RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 CNKSR1Q969H4 720 aa15.61■□□□□ 0.09
SUPT16H-202ENST00000552829 SCN7AQ01118 1682 aa15.6■□□□□ 0.09
SUPT16H-202ENST00000552829 CANXP27824 592 aaKnown RBP15.6■□□□□ 0.09
SUPT16H-202ENST00000552829 IL13P35225 146 aa15.6■□□□□ 0.09
SUPT16H-202ENST00000552829 DEFB115Q30KQ5 88 aa15.6■□□□□ 0.09
SUPT16H-202ENST00000552829 A0A087WZG4 1122 aa15.59■□□□□ 0.09
SUPT16H-202ENST00000552829 SRGNP10124 158 aa15.59■□□□□ 0.09
SUPT16H-202ENST00000552829 MAP2K1Q02750 393 aaPredicted RBP15.59■□□□□ 0.09
SUPT16H-202ENST00000552829 MLLT1Q03111 559 aaPredicted RBP15.59■□□□□ 0.09
SUPT16H-202ENST00000552829 SOGA3Q5TF21 947 aa15.59■□□□□ 0.09
SUPT16H-202ENST00000552829 PRPF40BQ6NWY9 871 aaKnown RBP15.59■□□□□ 0.09
SUPT16H-202ENST00000552829 CCDC24Q8N4L8 307 aa15.59■□□□□ 0.09
SUPT16H-202ENST00000552829 WDR33Q9C0J8 1336 aaKnown RBP15.59■□□□□ 0.09
SUPT16H-202ENST00000552829 THSD7BQ9C0I4 1608 aa15.58■□□□□ 0.09
SUPT16H-202ENST00000552829 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
SUPT16H-202ENST00000552829 PDE4DIPQ5VU43 2346 aa15.58■□□□□ 0.08
SUPT16H-202ENST00000552829 TNRC18O15417 2968 aaPredicted RBP15.57■□□□□ 0.08
SUPT16H-202ENST00000552829 HACL1Q9UJ83 578 aa15.57■□□□□ 0.08
SUPT16H-202ENST00000552829 ZNF541Q9H0D2 1346 aa15.57■□□□□ 0.08
SUPT16H-202ENST00000552829 STARD3NLO95772 234 aa15.56■□□□□ 0.08
SUPT16H-202ENST00000552829 CNTROBQ8N137 903 aa15.56■□□□□ 0.08
SUPT16H-202ENST00000552829 MASTLQ96GX5 879 aa15.56■□□□□ 0.08
SUPT16H-202ENST00000552829 EPHX2P34913 555 aa15.55■□□□□ 0.08
SUPT16H-202ENST00000552829 EAPPQ56P03 285 aaPredicted RBP15.55■□□□□ 0.08
SUPT16H-202ENST00000552829 MAP1SQ66K74 1059 aaPredicted RBP15.55■□□□□ 0.08
SUPT16H-202ENST00000552829 PNMA8AQ86V59 439 aaPredicted RBP15.55■□□□□ 0.08
SUPT16H-202ENST00000552829 TBC1D2BQ9UPU7 963 aa15.55■□□□□ 0.08
SUPT16H-202ENST00000552829 CAMTA2O94983 1202 aa15.54■□□□□ 0.08
SUPT16H-202ENST00000552829 IL6STP40189 918 aaPredicted RBP15.54■□□□□ 0.08
SUPT16H-202ENST00000552829 CNBD1Q8NA66 436 aa15.54■□□□□ 0.08
SUPT16H-202ENST00000552829 TRPM7Q96QT4 1865 aa15.53■□□□□ 0.08
SUPT16H-202ENST00000552829 KLRG2A4D1S0 409 aaPredicted RBP15.53■□□□□ 0.08
SUPT16H-202ENST00000552829 CCDC85CA6NKD9 419 aa15.53■□□□□ 0.08
SUPT16H-202ENST00000552829 FZD9O00144 591 aa15.53■□□□□ 0.08
SUPT16H-202ENST00000552829 FKBP4Q02790 459 aaKnown RBP eCLIP15.53■□□□□ 0.08
SUPT16H-202ENST00000552829 CCDC93Q567U6 631 aa15.53■□□□□ 0.08
SUPT16H-202ENST00000552829 SETDB2Q96T68 719 aa15.53■□□□□ 0.08
SUPT16H-202ENST00000552829 PANK3Q9H999 370 aa15.53■□□□□ 0.08
SUPT16H-202ENST00000552829 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
SUPT16H-202ENST00000552829 BCORQ6W2J9 1755 aa15.53■□□□□ 0.08
SUPT16H-202ENST00000552829 MTHFSDQ2M296 383 aaKnown RBP15.52■□□□□ 0.08
SUPT16H-202ENST00000552829 ZNF496Q96IT1 587 aaPredicted RBP15.52■□□□□ 0.08
SUPT16H-202ENST00000552829 TEX13AQ9BXU3 409 aaPredicted RBP15.52■□□□□ 0.08
SUPT16H-202ENST00000552829 DDX21Q9NR30 783 aaKnown RBP eCLIP15.52■□□□□ 0.08
SUPT16H-202ENST00000552829 ZNF277Q9NRM2 450 aaPredicted RBP15.52■□□□□ 0.08
SUPT16H-202ENST00000552829 SIPA1L3O60292 1781 aaPredicted RBP15.52■□□□□ 0.07
SUPT16H-202ENST00000552829 HEG1Q9ULI3 1381 aa15.51■□□□□ 0.07
SUPT16H-202ENST00000552829 CASP8AP2Q9UKL3 1982 aa15.51■□□□□ 0.07
SUPT16H-202ENST00000552829 ST5P78524 1137 aa15.51■□□□□ 0.07
SUPT16H-202ENST00000552829 MORC1Q86VD1 984 aa15.51■□□□□ 0.07
SUPT16H-202ENST00000552829 RNF123Q5XPI4 1314 aa15.5■□□□□ 0.07
SUPT16H-202ENST00000552829 NPR1P16066 1061 aa15.5■□□□□ 0.07
SUPT16H-202ENST00000552829 CAPNS2Q96L46 248 aa15.5■□□□□ 0.07
SUPT16H-202ENST00000552829 ABT1Q9ULW3 272 aaKnown RBP15.5■□□□□ 0.07
SUPT16H-202ENST00000552829 SNED1Q8TER0 1413 aa15.5■□□□□ 0.07
SUPT16H-202ENST00000552829 LTBP1Q14766 1721 aa15.49■□□□□ 0.07
SUPT16H-202ENST00000552829 OLFM4Q6UX06 510 aa15.49■□□□□ 0.07
SUPT16H-202ENST00000552829 GPC2Q8N158 579 aa15.49■□□□□ 0.07
SUPT16H-202ENST00000552829 A1BGP04217 495 aa15.48■□□□□ 0.07
SUPT16H-202ENST00000552829 ECE1P42892 770 aa15.48■□□□□ 0.07
SUPT16H-202ENST00000552829 FMR1Q06787 632 aaKnown RBP eCLIP15.48■□□□□ 0.071e-6■□□□□ 10
SUPT16H-202ENST00000552829 CST9Q5W186 159 aa15.48■□□□□ 0.07
SUPT16H-202ENST00000552829 ZNF790Q6PG37 636 aa15.48■□□□□ 0.07
SUPT16H-202ENST00000552829 RTKN2Q8IZC4 609 aa15.48■□□□□ 0.07
SUPT16H-202ENST00000552829 GPR101Q96P66 508 aaPredicted RBP15.48■□□□□ 0.07
SUPT16H-202ENST00000552829 HMOX1P09601 288 aa15.47■□□□□ 0.07
SUPT16H-202ENST00000552829 IARSP41252 1262 aaKnown RBP15.47■□□□□ 0.07
SUPT16H-202ENST00000552829 CLEC4GQ6UXB4 293 aa15.47■□□□□ 0.07
SUPT16H-202ENST00000552829 TTC5Q8N0Z6 440 aa15.47■□□□□ 0.07
SUPT16H-202ENST00000552829 IL17REQ8NFR9 667 aa15.47■□□□□ 0.07
SUPT16H-202ENST00000552829 POLR3GLQ9BT43 218 aa15.47■□□□□ 0.07
SUPT16H-202ENST00000552829 MAP2K2P36507 400 aa15.46■□□□□ 0.07
SUPT16H-202ENST00000552829 CYP4F22Q6NT55 531 aa15.46■□□□□ 0.07
SUPT16H-202ENST00000552829 SYNE4Q8N205 404 aa15.46■□□□□ 0.07
SUPT16H-202ENST00000552829 BEGAINQ9BUH8 593 aa15.46■□□□□ 0.07
SUPT16H-202ENST00000552829 ZNF330Q9Y3S2 320 aaPredicted RBP15.46■□□□□ 0.07
SUPT16H-202ENST00000552829 COL4A5P29400 1685 aa15.46■□□□□ 0.07
SUPT16H-202ENST00000552829 NPHP1O15259 732 aa15.45■□□□□ 0.06
SUPT16H-202ENST00000552829 NBPF5PQ86XG9 351 aaPredicted RBP15.45■□□□□ 0.06
SUPT16H-202ENST00000552829 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
SUPT16H-202ENST00000552829 PSMD1Q99460 953 aa15.45■□□□□ 0.06
SUPT16H-202ENST00000552829 MCOLN1Q9GZU1 580 aa15.45■□□□□ 0.06
SUPT16H-202ENST00000552829 TLL2Q9Y6L7 1015 aa15.45■□□□□ 0.06
SUPT16H-202ENST00000552829 RGL2O15211 777 aa15.43■□□□□ 0.06
SUPT16H-202ENST00000552829 CA12O43570 354 aa15.43■□□□□ 0.06
SUPT16H-202ENST00000552829 EPS15P42566 896 aa15.43■□□□□ 0.06
SUPT16H-202ENST00000552829 SCNN1DP51172 638 aa15.43■□□□□ 0.06
SUPT16H-202ENST00000552829 FMNL2Q96PY5 1086 aa15.43■□□□□ 0.06
SUPT16H-202ENST00000552829 TSKSQ9UJT2 592 aa15.43■□□□□ 0.06
SUPT16H-202ENST00000552829 TRAF5O00463 557 aa15.42■□□□□ 0.06
SUPT16H-202ENST00000552829 AOC2O75106 756 aa15.42■□□□□ 0.06
SUPT16H-202ENST00000552829 KCNQ3O43525 872 aa15.41■□□□□ 0.06
SUPT16H-202ENST00000552829 ALDH1B1P30837 517 aa15.41■□□□□ 0.06
SUPT16H-202ENST00000552829 TEFQ10587 303 aa15.41■□□□□ 0.06
SUPT16H-202ENST00000552829 TPTE2Q6XPS3 522 aa15.41■□□□□ 0.06
SUPT16H-202ENST00000552829 USP50Q70EL3 339 aaPredicted RBP15.41■□□□□ 0.06
SUPT16H-202ENST00000552829 JDP2Q8WYK2 163 aa15.41■□□□□ 0.06
SUPT16H-202ENST00000552829 USP16Q9Y5T5 823 aa15.41■□□□□ 0.06
SUPT16H-202ENST00000552829 CEMIPQ8WUJ3 1361 aa15.4■□□□□ 0.06
SUPT16H-202ENST00000552829 CACNB1Q02641 598 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms