RNA–Protein interactions for RNA: ENST00000552818.1

PFKM-229, Transcript of phosphofructokinase, muscle, humanhuman

TSL 2

Gene PFKM, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-229ENST00000552818 MS4A1P11836 297 aa12.17□□□□□ -0.46
PFKM-229ENST00000552818 PIGBQ92521 554 aa12.17□□□□□ -0.46
PFKM-229ENST00000552818 ANKRD36CQ5JPF3 1778 aa12.17□□□□□ -0.46
PFKM-229ENST00000552818 EXOC5O00471 708 aa12.16□□□□□ -0.46
PFKM-229ENST00000552818 EIF2S2P20042 333 aaKnown RBP12.16□□□□□ -0.46
PFKM-229ENST00000552818 SKAP1Q86WV1 359 aa12.16□□□□□ -0.46
PFKM-229ENST00000552818 USP21Q9UK80 565 aa12.16□□□□□ -0.46
PFKM-229ENST00000552818 DDX19BQ9UMR2 479 aa12.16□□□□□ -0.46
PFKM-229ENST00000552818 USP16Q9Y5T5 823 aa12.16□□□□□ -0.46
PFKM-229ENST00000552818 AAMPQ13685 434 aa12.15□□□□□ -0.46
PFKM-229ENST00000552818 DDB1Q16531 1140 aa12.15□□□□□ -0.46
PFKM-229ENST00000552818 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
PFKM-229ENST00000552818 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
PFKM-229ENST00000552818 ARHGEF1Q92888 912 aaKnown RBP12.15□□□□□ -0.46
PFKM-229ENST00000552818 SLC4A9Q96Q91 983 aa12.15□□□□□ -0.46
PFKM-229ENST00000552818 STK31Q9BXU1 1019 aa12.15□□□□□ -0.46
PFKM-229ENST00000552818 ATG3Q9NT62 314 aa12.15□□□□□ -0.46
PFKM-229ENST00000552818 ASAP1Q9ULH1 1129 aa12.15□□□□□ -0.46
PFKM-229ENST00000552818 NUP98P52948 1817 aa12.15□□□□□ -0.46
PFKM-229ENST00000552818 FMNL2Q96PY5 1086 aa12.14□□□□□ -0.47
PFKM-229ENST00000552818 NBPF26B4DH59 902 aa12.13□□□□□ -0.47
PFKM-229ENST00000552818 SNRPA1P09661 255 aaKnown RBP12.13□□□□□ -0.47
PFKM-229ENST00000552818 NBPF14Q5TI25 921 aa12.13□□□□□ -0.47
PFKM-229ENST00000552818 NBPF10Q6P3W6 841 aaKnown RBP12.13□□□□□ -0.47
PFKM-229ENST00000552818 SIRT2Q8IXJ6 389 aa12.13□□□□□ -0.47
PFKM-229ENST00000552818 NBPF15Q8N660 670 aa12.13□□□□□ -0.47
PFKM-229ENST00000552818 DDX21Q9NR30 783 aaKnown RBP eCLIP12.13□□□□□ -0.47
PFKM-229ENST00000552818 TMOD3Q9NYL9 352 aa12.13□□□□□ -0.47
PFKM-229ENST00000552818 DBF4Q9UBU7 674 aaPredicted RBP12.13□□□□□ -0.47
PFKM-229ENST00000552818 BCORQ6W2J9 1755 aa12.13□□□□□ -0.47
PFKM-229ENST00000552818 TUBGCP6Q96RT7 1819 aa12.12□□□□□ -0.47
PFKM-229ENST00000552818 PIP4K2AP48426 406 aaPredicted RBP12.12□□□□□ -0.47
PFKM-229ENST00000552818 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
PFKM-229ENST00000552818 FKBP5Q13451 457 aaPredicted RBP12.12□□□□□ -0.47
PFKM-229ENST00000552818 CENPQQ7L2Z9 268 aaPredicted RBP12.12□□□□□ -0.47
PFKM-229ENST00000552818 REM2Q8IYK8 340 aaPredicted RBP12.12□□□□□ -0.47
PFKM-229ENST00000552818 TTC5Q8N0Z6 440 aa12.12□□□□□ -0.47
PFKM-229ENST00000552818 MEIS3Q99687 375 aa12.12□□□□□ -0.47
PFKM-229ENST00000552818 MFRPQ9BY79 579 aa12.12□□□□□ -0.47
PFKM-229ENST00000552818 C1orf115Q9H7X2 142 aa12.12□□□□□ -0.47
PFKM-229ENST00000552818 CCDC9Q9Y3X0 531 aaKnown RBP12.12□□□□□ -0.47
PFKM-229ENST00000552818 CASZ1Q86V15 1759 aa12.11□□□□□ -0.47
PFKM-229ENST00000552818 SOCS7O14512 581 aa12.11□□□□□ -0.47
PFKM-229ENST00000552818 ONECUT3O60422 494 aaPredicted RBP12.11□□□□□ -0.47
PFKM-229ENST00000552818 PRIM1P49642 420 aaKnown RBP12.11□□□□□ -0.47
PFKM-229ENST00000552818 GJD4Q96KN9 370 aaPredicted RBP12.11□□□□□ -0.47
PFKM-229ENST00000552818 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
PFKM-229ENST00000552818 SLC24A3Q9HC58 644 aa12.11□□□□□ -0.47
PFKM-229ENST00000552818 PI4KAP2A4QPH2 592 aa12.1□□□□□ -0.47
PFKM-229ENST00000552818 PTCD1O75127 700 aaKnown RBP12.1□□□□□ -0.47
PFKM-229ENST00000552818 HDAC1Q13547 482 aaPredicted RBP12.1□□□□□ -0.47
PFKM-229ENST00000552818 BEND3Q5T5X7 828 aa12.1□□□□□ -0.47
PFKM-229ENST00000552818 ILDR2Q71H61 639 aa12.1□□□□□ -0.47
PFKM-229ENST00000552818 PTF1AQ7RTS3 328 aa12.1□□□□□ -0.47
PFKM-229ENST00000552818 PI4KAP1Q8N8J0 262 aa12.1□□□□□ -0.47
PFKM-229ENST00000552818 ERBB4Q15303 1308 aa12.1□□□□□ -0.47
PFKM-229ENST00000552818 TESPA1A2RU30 521 aaPredicted RBP12.09□□□□□ -0.47
PFKM-229ENST00000552818 KCNQ2O43526 872 aa12.09□□□□□ -0.47
PFKM-229ENST00000552818 CCT4P50991 539 aaKnown RBP12.09□□□□□ -0.47
PFKM-229ENST00000552818 MEX3CQ5U5Q3 659 aaKnown RBP12.09□□□□□ -0.47
PFKM-229ENST00000552818 DNAAF4Q8WXU2 420 aa12.09□□□□□ -0.47
PFKM-229ENST00000552818 ACSBG1Q96GR2 724 aa12.09□□□□□ -0.47
PFKM-229ENST00000552818 HYPKQ9NX55 129 aa12.09□□□□□ -0.47
PFKM-229ENST00000552818 IBTKQ9P2D0 1353 aaPredicted RBP12.08□□□□□ -0.48
PFKM-229ENST00000552818 E2F4Q16254 413 aa12.08□□□□□ -0.48
PFKM-229ENST00000552818 SLC4A10Q6U841 1118 aa12.08□□□□□ -0.48
PFKM-229ENST00000552818 KSR2Q6VAB6 950 aa12.08□□□□□ -0.48
PFKM-229ENST00000552818 DNAJC10Q8IXB1 793 aa12.08□□□□□ -0.48
PFKM-229ENST00000552818 XAGE3Q8WTP9 111 aa12.08□□□□□ -0.48
PFKM-229ENST00000552818 C4AP0C0L4 1744 aa12.08□□□□□ -0.48
PFKM-229ENST00000552818 C4BP0C0L5 1744 aa12.08□□□□□ -0.48
PFKM-229ENST00000552818 MYH3P11055 1940 aa12.07□□□□□ -0.48
PFKM-229ENST00000552818 SCN7AQ01118 1682 aa12.07□□□□□ -0.48
PFKM-229ENST00000552818 SEMA3EO15041 775 aa12.07□□□□□ -0.48
PFKM-229ENST00000552818 A1BGP04217 495 aa12.07□□□□□ -0.48
PFKM-229ENST00000552818 MYL6BP14649 208 aa12.07□□□□□ -0.48
PFKM-229ENST00000552818 SMC5Q8IY18 1101 aa12.07□□□□□ -0.48
PFKM-229ENST00000552818 CHMP4AQ9BY43 222 aa12.07□□□□□ -0.48
PFKM-229ENST00000552818 USP44Q9H0E7 712 aa12.07□□□□□ -0.48
PFKM-229ENST00000552818 TRPC5Q9UL62 973 aaPredicted RBP12.07□□□□□ -0.48
PFKM-229ENST00000552818 PCDHB8Q9UN66 801 aa12.07□□□□□ -0.48
PFKM-229ENST00000552818 MAP3K2Q9Y2U5 619 aa12.07□□□□□ -0.48
PFKM-229ENST00000552818 PCDHB13Q9Y5F0 798 aa12.07□□□□□ -0.48
PFKM-229ENST00000552818 TNS1Q9HBL0 1735 aaKnown RBP12.06□□□□□ -0.48
PFKM-229ENST00000552818 IGKV5-2P06315 115 aa12.06□□□□□ -0.48
PFKM-229ENST00000552818 CEP85Q6P2H3 762 aa12.06□□□□□ -0.48
PFKM-229ENST00000552818 COPS6Q7L5N1 327 aa12.06□□□□□ -0.48
PFKM-229ENST00000552818 TSPYL2Q9H2G4 693 aaPredicted RBP12.06□□□□□ -0.48
PFKM-229ENST00000552818 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
PFKM-229ENST00000552818 EP400Q96L91 3159 aa12.06□□□□□ -0.48
PFKM-229ENST00000552818 PALLDQ8WX93 1383 aa12.05□□□□□ -0.48
PFKM-229ENST00000552818 PPP1R37O75864 691 aa12.05□□□□□ -0.48
PFKM-229ENST00000552818 CYP19A1P11511 503 aaPredicted RBP12.05□□□□□ -0.48
PFKM-229ENST00000552818 FAM182BQ5T319 152 aa12.05□□□□□ -0.48
PFKM-229ENST00000552818 TTLL7Q6ZT98 887 aa12.05□□□□□ -0.48
PFKM-229ENST00000552818 ANKRD44Q8N8A2 993 aa12.05□□□□□ -0.48
PFKM-229ENST00000552818 LAMB2P55268 1798 aa12.05□□□□□ -0.48
PFKM-229ENST00000552818 AIMP1Q12904 312 aaKnown RBP12.04□□□□□ -0.48
PFKM-229ENST00000552818 ITPK1Q13572 414 aa12.04□□□□□ -0.48
PFKM-229ENST00000552818 CWF19L2Q2TBE0 894 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms