RNA–Protein interactions for RNA: ENST00000553497.1

SUSD6-202, Transcript of sushi domain containing 6, humanhuman

TSL 3

Gene SUSD6, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD6-202ENST00000553497 PHACTR3Q96KR7 559 aa23.73■■□□□ 1.39
SUSD6-202ENST00000553497 BTBD11A6QL63 1104 aa23.72■■□□□ 1.39
SUSD6-202ENST00000553497 CAPN15O75808 1086 aa23.72■■□□□ 1.39
SUSD6-202ENST00000553497 ST5P78524 1137 aa23.72■■□□□ 1.39
SUSD6-202ENST00000553497 PRPF40BQ6NWY9 871 aaKnown RBP23.72■■□□□ 1.39
SUSD6-202ENST00000553497 DZIP3Q86Y13 1208 aaKnown RBP23.72■■□□□ 1.39
SUSD6-202ENST00000553497 CNKSR1Q969H4 720 aa23.72■■□□□ 1.39
SUSD6-202ENST00000553497 NPHP1O15259 732 aa23.71■■□□□ 1.39
SUSD6-202ENST00000553497 PIP4K2AP48426 406 aaPredicted RBP23.71■■□□□ 1.39
SUSD6-202ENST00000553497 NPM2Q86SE8 214 aaKnown RBP23.71■■□□□ 1.39
SUSD6-202ENST00000553497 USP16Q9Y5T5 823 aa23.71■■□□□ 1.39
SUSD6-202ENST00000553497 SCN4AP35499 1836 aa23.7■■□□□ 1.39
SUSD6-202ENST00000553497 DDNO94850 711 aaPredicted RBP23.7■■□□□ 1.38
SUSD6-202ENST00000553497 POTEIP0CG38 1075 aa23.7■■□□□ 1.38
SUSD6-202ENST00000553497 POTEJP0CG39 1038 aa23.7■■□□□ 1.38
SUSD6-202ENST00000553497 MASTLQ96GX5 879 aa23.7■■□□□ 1.38
SUSD6-202ENST00000553497 RSPH6AQ9H0K4 717 aa23.7■■□□□ 1.38
SUSD6-202ENST00000553497 PRAMEF22A3QJZ6 481 aa23.69■■□□□ 1.38
SUSD6-202ENST00000553497 PRKAR2BP31323 418 aa23.69■■□□□ 1.38
SUSD6-202ENST00000553497 CHADLQ6NUI6 762 aa23.69■■□□□ 1.38
SUSD6-202ENST00000553497 SOGA3Q5TF21 947 aa23.67■■□□□ 1.38
SUSD6-202ENST00000553497 CREBZFQ9NS37 354 aa23.67■■□□□ 1.38
SUSD6-202ENST00000553497 CLEC4GQ6UXB4 293 aa23.66■■□□□ 1.38
SUSD6-202ENST00000553497 C7orf43Q8WVR3 580 aa23.66■■□□□ 1.38
SUSD6-202ENST00000553497 NBPF5PQ86XG9 351 aaPredicted RBP23.65■■□□□ 1.38
SUSD6-202ENST00000553497 MKRN1Q9UHC7 482 aaKnown RBP23.64■■□□□ 1.37
SUSD6-202ENST00000553497 LAMB4A4D0S4 1761 aa23.64■■□□□ 1.37
SUSD6-202ENST00000553497 SNRPA1P09661 255 aaKnown RBP23.63■■□□□ 1.37
SUSD6-202ENST00000553497 MCM10Q7L590 875 aa23.63■■□□□ 1.37
SUSD6-202ENST00000553497 CCDC93Q567U6 631 aa23.62■■□□□ 1.37
SUSD6-202ENST00000553497 L3MBTL3Q96JM7 780 aaPredicted RBP23.62■■□□□ 1.37
SUSD6-202ENST00000553497 CFAP53Q96M91 514 aa23.62■■□□□ 1.37
SUSD6-202ENST00000553497 ZNF652Q9Y2D9 606 aa23.62■■□□□ 1.37
SUSD6-202ENST00000553497 PASKQ96RG2 1323 aa23.61■■□□□ 1.37
SUSD6-202ENST00000553497 ADAMTSL1Q8N6G6 1762 aa23.61■■□□□ 1.37
SUSD6-202ENST00000553497 KLRG2A4D1S0 409 aaPredicted RBP23.61■■□□□ 1.37
SUSD6-202ENST00000553497 IQCA1LA6NCM1 817 aa23.61■■□□□ 1.37
SUSD6-202ENST00000553497 NBPF26B4DH59 902 aa23.61■■□□□ 1.37
SUSD6-202ENST00000553497 NPR1P16066 1061 aa23.61■■□□□ 1.37
SUSD6-202ENST00000553497 NBPF10Q6P3W6 841 aaKnown RBP23.61■■□□□ 1.37
SUSD6-202ENST00000553497 NBPF15Q8N660 670 aa23.61■■□□□ 1.37
SUSD6-202ENST00000553497 LDHDQ86WU2 507 aa23.6■■□□□ 1.37
SUSD6-202ENST00000553497 RTF1Q92541 710 aaKnown RBP23.6■■□□□ 1.37
SUSD6-202ENST00000553497 TAF1DQ9H5J8 278 aaPredicted RBP23.6■■□□□ 1.37
SUSD6-202ENST00000553497 DLG5Q8TDM6 1919 aa23.59■■□□□ 1.37
SUSD6-202ENST00000553497 FKBP4Q02790 459 aaKnown RBP eCLIP23.59■■□□□ 1.37
SUSD6-202ENST00000553497 DCTN1Q14203 1278 aa23.59■■□□□ 1.37
SUSD6-202ENST00000553497 OLFM4Q6UX06 510 aa23.59■■□□□ 1.37
SUSD6-202ENST00000553497 NIP7Q9Y221 180 aaKnown RBP eCLIP23.59■■□□□ 1.37
SUSD6-202ENST00000553497 CNTNAP1P78357 1384 aa23.59■■□□□ 1.37
SUSD6-202ENST00000553497 NUP98P52948 1817 aa23.59■■□□□ 1.37
SUSD6-202ENST00000553497 ZNF541Q9H0D2 1346 aa23.59■■□□□ 1.37
SUSD6-202ENST00000553497 TPTE2Q6XPS3 522 aa23.58■■□□□ 1.37
SUSD6-202ENST00000553497 ZNF277Q9NRM2 450 aaPredicted RBP23.58■■□□□ 1.37
SUSD6-202ENST00000553497 NUDCQ9Y266 331 aa23.58■■□□□ 1.37
SUSD6-202ENST00000553497 RGL2O15211 777 aa23.57■■□□□ 1.36
SUSD6-202ENST00000553497 U2AF1L5P0DN76 240 aaPredicted RBP23.57■■□□□ 1.36
SUSD6-202ENST00000553497 U2AF1Q01081 240 aaKnown RBP eCLIP23.57■■□□□ 1.36
SUSD6-202ENST00000553497 KDM3BQ7LBC6 1761 aa23.57■■□□□ 1.36
SUSD6-202ENST00000553497 FAM177BA6PVY3 158 aa23.56■■□□□ 1.36
SUSD6-202ENST00000553497 HLFQ16534 295 aa23.56■■□□□ 1.36
SUSD6-202ENST00000553497 SNED1Q8TER0 1413 aa23.54■■□□□ 1.36
SUSD6-202ENST00000553497 ITGBL1O95965 494 aaPredicted RBP23.54■■□□□ 1.36
SUSD6-202ENST00000553497 PPP2R1AP30153 589 aa23.54■■□□□ 1.36
SUSD6-202ENST00000553497 RTKN2Q8IZC4 609 aa23.54■■□□□ 1.36
SUSD6-202ENST00000553497 FOXN1O15353 648 aa23.53■■□□□ 1.36
SUSD6-202ENST00000553497 HTATSF1O43719 755 aaKnown RBP23.53■■□□□ 1.36
SUSD6-202ENST00000553497 EAPPQ56P03 285 aaPredicted RBP23.53■■□□□ 1.36
SUSD6-202ENST00000553497 HACL1Q9UJ83 578 aa23.53■■□□□ 1.36
SUSD6-202ENST00000553497 IARSP41252 1262 aaKnown RBP23.52■■□□□ 1.36
SUSD6-202ENST00000553497 TMEM88BA6NKF7 163 aa23.51■■□□□ 1.35
SUSD6-202ENST00000553497 FZD9O00144 591 aa23.51■■□□□ 1.35
SUSD6-202ENST00000553497 ALDH1B1P30837 517 aa23.51■■□□□ 1.35
SUSD6-202ENST00000553497 EPHX2P34913 555 aa23.51■■□□□ 1.35
SUSD6-202ENST00000553497 TAF7Q15545 349 aaPredicted RBP23.51■■□□□ 1.35
SUSD6-202ENST00000553497 SYNE4Q8N205 404 aa23.51■■□□□ 1.35
SUSD6-202ENST00000553497 MIS18AQ9NYP9 233 aa23.51■■□□□ 1.35
SUSD6-202ENST00000553497 ABCC12Q96J65 1359 aa23.51■■□□□ 1.35
SUSD6-202ENST00000553497 VEGFBP49765 207 aa23.5■■□□□ 1.35
SUSD6-202ENST00000553497 RNF123Q5XPI4 1314 aa23.5■■□□□ 1.35
SUSD6-202ENST00000553497 COL4A5P29400 1685 aa23.5■■□□□ 1.35
SUSD6-202ENST00000553497 GTF2E1P29083 439 aaPredicted RBP23.49■■□□□ 1.35
SUSD6-202ENST00000553497 CRY2Q49AN0 593 aa23.49■■□□□ 1.35
SUSD6-202ENST00000553497 CLEC11AQ9Y240 323 aa23.49■■□□□ 1.35
SUSD6-202ENST00000553497 LTBP1Q14766 1721 aa23.49■■□□□ 1.35
SUSD6-202ENST00000553497 NUTM1Q86Y26 1132 aa23.47■■□□□ 1.35
SUSD6-202ENST00000553497 NGEFQ8N5V2 710 aa23.47■■□□□ 1.35
SUSD6-202ENST00000553497 PSMD1Q99460 953 aa23.47■■□□□ 1.35
SUSD6-202ENST00000553497 MAP1SQ66K74 1059 aaPredicted RBP23.46■■□□□ 1.35
SUSD6-202ENST00000553497 PNMA8AQ86V59 439 aaPredicted RBP23.46■■□□□ 1.35
SUSD6-202ENST00000553497 GPC2Q8N158 579 aa23.46■■□□□ 1.35
SUSD6-202ENST00000553497 NYXQ9GZU5 481 aa23.46■■□□□ 1.35
SUSD6-202ENST00000553497 PRDM10Q9NQV6 1147 aa23.46■■□□□ 1.35
SUSD6-202ENST00000553497 MAP3K15Q6ZN16 1313 aa23.45■■□□□ 1.34
SUSD6-202ENST00000553497 ERVV-1B6SEH8 477 aa23.45■■□□□ 1.34
SUSD6-202ENST00000553497 CNTROBQ8N137 903 aa23.45■■□□□ 1.34
SUSD6-202ENST00000553497 RIC1Q4ADV7 1423 aa23.44■■□□□ 1.34
SUSD6-202ENST00000553497 TTLL7Q6ZT98 887 aa23.44■■□□□ 1.34
SUSD6-202ENST00000553497 UBN2Q6ZU65 1347 aa23.43■■□□□ 1.34
SUSD6-202ENST00000553497 CTCFP49711 727 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms