RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 BRIP1Q9BX63 1249 aa7.24□□□□□ -1.25
CKAP4-203ENST00000553039 PODXL2Q9NZ53 605 aa7.24□□□□□ -1.25
CKAP4-203ENST00000553039 TLL2Q9Y6L7 1015 aa7.24□□□□□ -1.25
CKAP4-203ENST00000553039 USP54Q70EL1 1684 aa7.24□□□□□ -1.25
CKAP4-203ENST00000553039 KIF13BQ9NQT8 1826 aa7.23□□□□□ -1.25
CKAP4-203ENST00000553039 SEMA3EO15041 775 aa7.23□□□□□ -1.25
CKAP4-203ENST00000553039 AOC2O75106 756 aa7.23□□□□□ -1.25
CKAP4-203ENST00000553039 PRR29P0C7W0 189 aa7.23□□□□□ -1.25
CKAP4-203ENST00000553039 PHKG2P15735 406 aa7.23□□□□□ -1.25
CKAP4-203ENST00000553039 LMOD1P29536 600 aaPredicted RBP7.23□□□□□ -1.25
CKAP4-203ENST00000553039 PDAP1Q13442 181 aaKnown RBP7.23□□□□□ -1.25
CKAP4-203ENST00000553039 NFIXQ14938 502 aa7.23□□□□□ -1.25
CKAP4-203ENST00000553039 RRS1Q15050 365 aaKnown RBP7.23□□□□□ -1.25
CKAP4-203ENST00000553039 PKN2Q16513 984 aaKnown RBP7.23□□□□□ -1.25
CKAP4-203ENST00000553039 BICDL1Q6ZP65 573 aa7.23□□□□□ -1.25
CKAP4-203ENST00000553039 SLC4A9Q96Q91 983 aa7.23□□□□□ -1.25
CKAP4-203ENST00000553039 MFRPQ9BY79 579 aa7.23□□□□□ -1.25
CKAP4-203ENST00000553039 NARFQ9UHQ1 456 aa7.23□□□□□ -1.25
CKAP4-203ENST00000553039 ARIH1Q9Y4X5 557 aaPredicted RBP7.23□□□□□ -1.25
CKAP4-203ENST00000553039 EDC4Q6P2E9 1401 aaKnown RBP7.23□□□□□ -1.25
CKAP4-203ENST00000553039 ARFGEF1Q9Y6D6 1849 aa7.22□□□□□ -1.25
CKAP4-203ENST00000553039 RTL1A6NKG5 1358 aa7.22□□□□□ -1.25
CKAP4-203ENST00000553039 PTCD1O75127 700 aaKnown RBP7.22□□□□□ -1.25
CKAP4-203ENST00000553039 NOGQ13253 232 aa7.22□□□□□ -1.25
CKAP4-203ENST00000553039 CST9Q5W186 159 aa7.22□□□□□ -1.25
CKAP4-203ENST00000553039 SMYD5Q6GMV2 418 aa7.22□□□□□ -1.25
CKAP4-203ENST00000553039 RTKN2Q8IZC4 609 aa7.22□□□□□ -1.25
CKAP4-203ENST00000553039 GPC2Q8N158 579 aa7.22□□□□□ -1.25
CKAP4-203ENST00000553039 SLC17A8Q8NDX2 589 aa7.22□□□□□ -1.25
CKAP4-203ENST00000553039 JDP2Q8WYK2 163 aa7.22□□□□□ -1.25
CKAP4-203ENST00000553039 QRICH2Q9H0J4 1663 aa7.22□□□□□ -1.25
CKAP4-203ENST00000553039 SBF1O95248 1867 aa7.21□□□□□ -1.25
CKAP4-203ENST00000553039 UBR3Q6ZT12 1888 aa7.21□□□□□ -1.25
CKAP4-203ENST00000553039 INSRP06213 1382 aa7.21□□□□□ -1.25
CKAP4-203ENST00000553039 DOT1LQ8TEK3 1739 aa7.21□□□□□ -1.25
CKAP4-203ENST00000553039 NPHP1O15259 732 aa7.21□□□□□ -1.26
CKAP4-203ENST00000553039 CIAPIN1Q6FI81 312 aa7.21□□□□□ -1.26
CKAP4-203ENST00000553039 STYK1Q6J9G0 422 aa7.21□□□□□ -1.26
CKAP4-203ENST00000553039 USP50Q70EL3 339 aaPredicted RBP7.21□□□□□ -1.26
CKAP4-203ENST00000553039 CTU1Q7Z7A3 348 aaKnown RBP7.21□□□□□ -1.26
CKAP4-203ENST00000553039 SAPCD2Q86UD0 394 aa7.21□□□□□ -1.26
CKAP4-203ENST00000553039 C4AP0C0L4 1744 aa7.21□□□□□ -1.26
CKAP4-203ENST00000553039 PKD1L3Q7Z443 1732 aa7.21□□□□□ -1.26
CKAP4-203ENST00000553039 TAF1LQ8IZX4 1826 aa7.2□□□□□ -1.26
CKAP4-203ENST00000553039 A0A087WZG4 1122 aa7.2□□□□□ -1.26
CKAP4-203ENST00000553039 EIF6P56537 245 aaKnown RBP7.2□□□□□ -1.26
CKAP4-203ENST00000553039 INTS5Q6P9B9 1019 aaKnown RBP7.2□□□□□ -1.26
CKAP4-203ENST00000553039 MASTLQ96GX5 879 aa7.2□□□□□ -1.26
CKAP4-203ENST00000553039 ZMYND15Q9H091 742 aa7.2□□□□□ -1.26
CKAP4-203ENST00000553039 SAGE1Q9NXZ1 904 aa7.2□□□□□ -1.26
CKAP4-203ENST00000553039 KIF24Q5T7B8 1368 aa7.2□□□□□ -1.26
CKAP4-203ENST00000553039 ST20-MTHFSA0A0A6YYL1 179 aa7.19□□□□□ -1.26
CKAP4-203ENST00000553039 FZD9O00144 591 aa7.19□□□□□ -1.26
CKAP4-203ENST00000553039 CELF2O95319 508 aaKnown RBP7.19□□□□□ -1.26
CKAP4-203ENST00000553039 MTHFSP49914 203 aa7.19□□□□□ -1.26
CKAP4-203ENST00000553039 FKBP4Q02790 459 aaKnown RBP eCLIP7.19□□□□□ -1.26
CKAP4-203ENST00000553039 PLEKHO1Q53GL0 409 aaPredicted RBP7.19□□□□□ -1.26
CKAP4-203ENST00000553039 CCDC93Q567U6 631 aa7.19□□□□□ -1.26
CKAP4-203ENST00000553039 NPM2Q86SE8 214 aaKnown RBP7.19□□□□□ -1.26
CKAP4-203ENST00000553039 REM2Q8IYK8 340 aaPredicted RBP7.19□□□□□ -1.26
CKAP4-203ENST00000553039 CCDC102AQ96A19 550 aa7.19□□□□□ -1.26
CKAP4-203ENST00000553039 FYB1O15117 783 aa7.18□□□□□ -1.26
CKAP4-203ENST00000553039 PPM1GO15355 546 aaPredicted RBP7.18□□□□□ -1.26
CKAP4-203ENST00000553039 FXR1P51114 621 aaKnown RBP eCLIP7.18□□□□□ -1.26
CKAP4-203ENST00000553039 AMOTQ4VCS5 1084 aa7.18□□□□□ -1.26
CKAP4-203ENST00000553039 NFATC2IPQ8NCF5 419 aa7.18□□□□□ -1.26
CKAP4-203ENST00000553039 RSPH6AQ9H0K4 717 aa7.18□□□□□ -1.26
CKAP4-203ENST00000553039 HDAC9Q9UKV0 1011 aa7.18□□□□□ -1.26
CKAP4-203ENST00000553039 GJA3Q9Y6H8 435 aa7.18□□□□□ -1.26
CKAP4-203ENST00000553039 RNF123Q5XPI4 1314 aa7.18□□□□□ -1.26
CKAP4-203ENST00000553039 WASHC2AQ641Q2 1341 aa7.18□□□□□ -1.26
CKAP4-203ENST00000553039 TONSLQ96HA7 1378 aa7.18□□□□□ -1.26
CKAP4-203ENST00000553039 KIAA1551Q9HCM1 1747 aa7.18□□□□□ -1.26
CKAP4-203ENST00000553039 TRPA1O75762 1119 aa7.17□□□□□ -1.26
CKAP4-203ENST00000553039 SRGNP10124 158 aa7.17□□□□□ -1.26
CKAP4-203ENST00000553039 ALDH1B1P30837 517 aa7.17□□□□□ -1.26
CKAP4-203ENST00000553039 ST5P78524 1137 aa7.17□□□□□ -1.26
CKAP4-203ENST00000553039 PRPF40BQ6NWY9 871 aaKnown RBP7.17□□□□□ -1.26
CKAP4-203ENST00000553039 SYNE4Q8N205 404 aa7.17□□□□□ -1.26
CKAP4-203ENST00000553039 SETDB2Q96T68 719 aa7.17□□□□□ -1.26
CKAP4-203ENST00000553039 EYA1Q99502 592 aa7.17□□□□□ -1.26
CKAP4-203ENST00000553039 GGNBP2Q9H3C7 697 aa7.17□□□□□ -1.26
CKAP4-203ENST00000553039 ZNF277Q9NRM2 450 aaPredicted RBP7.17□□□□□ -1.26
CKAP4-203ENST00000553039 HPS5Q9UPZ3 1129 aa7.17□□□□□ -1.26
CKAP4-203ENST00000553039 VIRMAQ69YN4 1812 aaKnown RBP7.17□□□□□ -1.26
CKAP4-203ENST00000553039 ROCK2O75116 1388 aaKnown RBP7.17□□□□□ -1.26
CKAP4-203ENST00000553039 FLT4P35916 1363 aa7.17□□□□□ -1.26
CKAP4-203ENST00000553039 KDRP35968 1356 aa7.17□□□□□ -1.26
CKAP4-203ENST00000553039 FAM208AQ9UK61 1670 aaKnown RBP7.16□□□□□ -1.26
CKAP4-203ENST00000553039 TOGARAM1Q9Y4F4 1720 aa7.16□□□□□ -1.26
CKAP4-203ENST00000553039 BRCA1P38398 1863 aaKnown RBP7.16□□□□□ -1.26
CKAP4-203ENST00000553039 TRAF5O00463 557 aa7.16□□□□□ -1.26
CKAP4-203ENST00000553039 IARSP41252 1262 aaKnown RBP7.16□□□□□ -1.26
CKAP4-203ENST00000553039 GRIPAP1Q4V328 841 aa7.16□□□□□ -1.26
CKAP4-203ENST00000553039 C1orf141Q5JVX7 400 aa7.16□□□□□ -1.26
CKAP4-203ENST00000553039 CDC37L1Q7L3B6 337 aa7.16□□□□□ -1.26
CKAP4-203ENST00000553039 FBXO22Q8NEZ5 403 aa7.16□□□□□ -1.26
CKAP4-203ENST00000553039 C7orf43Q8WVR3 580 aa7.16□□□□□ -1.26
CKAP4-203ENST00000553039 L3MBTL2Q969R5 705 aa7.16□□□□□ -1.26
CKAP4-203ENST00000553039 RNF186Q9NXI6 227 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms