RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CEMIPQ8WUJ3 1361 aa9.24□□□□□ -0.93
ATXN3-221ENST00000553498 HSPA2P54652 639 aa9.23□□□□□ -0.93
ATXN3-221ENST00000553498 DCTN1Q14203 1278 aa9.23□□□□□ -0.93
ATXN3-221ENST00000553498 NBPF6Q5VWK0 638 aa9.23□□□□□ -0.93
ATXN3-221ENST00000553498 MCM10Q7L590 875 aa9.23□□□□□ -0.93
ATXN3-221ENST00000553498 TSPYL6Q8N831 410 aa9.23□□□□□ -0.93
ATXN3-221ENST00000553498 ANKRD24Q8TF21 1146 aa9.23□□□□□ -0.93
ATXN3-221ENST00000553498 KCTD12Q96CX2 325 aaKnown RBP9.23□□□□□ -0.93
ATXN3-221ENST00000553498 NBPF4Q96M43 638 aa9.23□□□□□ -0.93
ATXN3-221ENST00000553498 BACH2Q9BYV9 841 aa9.23□□□□□ -0.93
ATXN3-221ENST00000553498 SPATA31A3Q5VYP0 1347 aa9.23□□□□□ -0.93
ATXN3-221ENST00000553498 INTS3Q68E01 1043 aaKnown RBP9.22□□□□□ -0.93
ATXN3-221ENST00000553498 SMYD5Q6GMV2 418 aa9.22□□□□□ -0.93
ATXN3-221ENST00000553498 PADI6Q6TGC4 694 aa9.22□□□□□ -0.93
ATXN3-221ENST00000553498 PACS2Q86VP3 889 aa9.22□□□□□ -0.93
ATXN3-221ENST00000553498 TMEM57Q8N5G2 664 aa9.22□□□□□ -0.93
ATXN3-221ENST00000553498 SEPT9Q9UHD8 586 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-221ENST00000553498 TRPM3Q9HCF6 1732 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-221ENST00000553498 MARF1Q9Y4F3 1742 aaKnown RBP9.22□□□□□ -0.93
ATXN3-221ENST00000553498 PXDNQ92626 1479 aa9.21□□□□□ -0.93
ATXN3-221ENST00000553498 MED1Q15648 1581 aaPredicted RBP9.21□□□□□ -0.93
ATXN3-221ENST00000553498 ZBTB7BO15156 539 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-221ENST00000553498 GPR37O15354 613 aa9.21□□□□□ -0.94
ATXN3-221ENST00000553498 IGHDP01880 384 aa9.21□□□□□ -0.94
ATXN3-221ENST00000553498 ANP32AP39687 249 aaKnown RBP9.21□□□□□ -0.94
ATXN3-221ENST00000553498 FAM161AQ3B820 660 aa9.21□□□□□ -0.94
ATXN3-221ENST00000553498 CCDC30Q5VVM6 783 aa9.21□□□□□ -0.94
ATXN3-221ENST00000553498 LMOD2Q6P5Q4 547 aa9.21□□□□□ -0.94
ATXN3-221ENST00000553498 LTV1Q96GA3 475 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-221ENST00000553498 STK31Q9BXU1 1019 aa9.21□□□□□ -0.94
ATXN3-221ENST00000553498 SLAIN2Q9P270 581 aa9.21□□□□□ -0.94
ATXN3-221ENST00000553498 PCDHB15Q9Y5E8 787 aa9.21□□□□□ -0.94
ATXN3-221ENST00000553498 SOS2Q07890 1332 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-221ENST00000553498 RGPD8O14715 1765 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-221ENST00000553498 PRKCSHP14314 528 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-221ENST00000553498 FAM98CQ17RN3 349 aaKnown RBP9.2□□□□□ -0.94
ATXN3-221ENST00000553498 C1orf141Q5JVX7 400 aa9.2□□□□□ -0.94
ATXN3-221ENST00000553498 THSD4Q6ZMP0 1018 aa9.2□□□□□ -0.94
ATXN3-221ENST00000553498 BRINP3Q76B58 766 aa9.2□□□□□ -0.94
ATXN3-221ENST00000553498 SMC5Q8IY18 1101 aa9.2□□□□□ -0.94
ATXN3-221ENST00000553498 IL17REQ8NFR9 667 aa9.2□□□□□ -0.94
ATXN3-221ENST00000553498 TATDN2Q93075 761 aa9.2□□□□□ -0.94
ATXN3-221ENST00000553498 WNT2BQ93097 391 aa9.2□□□□□ -0.94
ATXN3-221ENST00000553498 GCC1Q96CN9 775 aa9.2□□□□□ -0.94
ATXN3-221ENST00000553498 ZFRQ96KR1 1074 aaKnown RBP9.2□□□□□ -0.94
ATXN3-221ENST00000553498 LRRC37A3O60309 1634 aa9.2□□□□□ -0.94
ATXN3-221ENST00000553498 SMAPO00193 183 aa9.19□□□□□ -0.94
ATXN3-221ENST00000553498 EIF5BO60841 1220 aaKnown RBP9.19□□□□□ -0.94
ATXN3-221ENST00000553498 CCT4P50991 539 aaKnown RBP9.19□□□□□ -0.94
ATXN3-221ENST00000553498 XPCQ01831 940 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-221ENST00000553498 RAPGEF4Q8WZA2 1011 aa9.19□□□□□ -0.94
ATXN3-221ENST00000553498 SPG7Q9UQ90 795 aa9.19□□□□□ -0.94
ATXN3-221ENST00000553498 TNNQ9UQP3 1299 aa9.19□□□□□ -0.94
ATXN3-221ENST00000553498 ELL2O00472 640 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-221ENST00000553498 HSP90AB1P08238 724 aaKnown RBP9.18□□□□□ -0.94
ATXN3-221ENST00000553498 TEFQ10587 303 aa9.18□□□□□ -0.94
ATXN3-221ENST00000553498 ZNF530Q6P9A1 599 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-221ENST00000553498 RPAP2Q8IXW5 612 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-221ENST00000553498 ALS2Q96Q42 1657 aa9.18□□□□□ -0.94
ATXN3-221ENST00000553498 HCSTQ9UBK5 93 aa9.18□□□□□ -0.94
ATXN3-221ENST00000553498 CAMTA1Q9Y6Y1 1673 aa9.18□□□□□ -0.94
ATXN3-221ENST00000553498 GOLGA8CPA6NN73 597 aa9.17□□□□□ -0.94
ATXN3-221ENST00000553498 TATP17735 454 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-221ENST00000553498 NUDT18Q6ZVK8 323 aa9.17□□□□□ -0.94
ATXN3-221ENST00000553498 PNMA3Q9UL41 463 aa9.17□□□□□ -0.94
ATXN3-221ENST00000553498 ZNF335Q9H4Z2 1342 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-221ENST00000553498 ZBTB7CA1YPR0 619 aa9.16□□□□□ -0.94
ATXN3-221ENST00000553498 NBPF26B4DH59 902 aa9.16□□□□□ -0.94
ATXN3-221ENST00000553498 RNMTO43148 476 aaKnown RBP9.16□□□□□ -0.94
ATXN3-221ENST00000553498 NUCB1Q02818 461 aa9.16□□□□□ -0.94
ATXN3-221ENST00000553498 USHBP1Q8N6Y0 703 aa9.16□□□□□ -0.94
ATXN3-221ENST00000553498 LRRC59Q96AG4 307 aaKnown RBP9.16□□□□□ -0.94
ATXN3-221ENST00000553498 DDRGK1Q96HY6 314 aa9.16□□□□□ -0.94
ATXN3-221ENST00000553498 PDZRN3Q9UPQ7 1066 aa9.16□□□□□ -0.94
ATXN3-221ENST00000553498 LMO7Q8WWI1 1683 aa9.16□□□□□ -0.94
ATXN3-221ENST00000553498 PXDNLA1KZ92 1463 aa9.15□□□□□ -0.94
ATXN3-221ENST00000553498 SOWAHBA6NEL2 793 aa9.15□□□□□ -0.94
ATXN3-221ENST00000553498 BTBD11A6QL63 1104 aa9.15□□□□□ -0.94
ATXN3-221ENST00000553498 HMMRO75330 724 aa9.15□□□□□ -0.94
ATXN3-221ENST00000553498 EIF4A1P60842 406 aaKnown RBP9.15□□□□□ -0.94
ATXN3-221ENST00000553498 ZC3H6P61129 1189 aaKnown RBP9.15□□□□□ -0.94
ATXN3-221ENST00000553498 IFNL2Q8IZJ0 200 aa9.15□□□□□ -0.94
ATXN3-221ENST00000553498 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.94
ATXN3-221ENST00000553498 RGS12O14924 1447 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 IBTKQ9P2D0 1353 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-221ENST00000553498 GNAI3P08754 354 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 CSB-PGBD3P0DP91 1061 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 FECHP22830 423 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 RGS3P49796 1198 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 BCAMP50895 628 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 FLIIQ13045 1269 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 HIC1Q14526 733 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 C8orf34Q49A92 452 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 HDGFL1Q5TGJ6 251 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 ANKK1Q8NFD2 765 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 DCAF5Q96JK2 942 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 IPO9Q96P70 1041 aaKnown RBP9.14□□□□□ -0.95
ATXN3-221ENST00000553498 NLRP2Q9NX02 1062 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 MIS18AQ9NYP9 233 aa9.14□□□□□ -0.95
ATXN3-221ENST00000553498 STRCP1A6NGW2 1772 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms