ9Y5B9 1047 aaKnown RBP20.86■□□□□ 0.93
ACTN1-209ENST00000553659 LAMB4A4D0S4 1761 aa20.86■□□□□ 0.93
ACTN1-209ENST00000553659 NUP98P52948 1817 aa20.85■□□□□ 0.93
ACTN1-209ENST00000553659 CHADLQ6NUI6 762 aa20.85■□□□□ 0.93
ACTN1-209ENST00000553659 ERICH6BQ5W0A0 696 aa20.84■□□□□ 0.93
ACTN1-209ENST00000553659 MIS18AQ9NYP9 233 aa20.84■□□□□ 0.93
ACTN1-209ENST00000553659 KDM3BQ7LBC6 1761 aa20.83■□□□□ 0.93
ACTN1-209ENST00000553659 NEFMP07197 916 aa20.83■□□□□ 0.93
ACTN1-209ENST00000553659 FKBP4Q02790 459 aaKnown RBP eCLIP20.83■□□□□ 0.93
ACTN1-209ENST00000553659 WDR43Q15061 677 aaKnown RBP eCLIP20.83■□□□□ 0.93
ACTN1-209ENST00000553659 HLFQ16534 295 aa20.83■□□□□ 0.93
ACTN1-209ENST00000553659 IQCA1LA6NCM1 817 aa20.82■□□□□ 0.92
ACTN1-209ENST00000553659 FAM177BA6PVY3 158 aa20.82■□□□□ 0.92
ACTN1-209ENST00000553659 RTKN2Q8IZC4 609 aa20.82■□□□□ 0.92
ACTN1-209ENST00000553659 L3MBTL3Q96JM7 780 aaPredicted RBP20.82■□□□□ 0.92
ACTN1-209ENST00000553659 POTEIP0CG38 1075 aa20.81■□□□□ 0.92
ACTN1-209ENST00000553659 POTEJP0CG39 1038 aa20.81■□□□□ 0.92
ACTN1-209ENST00000553659 HSPA1AP0DMV8 641 aaKnown RBP20.81■□□□□ 0.92
ACTN1-209ENST00000553659 HSPA1BP0DMV9 641 aaKnown RBP20.81■□□□□ 0.92
ACTN1-209ENST00000553659 GTF2E1P29083 439 aaPredicted RBP20.81■□□□□ 0.92
ACTN1-209ENST00000553659 ALDH1B1P30837 517 aa20.81■□□□□ 0.92
ACTN1-209ENST00000553659 CREBZFQ9NS37 354 aa20.81■□□□□ 0.92
ACTN1-209ENST00000553659 ERVV-1B6SEH8 477 aa20.79■□□□□ 0.92
ACTN1-209ENST00000553659 OLFM4Q6UX06 510 aa20.79■□□□□ 0.92
ACTN1-209ENST00000553659 TAF1DQ9H5J8 278 aaPredicted RBP20.79■□□□□ 0.92
ACTN1-209ENST00000553659 ZNF277Q9NRM2 450 aaPredicted RBP20.79■□□□□ 0.92
ACTN1-209ENST00000553659 LDHDQ86WU2 507 aa20.78■□□□□ 0.92
ACTN1-209ENST00000553659 TNS4Q8IZW8 715 aa20.78■□□□□ 0.92
ACTN1-209ENST00000553659 NGEFQ8N5V2 710 aa20.78■□□□□ 0.92
ACTN1-209ENST00000553659 PLEKHF1Q96S99 279 aa20.78■□□□□ 0.92
ACTN1-209ENST00000553659 NYXQ9GZU5 481 aa20.78■□□□□ 0.92
ACTN1-209ENST00000553659 EIF4A1P60842 406 aaKnown RBP20.77■□□□□ 0.92
ACTN1-209ENST00000553659 MAP3K15Q6ZN16 1313 aa20.77■□□□□ 0.91
ACTN1-209ENST00000553659 CRY2Q49AN0 593 aa20.76■□□□□ 0.91
ACTN1-209ENST00000553659 SYNE4Q8N205 404 aa20.76■□□□□ 0.91
ACTN1-209ENST00000553659 RRP7AQ9Y3A4 280 aaKnown RBP20.76■□□□□ 0.91
ACTN1-209ENST00000553659 PASKQ96RG2 1323 aa20.76■□□□□ 0.91
ACTN1-209ENST00000553659 ZNF541Q9H0D2 1346 aa20.76■□□□□ 0.91
ACTN1-209ENST00000553659 PCNTO95613 3336 aa20.75■□□□□ 0.91
ACTN1-209ENST00000553659 IARSP41252 1262 aaKnown RBP20.75■□□□□ 0.91
ACTN1-209ENST00000553659 NFE2L2Q16236 605 aa20.75■□□□□ 0.91
ACTN1-209ENST00000553659 NUTM1Q86Y26 1132 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms