RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 PTPRGP23470 1445 aa7.51□□□□□ -1.21
ATXN3-220ENST00000553491 PRXQ9BXM0 1461 aa7.5□□□□□ -1.21
ATXN3-220ENST00000553491 LBRQ14739 615 aaKnown RBP7.5□□□□□ -1.21
ATXN3-220ENST00000553491 WHAMMQ8TF30 809 aa7.5□□□□□ -1.21
ATXN3-220ENST00000553491 NDFIP2Q9NV92 336 aa7.5□□□□□ -1.21
ATXN3-220ENST00000553491 RFX1P22670 979 aa7.49□□□□□ -1.21
ATXN3-220ENST00000553491 LMOD1P29536 600 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-220ENST00000553491 SRPK2P78362 688 aaKnown RBP7.49□□□□□ -1.21
ATXN3-220ENST00000553491 SRSF11Q05519 484 aaKnown RBP7.49□□□□□ -1.21
ATXN3-220ENST00000553491 PTK7Q13308 1070 aa7.49□□□□□ -1.21
ATXN3-220ENST00000553491 TEAD4Q15561 434 aa7.49□□□□□ -1.21
ATXN3-220ENST00000553491 CRTC2Q53ET0 693 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-220ENST00000553491 ZNF385CQ66K41 422 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-220ENST00000553491 POTEAQ6S8J7 498 aa7.49□□□□□ -1.21
ATXN3-220ENST00000553491 C7orf43Q8WVR3 580 aa7.49□□□□□ -1.21
ATXN3-220ENST00000553491 TNIKQ9UKE5 1360 aa7.48□□□□□ -1.21
ATXN3-220ENST00000553491 SFI1A8K8P3 1242 aa7.48□□□□□ -1.21
ATXN3-220ENST00000553491 PPP1R15AO75807 674 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-220ENST00000553491 ADAMTS2O95450 1211 aa7.48□□□□□ -1.21
ATXN3-220ENST00000553491 RASA1P20936 1047 aa7.48□□□□□ -1.21
ATXN3-220ENST00000553491 SLC9A9Q8IVB4 645 aa7.48□□□□□ -1.21
ATXN3-220ENST00000553491 C1orf216Q8TAB5 229 aa7.48□□□□□ -1.21
ATXN3-220ENST00000553491 ZNF594Q96JF6 807 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-220ENST00000553491 CFHR5Q9BXR6 569 aa7.48□□□□□ -1.21
ATXN3-220ENST00000553491 MBIPQ9NS73 344 aa7.48□□□□□ -1.21
ATXN3-220ENST00000553491 ZDHHC3Q9NYG2 299 aa7.48□□□□□ -1.21
ATXN3-220ENST00000553491 CABP1Q9NZU7 370 aa7.48□□□□□ -1.21
ATXN3-220ENST00000553491 HCN2Q9UL51 889 aa7.48□□□□□ -1.21
ATXN3-220ENST00000553491 PARP3Q9Y6F1 533 aa7.48□□□□□ -1.21
ATXN3-220ENST00000553491 KIF21BO75037 1637 aa7.48□□□□□ -1.21
ATXN3-220ENST00000553491 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-220ENST00000553491 LOC100996750A0A140TA64 210 aa7.47□□□□□ -1.21
ATXN3-220ENST00000553491 C21orf2O43822 256 aa7.47□□□□□ -1.21
ATXN3-220ENST00000553491 NOS2P35228 1153 aa7.47□□□□□ -1.21
ATXN3-220ENST00000553491 TXLNAP40222 546 aa7.47□□□□□ -1.21
ATXN3-220ENST00000553491 TBCELQ5QJ74 424 aa7.47□□□□□ -1.21
ATXN3-220ENST00000553491 FOXR1Q6PIV2 292 aa7.47□□□□□ -1.21
ATXN3-220ENST00000553491 TSEN2Q8NCE0 465 aaKnown RBP7.47□□□□□ -1.21
ATXN3-220ENST00000553491 KRTAP4-6Q9BYQ5 205 aa7.47□□□□□ -1.21
ATXN3-220ENST00000553491 TSPAN10Q9H1Z9 355 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-220ENST00000553491 GOLGA3Q08378 1498 aa7.47□□□□□ -1.21
ATXN3-220ENST00000553491 KIAA0556O60303 1618 aa7.46□□□□□ -1.21
ATXN3-220ENST00000553491 ADCY10Q96PN6 1610 aa7.46□□□□□ -1.21
ATXN3-220ENST00000553491 LOC105371045A0A1W2PR82 267 aa7.46□□□□□ -1.22
ATXN3-220ENST00000553491 FAM196BA6NMK8 535 aa7.46□□□□□ -1.22
ATXN3-220ENST00000553491 EML1O00423 815 aa7.46□□□□□ -1.22
ATXN3-220ENST00000553491 BNIP3LO60238 219 aa7.46□□□□□ -1.22
ATXN3-220ENST00000553491 ARHGEF15O94989 841 aa7.46□□□□□ -1.22
ATXN3-220ENST00000553491 SH3PXD2AQ5TCZ1 1133 aa7.46□□□□□ -1.22
ATXN3-220ENST00000553491 LYPD4Q6UWN0 246 aa7.46□□□□□ -1.22
ATXN3-220ENST00000553491 L3MBTL2Q969R5 705 aa7.46□□□□□ -1.22
ATXN3-220ENST00000553491 PBXIP1Q96AQ6 731 aa7.46□□□□□ -1.22
ATXN3-220ENST00000553491 AIDAQ96BJ3 306 aa7.46□□□□□ -1.22
ATXN3-220ENST00000553491 ZIC5Q96T25 663 aa7.46□□□□□ -1.22
ATXN3-220ENST00000553491 VRTNQ9H8Y1 702 aa7.46□□□□□ -1.22
ATXN3-220ENST00000553491 UGGT2Q9NYU1 1516 aa7.46□□□□□ -1.22
ATXN3-220ENST00000553491 KIF13AQ9H1H9 1805 aa7.45□□□□□ -1.22
ATXN3-220ENST00000553491 CSB-PGBD3P0DP91 1061 aa7.45□□□□□ -1.22
ATXN3-220ENST00000553491 NLRP8Q86W28 1048 aa7.45□□□□□ -1.22
ATXN3-220ENST00000553491 PGBD3Q8N328 593 aa7.45□□□□□ -1.22
ATXN3-220ENST00000553491 RETREG2Q8NC44 543 aa7.45□□□□□ -1.22
ATXN3-220ENST00000553491 KLRG1Q96E93 195 aa7.45□□□□□ -1.22
ATXN3-220ENST00000553491 TRERF1Q96PN7 1200 aa7.45□□□□□ -1.22
ATXN3-220ENST00000553491 DISP1Q96F81 1524 aa7.45□□□□□ -1.22
ATXN3-220ENST00000553491 A0A1W2PNR3 127 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 USP17L15C9J2P7 530 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 USP17L10C9JJH3 530 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 USP17L13C9JLJ4 530 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 USP17L12C9JPN9 530 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 USP17L11C9JVI0 530 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 USP17L21D6R901 530 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 USP17L18D6R9N7 530 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 USP17L22D6RA61 530 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 USP17L17D6RBQ6 530 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 USP17L19D6RCP7 530 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 USP17L20D6RJB6 530 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 PDIA4P13667 645 aaKnown RBP7.44□□□□□ -1.22
ATXN3-220ENST00000553491 HIRAP54198 1017 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-220ENST00000553491 SEC13P55735 322 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 FAM69CQ0P6D2 419 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 USP17L24Q0WX57 530 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 NBPF1Q3BBV0 1214 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 EFHC2Q5JST6 749 aa7.44□□□□□ -1.22
ATXN3-220ENST00000553491 LARP1Q6PKG0 1096 aaKnown RBP7.44□□□□□ -1.22
ATXN3-220ENST00000553491 ZCCHC2Q9C0B9 1178 aaKnown RBP7.44□□□□□ -1.22
ATXN3-220ENST00000553491 FAM181BA6NEQ2 426 aa7.43□□□□□ -1.22
ATXN3-220ENST00000553491 C2CD2LO14523 706 aa7.43□□□□□ -1.22
ATXN3-220ENST00000553491 MX2P20592 715 aa7.43□□□□□ -1.22
ATXN3-220ENST00000553491 DPYDQ12882 1025 aa7.43□□□□□ -1.22
ATXN3-220ENST00000553491 ANKMY2Q8IV38 441 aa7.43□□□□□ -1.22
ATXN3-220ENST00000553491 ABHD17AQ96GS6 310 aa7.43□□□□□ -1.22
ATXN3-220ENST00000553491 ATXN7L1Q9ULK2 861 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-220ENST00000553491 ACIN1Q9UKV3 1341 aaKnown RBP7.43□□□□□ -1.22
ATXN3-220ENST00000553491 UACAQ9BZF9 1416 aa7.43□□□□□ -1.22
ATXN3-220ENST00000553491 ZCCHC11Q5TAX3 1644 aaKnown RBP7.42□□□□□ -1.22
ATXN3-220ENST00000553491 SERTM1A2A2V5 107 aa7.42□□□□□ -1.22
ATXN3-220ENST00000553491 CELA2BP08218 269 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-220ENST00000553491 PSMA6P60900 246 aaKnown RBP7.42□□□□□ -1.22
ATXN3-220ENST00000553491 CDCA8Q53HL2 280 aa7.42□□□□□ -1.22
ATXN3-220ENST00000553491 ACDQ96AP0 544 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms