RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 FAM177BA6PVY3 158 aa13.2□□□□□ -0.3
LINC00661-207ENST00000552685 NBPF26B4DH59 902 aa13.2□□□□□ -0.3
LINC00661-207ENST00000552685 SNRPA1P09661 255 aaKnown RBP13.2□□□□□ -0.3
LINC00661-207ENST00000552685 PDE6BP35913 854 aa13.2□□□□□ -0.3
LINC00661-207ENST00000552685 NBPF10Q6P3W6 841 aaKnown RBP13.2□□□□□ -0.3
LINC00661-207ENST00000552685 NBPF15Q8N660 670 aa13.2□□□□□ -0.3
LINC00661-207ENST00000552685 SLX4Q8IY92 1834 aa13.2□□□□□ -0.3
LINC00661-207ENST00000552685 FER1L6Q2WGJ9 1857 aa13.19□□□□□ -0.3
LINC00661-207ENST00000552685 ST5P78524 1137 aa13.19□□□□□ -0.3
LINC00661-207ENST00000552685 THUMPD2Q9BTF0 503 aaKnown RBP13.19□□□□□ -0.3
LINC00661-207ENST00000552685 DLG5Q8TDM6 1919 aa13.19□□□□□ -0.3
LINC00661-207ENST00000552685 GLTPD2A6NH11 291 aa13.18□□□□□ -0.3
LINC00661-207ENST00000552685 NBPF5PQ86XG9 351 aaPredicted RBP13.18□□□□□ -0.3
LINC00661-207ENST00000552685 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
LINC00661-207ENST00000552685 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
LINC00661-207ENST00000552685 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
LINC00661-207ENST00000552685 SRGNP10124 158 aa13.17□□□□□ -0.3
LINC00661-207ENST00000552685 TAF7Q15545 349 aaPredicted RBP13.17□□□□□ -0.3
LINC00661-207ENST00000552685 HLFQ16534 295 aa13.17□□□□□ -0.3
LINC00661-207ENST00000552685 PRPF40BQ6NWY9 871 aaKnown RBP13.17□□□□□ -0.3
LINC00661-207ENST00000552685 NGEFQ8N5V2 710 aa13.17□□□□□ -0.3
LINC00661-207ENST00000552685 HTATSF1O43719 755 aaKnown RBP13.16□□□□□ -0.3
LINC00661-207ENST00000552685 VEGFAP15692 232 aaPredicted RBP13.16□□□□□ -0.3
LINC00661-207ENST00000552685 ERFEQ4G0M1 354 aa13.16□□□□□ -0.3
LINC00661-207ENST00000552685 STYK1Q6J9G0 422 aa13.16□□□□□ -0.3
LINC00661-207ENST00000552685 OLFM4Q6UX06 510 aa13.16□□□□□ -0.3
LINC00661-207ENST00000552685 SMC1BQ8NDV3 1235 aa13.16□□□□□ -0.3
LINC00661-207ENST00000552685 MASTLQ96GX5 879 aa13.16□□□□□ -0.3
LINC00661-207ENST00000552685 PDZRN3Q9UPQ7 1066 aa13.16□□□□□ -0.3
LINC00661-207ENST00000552685 NIP7Q9Y221 180 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00661-207ENST00000552685 DICER1Q9UPY3 1922 aaKnown RBP13.15□□□□□ -0.3
LINC00661-207ENST00000552685 CNKSR1Q969H4 720 aa13.15□□□□□ -0.3
LINC00661-207ENST00000552685 PLEKHF1Q96S99 279 aa13.15□□□□□ -0.3
LINC00661-207ENST00000552685 TAOK3Q9H2K8 898 aa13.15□□□□□ -0.3
LINC00661-207ENST00000552685 ZNF652Q9Y2D9 606 aa13.15□□□□□ -0.3
LINC00661-207ENST00000552685 LAMB4A4D0S4 1761 aa13.15□□□□□ -0.31
LINC00661-207ENST00000552685 CLEC4GQ6UXB4 293 aa13.14□□□□□ -0.31
LINC00661-207ENST00000552685 KDM3BQ7LBC6 1761 aa13.14□□□□□ -0.31
LINC00661-207ENST00000552685 ARFGEF2Q9Y6D5 1785 aa13.14□□□□□ -0.31
LINC00661-207ENST00000552685 HSPA1AP0DMV8 641 aaKnown RBP13.13□□□□□ -0.31
LINC00661-207ENST00000552685 HSPA1BP0DMV9 641 aaKnown RBP13.13□□□□□ -0.31
LINC00661-207ENST00000552685 NFE2L2Q16236 605 aa13.13□□□□□ -0.31
LINC00661-207ENST00000552685 TTLL7Q6ZT98 887 aa13.13□□□□□ -0.31
LINC00661-207ENST00000552685 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
LINC00661-207ENST00000552685 CAPN15O75808 1086 aa13.12□□□□□ -0.31
LINC00661-207ENST00000552685 DDNO94850 711 aaPredicted RBP13.12□□□□□ -0.31
LINC00661-207ENST00000552685 NEFMP07197 916 aa13.12□□□□□ -0.31
LINC00661-207ENST00000552685 MYL6BP14649 208 aa13.12□□□□□ -0.31
LINC00661-207ENST00000552685 NPR1P16066 1061 aa13.12□□□□□ -0.31
LINC00661-207ENST00000552685 EIF4A1P60842 406 aaKnown RBP13.12□□□□□ -0.31
LINC00661-207ENST00000552685 DPY19L2Q6NUT2 758 aa13.12□□□□□ -0.31
LINC00661-207ENST00000552685 NUTM1Q86Y26 1132 aa13.12□□□□□ -0.31
LINC00661-207ENST00000552685 C7orf43Q8WVR3 580 aa13.12□□□□□ -0.31
LINC00661-207ENST00000552685 LTBP3Q9NS15 1303 aa13.12□□□□□ -0.31
LINC00661-207ENST00000552685 ABCC12Q96J65 1359 aa13.11□□□□□ -0.31
LINC00661-207ENST00000552685 GPTP24298 496 aa13.11□□□□□ -0.31
LINC00661-207ENST00000552685 TPTE2Q6XPS3 522 aa13.11□□□□□ -0.31
LINC00661-207ENST00000552685 SLC51AQ86UW1 340 aa13.11□□□□□ -0.31
LINC00661-207ENST00000552685 ZNF277Q9NRM2 450 aaPredicted RBP13.11□□□□□ -0.31
LINC00661-207ENST00000552685 ADAMTSL1Q8N6G6 1762 aa13.11□□□□□ -0.31
LINC00661-207ENST00000552685 SNED1Q8TER0 1413 aa13.11□□□□□ -0.31
LINC00661-207ENST00000552685 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
LINC00661-207ENST00000552685 GTF2E1P29083 439 aaPredicted RBP13.1□□□□□ -0.31
LINC00661-207ENST00000552685 CCDC93Q567U6 631 aa13.1□□□□□ -0.31
LINC00661-207ENST00000552685 TNS4Q8IZW8 715 aa13.1□□□□□ -0.31
LINC00661-207ENST00000552685 PNISRQ8TF01 805 aaKnown RBP13.1□□□□□ -0.31
LINC00661-207ENST00000552685 ZBTB3Q9H5J0 574 aa13.1□□□□□ -0.31
LINC00661-207ENST00000552685 NUP98P52948 1817 aa13.1□□□□□ -0.31
LINC00661-207ENST00000552685 MAPK8IP3Q9UPT6 1336 aa13.1□□□□□ -0.31
LINC00661-207ENST00000552685 COL4A5P29400 1685 aa13.09□□□□□ -0.31
LINC00661-207ENST00000552685 SOGA3Q5TF21 947 aa13.09□□□□□ -0.31
LINC00661-207ENST00000552685 MAP3K15Q6ZN16 1313 aa13.09□□□□□ -0.31
LINC00661-207ENST00000552685 ZNF541Q9H0D2 1346 aa13.09□□□□□ -0.31
LINC00661-207ENST00000552685 FKBP4Q02790 459 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC00661-207ENST00000552685 KIF6Q6ZMV9 814 aa13.08□□□□□ -0.32
LINC00661-207ENST00000552685 UBN2Q6ZU65 1347 aa13.08□□□□□ -0.32
LINC00661-207ENST00000552685 ERVV-1B6SEH8 477 aa13.07□□□□□ -0.32
LINC00661-207ENST00000552685 ANXA1P04083 346 aa13.07□□□□□ -0.32
LINC00661-207ENST00000552685 RIPK4P57078 832 aa13.07□□□□□ -0.32
LINC00661-207ENST00000552685 SUSD4Q5VX71 490 aa13.07□□□□□ -0.32
LINC00661-207ENST00000552685 TSPYL4Q9UJ04 414 aa13.07□□□□□ -0.32
LINC00661-207ENST00000552685 PASKQ96RG2 1323 aa13.07□□□□□ -0.32
LINC00661-207ENST00000552685 TCERG1O14776 1098 aaKnown RBP13.06□□□□□ -0.32
LINC00661-207ENST00000552685 RGL2O15211 777 aa13.06□□□□□ -0.32
LINC00661-207ENST00000552685 EIF2S2P20042 333 aaKnown RBP13.06□□□□□ -0.32
LINC00661-207ENST00000552685 PROSER3Q2NL68 480 aa13.06□□□□□ -0.32
LINC00661-207ENST00000552685 CHADLQ6NUI6 762 aa13.06□□□□□ -0.32
LINC00661-207ENST00000552685 C3orf67Q6ZVT6 689 aa13.06□□□□□ -0.32
LINC00661-207ENST00000552685 CCDC146Q8IYE0 955 aa13.06□□□□□ -0.32
LINC00661-207ENST00000552685 SYNE4Q8N205 404 aa13.06□□□□□ -0.32
LINC00661-207ENST00000552685 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
LINC00661-207ENST00000552685 LTBP1Q14766 1721 aa13.05□□□□□ -0.32
LINC00661-207ENST00000552685 ALDH1B1P30837 517 aa13.05□□□□□ -0.32
LINC00661-207ENST00000552685 NYXQ9GZU5 481 aa13.05□□□□□ -0.32
LINC00661-207ENST00000552685 MKRN1Q9UHC7 482 aaKnown RBP13.05□□□□□ -0.32
LINC00661-207ENST00000552685 FOXN1O15353 648 aa13.04□□□□□ -0.32
LINC00661-207ENST00000552685 NTSR2O95665 410 aa13.04□□□□□ -0.32
LINC00661-207ENST00000552685 IARSP41252 1262 aaKnown RBP13.04□□□□□ -0.32
LINC00661-207ENST00000552685 DDX10Q13206 875 aaKnown RBP13.04□□□□□ -0.32
LINC00661-207ENST00000552685 PDIA6Q15084 440 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms