RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 PDGFAP04085 211 aa6.15□□□□□ -1.42
TDP1-207ENST00000553617 ZAP70P43403 619 aa6.15□□□□□ -1.42
TDP1-207ENST00000553617 HDLBPQ00341 1268 aaKnown RBP6.15□□□□□ -1.42
TDP1-207ENST00000553617 DGKZQ13574 1117 aa6.15□□□□□ -1.42
TDP1-207ENST00000553617 C1orf53Q5VUE5 145 aa6.15□□□□□ -1.42
TDP1-207ENST00000553617 SETDB2Q96T68 719 aa6.15□□□□□ -1.42
TDP1-207ENST00000553617 PHACTR1Q9C0D0 580 aa6.15□□□□□ -1.42
TDP1-207ENST00000553617 KLK14Q9P0G3 267 aa6.15□□□□□ -1.42
TDP1-207ENST00000553617 HCN4Q9Y3Q4 1203 aa6.15□□□□□ -1.42
TDP1-207ENST00000553617 POTECB2RU33 542 aa6.14□□□□□ -1.43
TDP1-207ENST00000553617 USP5P45974 858 aa6.14□□□□□ -1.43
TDP1-207ENST00000553617 RHBDD1Q8TEB9 315 aa6.14□□□□□ -1.43
TDP1-207ENST00000553617 C7orf43Q8WVR3 580 aa6.14□□□□□ -1.43
TDP1-207ENST00000553617 SREK1Q8WXA9 508 aaKnown RBP6.14□□□□□ -1.43
TDP1-207ENST00000553617 EDEM1Q92611 657 aa6.14□□□□□ -1.43
TDP1-207ENST00000553617 AGBL1Q96MI9 1066 aa6.14□□□□□ -1.43
TDP1-207ENST00000553617 FAM161BQ96MY7 647 aa6.14□□□□□ -1.43
TDP1-207ENST00000553617 ZSCAN10Q96SZ4 725 aaPredicted RBP6.14□□□□□ -1.43
TDP1-207ENST00000553617 CFHR5Q9BXR6 569 aa6.14□□□□□ -1.43
TDP1-207ENST00000553617 NIFKQ9BYG3 293 aaKnown RBP6.14□□□□□ -1.43
TDP1-207ENST00000553617 NIF3L1Q9GZT8 377 aa6.14□□□□□ -1.43
TDP1-207ENST00000553617 ZNF232Q9UNY5 417 aa6.14□□□□□ -1.43
TDP1-207ENST00000553617 PARP3Q9Y6F1 533 aa6.14□□□□□ -1.43
TDP1-207ENST00000553617 PNMA6FA0A0J9YX94 578 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 FAM187AA6NFU0 413 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 J3QL48 77 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 TNFRSF10AO00220 468 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 MEN1O00255 615 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 ZIC2O95409 532 aaPredicted RBP6.13□□□□□ -1.43
TDP1-207ENST00000553617 TIMP2P16035 220 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 ATP2B2Q01814 1243 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 XPCQ01831 940 aaPredicted RBP6.13□□□□□ -1.43
TDP1-207ENST00000553617 RAD51AP2Q09MP3 1159 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 ALG1LQ6GMV1 187 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 METTL16Q86W50 562 aaKnown RBP6.13□□□□□ -1.43
TDP1-207ENST00000553617 SNIP1Q8TAD8 396 aaKnown RBP6.13□□□□□ -1.43
TDP1-207ENST00000553617 IFT43Q96FT9 208 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 NLRP3Q96P20 1036 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 GRIP2Q9C0E4 1043 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 ZFAND3Q9H8U3 227 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 BCS1LQ9Y276 419 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 WASF2Q9Y6W5 498 aa6.13□□□□□ -1.43
TDP1-207ENST00000553617 SORBS3O60504 671 aa6.12□□□□□ -1.43
TDP1-207ENST00000553617 ERCC5P28715 1186 aaPredicted RBP6.12□□□□□ -1.43
TDP1-207ENST00000553617 GPC1P35052 558 aa6.12□□□□□ -1.43
TDP1-207ENST00000553617 TXLNAP40222 546 aa6.12□□□□□ -1.43
TDP1-207ENST00000553617 DNM1Q05193 864 aaKnown RBP6.12□□□□□ -1.43
TDP1-207ENST00000553617 NAALADL2Q58DX5 795 aa6.12□□□□□ -1.43
TDP1-207ENST00000553617 TREML1Q86YW5 311 aa6.12□□□□□ -1.43
TDP1-207ENST00000553617 FBF1Q8TES7 1133 aa6.12□□□□□ -1.43
TDP1-207ENST00000553617 METTL5Q9NRN9 209 aaKnown RBP6.12□□□□□ -1.43
TDP1-207ENST00000553617 ITGAEP38570 1179 aa6.11□□□□□ -1.43
TDP1-207ENST00000553617 WDR4P57081 412 aaKnown RBP6.11□□□□□ -1.43
TDP1-207ENST00000553617 FANCCQ00597 558 aa6.11□□□□□ -1.43
TDP1-207ENST00000553617 RELBQ01201 579 aa6.11□□□□□ -1.43
TDP1-207ENST00000553617 PSMD2Q13200 908 aa6.11□□□□□ -1.43
TDP1-207ENST00000553617 MEIOBQ8N635 442 aa6.11□□□□□ -1.43
TDP1-207ENST00000553617 DRC1Q96MC2 740 aa6.11□□□□□ -1.43
TDP1-207ENST00000553617 CSRNP1Q96S65 589 aa6.11□□□□□ -1.43
TDP1-207ENST00000553617 GNA15P30679 374 aa6.1□□□□□ -1.43
TDP1-207ENST00000553617 RNF144AP50876 292 aaPredicted RBP6.1□□□□□ -1.43
TDP1-207ENST00000553617 C4orf17Q53FE4 359 aa6.1□□□□□ -1.43
TDP1-207ENST00000553617 TMEM214Q6NUQ4 689 aaKnown RBP6.1□□□□□ -1.43
TDP1-207ENST00000553617 TMEM87AQ8NBN3 555 aa6.1□□□□□ -1.43
TDP1-207ENST00000553617 NUDT16Q96DE0 195 aaKnown RBP6.1□□□□□ -1.43
TDP1-207ENST00000553617 GGNBP2Q9H3C7 697 aa6.1□□□□□ -1.43
TDP1-207ENST00000553617 ZNF395Q9H8N7 513 aaPredicted RBP6.1□□□□□ -1.43
TDP1-207ENST00000553617 MRS2Q9HD23 443 aa6.1□□□□□ -1.43
TDP1-207ENST00000553617 AAASQ9NRG9 546 aa6.1□□□□□ -1.43
TDP1-207ENST00000553617 DMGDHQ9UI17 866 aaKnown RBP6.1□□□□□ -1.43
TDP1-207ENST00000553617 SPATA31C2B4DYI2 1134 aa6.09□□□□□ -1.43
TDP1-207ENST00000553617 TGFBR3LH3BV60 316 aa6.09□□□□□ -1.43
TDP1-207ENST00000553617 ST8SIA5O15466 376 aa6.09□□□□□ -1.43
TDP1-207ENST00000553617 ORC1Q13415 861 aa6.09□□□□□ -1.43
TDP1-207ENST00000553617 IER5Q5VY09 327 aa6.09□□□□□ -1.43
TDP1-207ENST00000553617 C9orf131Q5VYM1 1079 aa6.09□□□□□ -1.43
TDP1-207ENST00000553617 GPR152Q8TDT2 470 aa6.09□□□□□ -1.43
TDP1-207ENST00000553617 PIK3R5Q8WYR1 880 aa6.09□□□□□ -1.43
TDP1-207ENST00000553617 KLRG1Q96E93 195 aa6.09□□□□□ -1.43
TDP1-207ENST00000553617 DNAJC25Q9H1X3 360 aa6.09□□□□□ -1.43
TDP1-207ENST00000553617 TOR4AQ9NXH8 423 aa6.09□□□□□ -1.43
TDP1-207ENST00000553617 ZDHHC3Q9NYG2 299 aa6.09□□□□□ -1.43
TDP1-207ENST00000553617 VTI1BQ9UEU0 232 aa6.09□□□□□ -1.43
TDP1-207ENST00000553617 GPC6Q9Y625 555 aaPredicted RBP6.09□□□□□ -1.43
TDP1-207ENST00000553617 EIF1AYO14602 144 aaKnown RBP6.08□□□□□ -1.44
TDP1-207ENST00000553617 OPLAHO14841 1288 aa6.08□□□□□ -1.44
TDP1-207ENST00000553617 MICAL2O94851 1124 aa6.08□□□□□ -1.44
TDP1-207ENST00000553617 RPLP1P05386 114 aaKnown RBP6.08□□□□□ -1.44
TDP1-207ENST00000553617 CTSHP09668 335 aa6.08□□□□□ -1.44
TDP1-207ENST00000553617 PCSK2P16519 638 aa6.08□□□□□ -1.44
TDP1-207ENST00000553617 SMPD1P17405 629 aa6.08□□□□□ -1.44
TDP1-207ENST00000553617 PLA2G4AP47712 749 aa6.08□□□□□ -1.44
TDP1-207ENST00000553617 HIF1AQ16665 826 aa6.08□□□□□ -1.44
TDP1-207ENST00000553617 GNASQ5JWF2 1037 aa6.08□□□□□ -1.44
TDP1-207ENST00000553617 NT5DC4Q86YG4 428 aa6.08□□□□□ -1.44
TDP1-207ENST00000553617 FRMD6Q96NE9 622 aa6.08□□□□□ -1.44
TDP1-207ENST00000553617 FAM13BQ9NYF5 915 aa6.08□□□□□ -1.44
TDP1-207ENST00000553617 A6NHS1 94 aa6.07□□□□□ -1.44
TDP1-207ENST00000553617 SPINT1O43278 529 aa6.07□□□□□ -1.44
TDP1-207ENST00000553617 GTF2E1P29083 439 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms