RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 FKBP8Q14318 412 aa13.15□□□□□ -0.3
TRAFD1-208ENST00000552890 ANKRD13DQ6ZTN6 518 aa13.15□□□□□ -0.3
TRAFD1-208ENST00000552890 PLBD2Q8NHP8 589 aa13.15□□□□□ -0.3
TRAFD1-208ENST00000552890 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
TRAFD1-208ENST00000552890 SRP68Q9UHB9 627 aaKnown RBP13.15□□□□□ -0.3
TRAFD1-208ENST00000552890 PDE6BP35913 854 aa13.14□□□□□ -0.31
TRAFD1-208ENST00000552890 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
TRAFD1-208ENST00000552890 NEXNQ0ZGT2 675 aa13.14□□□□□ -0.31
TRAFD1-208ENST00000552890 NFIXQ14938 502 aa13.14□□□□□ -0.31
TRAFD1-208ENST00000552890 COPS6Q7L5N1 327 aa13.14□□□□□ -0.31
TRAFD1-208ENST00000552890 AMIGO3Q86WK7 504 aa13.14□□□□□ -0.31
TRAFD1-208ENST00000552890 C8orf58Q8NAV2 365 aa13.14□□□□□ -0.31
TRAFD1-208ENST00000552890 TSR2Q969E8 191 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-208ENST00000552890 SYT17Q9BSW7 474 aa13.14□□□□□ -0.31
TRAFD1-208ENST00000552890 NIP7Q9Y221 180 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRAFD1-208ENST00000552890 CACNA1FO60840 1977 aa13.14□□□□□ -0.31
TRAFD1-208ENST00000552890 IBTKQ9P2D0 1353 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-208ENST00000552890 ELL2O00472 640 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-208ENST00000552890 SERPINB2P05120 415 aa13.13□□□□□ -0.31
TRAFD1-208ENST00000552890 PDIA6Q15084 440 aa13.13□□□□□ -0.31
TRAFD1-208ENST00000552890 NBPF5PQ86XG9 351 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-208ENST00000552890 CNBD1Q8NA66 436 aa13.13□□□□□ -0.31
TRAFD1-208ENST00000552890 XAGE3Q8WTP9 111 aa13.13□□□□□ -0.31
TRAFD1-208ENST00000552890 FHDC1Q9C0D6 1143 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-208ENST00000552890 C4AP0C0L4 1744 aa13.13□□□□□ -0.31
TRAFD1-208ENST00000552890 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
TRAFD1-208ENST00000552890 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
TRAFD1-208ENST00000552890 POLRMTO00411 1230 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-208ENST00000552890 GRIN3BO60391 1043 aa13.12□□□□□ -0.31
TRAFD1-208ENST00000552890 VAMP4O75379 141 aa13.12□□□□□ -0.31
TRAFD1-208ENST00000552890 EXOSC9Q06265 439 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-208ENST00000552890 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-208ENST00000552890 RIC3Q7Z5B4 369 aa13.12□□□□□ -0.31
TRAFD1-208ENST00000552890 BRIP1Q9BX63 1249 aa13.12□□□□□ -0.31
TRAFD1-208ENST00000552890 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
TRAFD1-208ENST00000552890 AIMP1Q12904 312 aaKnown RBP13.11□□□□□ -0.31
TRAFD1-208ENST00000552890 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
TRAFD1-208ENST00000552890 ALDH1L2Q3SY69 923 aa13.11□□□□□ -0.31
TRAFD1-208ENST00000552890 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
TRAFD1-208ENST00000552890 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
TRAFD1-208ENST00000552890 BCL2L12Q9HB09 334 aa13.11□□□□□ -0.31
TRAFD1-208ENST00000552890 SCN7AQ01118 1682 aa13.1□□□□□ -0.31
TRAFD1-208ENST00000552890 H0YIN7 160 aa13.1□□□□□ -0.31
TRAFD1-208ENST00000552890 TBC1D9BQ66K14 1250 aa13.1□□□□□ -0.31
TRAFD1-208ENST00000552890 KSR2Q6VAB6 950 aa13.1□□□□□ -0.31
TRAFD1-208ENST00000552890 TRMT2AQ8IZ69 625 aaKnown RBP13.1□□□□□ -0.31
TRAFD1-208ENST00000552890 ZBTB3Q9H5J0 574 aa13.1□□□□□ -0.31
TRAFD1-208ENST00000552890 PIP4K2AP48426 406 aaPredicted RBP13.09□□□□□ -0.31
TRAFD1-208ENST00000552890 KRT24Q2M2I5 525 aa13.09□□□□□ -0.31
TRAFD1-208ENST00000552890 BICDL1Q6ZP65 573 aa13.09□□□□□ -0.31
TRAFD1-208ENST00000552890 LRP10Q7Z4F1 713 aa13.09□□□□□ -0.31
TRAFD1-208ENST00000552890 ZNF34Q8IZ26 560 aa13.09□□□□□ -0.31
TRAFD1-208ENST00000552890 UTP14AQ9BVJ6 771 aaKnown RBP13.09□□□□□ -0.31
TRAFD1-208ENST00000552890 SRCAPQ6ZRS2 3230 aa13.08□□□□□ -0.32
TRAFD1-208ENST00000552890 C10orf71Q711Q0 1435 aa13.08□□□□□ -0.32
TRAFD1-208ENST00000552890 DDR1Q08345 913 aa13.08□□□□□ -0.32
TRAFD1-208ENST00000552890 SOGA3Q5TF21 947 aa13.08□□□□□ -0.32
TRAFD1-208ENST00000552890 TTLL7Q6ZT98 887 aa13.08□□□□□ -0.32
TRAFD1-208ENST00000552890 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
TRAFD1-208ENST00000552890 TSPYL6Q8N831 410 aa13.08□□□□□ -0.32
TRAFD1-208ENST00000552890 CCDC191Q8NCU4 936 aa13.08□□□□□ -0.32
TRAFD1-208ENST00000552890 PIM2Q9P1W9 311 aa13.08□□□□□ -0.32
TRAFD1-208ENST00000552890 HDAC5Q9UQL6 1122 aa13.08□□□□□ -0.32
TRAFD1-208ENST00000552890 PTPRCP08575 1304 aa13.08□□□□□ -0.32
TRAFD1-208ENST00000552890 BCORQ6W2J9 1755 aa13.07□□□□□ -0.32
TRAFD1-208ENST00000552890 IPO8O15397 1037 aaKnown RBP13.07□□□□□ -0.32
TRAFD1-208ENST00000552890 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
TRAFD1-208ENST00000552890 FLIIQ13045 1269 aa13.07□□□□□ -0.32
TRAFD1-208ENST00000552890 FKBP5Q13451 457 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-208ENST00000552890 GPR162Q16538 588 aa13.07□□□□□ -0.32
TRAFD1-208ENST00000552890 PROSER3Q2NL68 480 aa13.07□□□□□ -0.32
TRAFD1-208ENST00000552890 GRIPAP1Q4V328 841 aa13.07□□□□□ -0.32
TRAFD1-208ENST00000552890 CNKSR1Q969H4 720 aa13.07□□□□□ -0.32
TRAFD1-208ENST00000552890 TMX4Q9H1E5 349 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-208ENST00000552890 RIC1Q4ADV7 1423 aa13.06□□□□□ -0.32
TRAFD1-208ENST00000552890 BRPF1P55201 1214 aaPredicted RBP13.06□□□□□ -0.32
TRAFD1-208ENST00000552890 HLFQ16534 295 aa13.06□□□□□ -0.32
TRAFD1-208ENST00000552890 PRR5LQ6MZQ0 368 aa13.06□□□□□ -0.32
TRAFD1-208ENST00000552890 NLRP3Q96P20 1036 aa13.06□□□□□ -0.32
TRAFD1-208ENST00000552890 METTL22Q9BUU2 404 aaPredicted RBP13.06□□□□□ -0.32
TRAFD1-208ENST00000552890 TRMT112Q9UI30 125 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-208ENST00000552890 SH3TC1Q8TE82 1336 aa13.06□□□□□ -0.32
TRAFD1-208ENST00000552890 KIF16BQ96L93 1317 aa13.06□□□□□ -0.32
TRAFD1-208ENST00000552890 STYK1Q6J9G0 422 aa13.05□□□□□ -0.32
TRAFD1-208ENST00000552890 MASTLQ96GX5 879 aa13.05□□□□□ -0.32
TRAFD1-208ENST00000552890 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
TRAFD1-208ENST00000552890 CWC25Q9NXE8 425 aaPredicted RBP13.05□□□□□ -0.32
TRAFD1-208ENST00000552890 KLRG2A4D1S0 409 aaPredicted RBP13.04□□□□□ -0.32
TRAFD1-208ENST00000552890 PI4KAP2A4QPH2 592 aa13.04□□□□□ -0.32
TRAFD1-208ENST00000552890 ANXA1P04083 346 aa13.04□□□□□ -0.32
TRAFD1-208ENST00000552890 NPR1P16066 1061 aa13.04□□□□□ -0.32
TRAFD1-208ENST00000552890 GPTP24298 496 aa13.04□□□□□ -0.32
TRAFD1-208ENST00000552890 DALRD3Q5D0E6 543 aaKnown RBP13.04□□□□□ -0.32
TRAFD1-208ENST00000552890 SLC10A5Q5PT55 438 aa13.04□□□□□ -0.32
TRAFD1-208ENST00000552890 TMC4Q7Z404 712 aa13.04□□□□□ -0.32
TRAFD1-208ENST00000552890 NLRP10Q86W26 655 aa13.04□□□□□ -0.32
TRAFD1-208ENST00000552890 TTLL6Q8N841 843 aa13.04□□□□□ -0.32
TRAFD1-208ENST00000552890 PI4KAP1Q8N8J0 262 aa13.04□□□□□ -0.32
TRAFD1-208ENST00000552890 LINS1Q8NG48 757 aa13.04□□□□□ -0.32
TRAFD1-208ENST00000552890 DNAAF4Q8WXU2 420 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms