RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 CNGB1Q14028 1251 aaPredicted RBP21.48■■□□□ 1.03
CALCOCO1-220ENST00000552282 RRAGCQ9HB90 399 aa21.48■■□□□ 1.03
CALCOCO1-220ENST00000552282 CACNA1SQ13698 1873 aa21.47■■□□□ 1.03
CALCOCO1-220ENST00000552282 PCNTO95613 3336 aa21.47■■□□□ 1.03
CALCOCO1-220ENST00000552282 ST5P78524 1137 aa21.47■■□□□ 1.03
CALCOCO1-220ENST00000552282 SMC1BQ8NDV3 1235 aa21.47■■□□□ 1.03
CALCOCO1-220ENST00000552282 CNKSR1Q969H4 720 aa21.47■■□□□ 1.03
CALCOCO1-220ENST00000552282 ZNF652Q9Y2D9 606 aa21.47■■□□□ 1.03
CALCOCO1-220ENST00000552282 ZNF330Q9Y3S2 320 aaPredicted RBP21.47■■□□□ 1.03
CALCOCO1-220ENST00000552282 PRAMEF22A3QJZ6 481 aa21.46■■□□□ 1.03
CALCOCO1-220ENST00000552282 VEGFAP15692 232 aaPredicted RBP21.46■■□□□ 1.03
CALCOCO1-220ENST00000552282 TAF7Q15545 349 aaPredicted RBP21.46■■□□□ 1.03
CALCOCO1-220ENST00000552282 SOGA3Q5TF21 947 aa21.46■■□□□ 1.03
CALCOCO1-220ENST00000552282 JMYQ8N9B5 988 aa21.46■■□□□ 1.03
CALCOCO1-220ENST00000552282 NBPF26B4DH59 902 aa21.45■■□□□ 1.02
CALCOCO1-220ENST00000552282 NBPF10Q6P3W6 841 aaKnown RBP21.45■■□□□ 1.02
CALCOCO1-220ENST00000552282 NBPF15Q8N660 670 aa21.45■■□□□ 1.02
CALCOCO1-220ENST00000552282 MASTLQ96GX5 879 aa21.45■■□□□ 1.02
CALCOCO1-220ENST00000552282 ZNF622Q969S3 477 aaKnown RBP eCLIP21.44■■□□□ 1.022e-7■□□□□ 9.6
CALCOCO1-220ENST00000552282 KLRG1Q96E93 195 aa21.44■■□□□ 1.02
CALCOCO1-220ENST00000552282 PLEKHF1Q96S99 279 aa21.44■■□□□ 1.02
CALCOCO1-220ENST00000552282 RIC1Q4ADV7 1423 aa21.44■■□□□ 1.02
CALCOCO1-220ENST00000552282 C21orf2O43822 256 aa21.43■■□□□ 1.02
CALCOCO1-220ENST00000552282 DCTN1Q14203 1278 aa21.43■■□□□ 1.02
CALCOCO1-220ENST00000552282 PRPF40BQ6NWY9 871 aaKnown RBP21.43■■□□□ 1.02
CALCOCO1-220ENST00000552282 PNISRQ8TF01 805 aaKnown RBP21.43■■□□□ 1.02
CALCOCO1-220ENST00000552282 C7orf43Q8WVR3 580 aa21.43■■□□□ 1.02
CALCOCO1-220ENST00000552282 POTECB2RU33 542 aa21.42■■□□□ 1.02
CALCOCO1-220ENST00000552282 TAOK3Q9H2K8 898 aa21.42■■□□□ 1.02
CALCOCO1-220ENST00000552282 IBTKQ9P2D0 1353 aaPredicted RBP21.41■■□□□ 1.02
CALCOCO1-220ENST00000552282 SNED1Q8TER0 1413 aa21.4■■□□□ 1.02
CALCOCO1-220ENST00000552282 PIP4K2AP48426 406 aaPredicted RBP21.4■■□□□ 1.02
CALCOCO1-220ENST00000552282 DPY19L2Q6NUT2 758 aa21.4■■□□□ 1.02
CALCOCO1-220ENST00000552282 NBPF5PQ86XG9 351 aaPredicted RBP21.4■■□□□ 1.02
CALCOCO1-220ENST00000552282 CCDC24Q8N4L8 307 aa21.4■■□□□ 1.02
CALCOCO1-220ENST00000552282 NUP98P52948 1817 aa21.4■■□□□ 1.02
CALCOCO1-220ENST00000552282 NPR1P16066 1061 aa21.39■■□□□ 1.01
CALCOCO1-220ENST00000552282 ERFEQ4G0M1 354 aa21.39■■□□□ 1.01
CALCOCO1-220ENST00000552282 TPTE2Q6XPS3 522 aa21.39■■□□□ 1.01
CALCOCO1-220ENST00000552282 SCN4AP35499 1836 aa21.39■■□□□ 1.01
CALCOCO1-220ENST00000552282 ERVV-1B6SEH8 477 aa21.38■■□□□ 1.01
CALCOCO1-220ENST00000552282 NEFMP07197 916 aa21.38■■□□□ 1.01
CALCOCO1-220ENST00000552282 NFE2L2Q16236 605 aa21.38■■□□□ 1.01
CALCOCO1-220ENST00000552282 ERBB4Q15303 1308 aa21.37■■□□□ 1.01
CALCOCO1-220ENST00000552282 NPHP1O15259 732 aa21.37■■□□□ 1.01
CALCOCO1-220ENST00000552282 NIP7Q9Y221 180 aaKnown RBP eCLIP21.37■■□□□ 1.01
CALCOCO1-220ENST00000552282 EIF4A1P60842 406 aaKnown RBP21.36■■□□□ 1.01
CALCOCO1-220ENST00000552282 CRY2Q49AN0 593 aa21.36■■□□□ 1.01
CALCOCO1-220ENST00000552282 CCDC93Q567U6 631 aa21.36■■□□□ 1.01
CALCOCO1-220ENST00000552282 PNNQ9H307 717 aaKnown RBP21.36■■□□□ 1.01
CALCOCO1-220ENST00000552282 L3MBTL3Q96JM7 780 aaPredicted RBP21.35■■□□□ 1.01
CALCOCO1-220ENST00000552282 MAP3K15Q6ZN16 1313 aa21.34■■□□□ 1.01
CALCOCO1-220ENST00000552282 HTRA3P83110 453 aa21.34■■□□□ 1.01
CALCOCO1-220ENST00000552282 HLFQ16534 295 aa21.34■■□□□ 1.01
CALCOCO1-220ENST00000552282 FKBP4Q02790 459 aaKnown RBP eCLIP21.33■■□□□ 1.01
CALCOCO1-220ENST00000552282 NYXQ9GZU5 481 aa21.33■■□□□ 1.01
CALCOCO1-220ENST00000552282 ADAMTSL1Q8N6G6 1762 aa21.33■■□□□ 1
CALCOCO1-220ENST00000552282 BABAM1Q9NWV8 329 aa21.32■■□□□ 1
CALCOCO1-220ENST00000552282 MIS18AQ9NYP9 233 aa21.32■■□□□ 1
CALCOCO1-220ENST00000552282 ZNF219Q9P2Y4 722 aaPredicted RBP21.32■■□□□ 1
CALCOCO1-220ENST00000552282 ABCC12Q96J65 1359 aa21.32■■□□□ 1
CALCOCO1-220ENST00000552282 ALDH1B1P30837 517 aa21.31■■□□□ 1
CALCOCO1-220ENST00000552282 LRP10Q7Z4F1 713 aa21.3■■□□□ 1
CALCOCO1-220ENST00000552282 RTKN2Q8IZC4 609 aa21.3■■□□□ 1
CALCOCO1-220ENST00000552282 MAPK8IP3Q9UPT6 1336 aa21.29■■□□□ 1
CALCOCO1-220ENST00000552282 IQCA1LA6NCM1 817 aa21.29■■□□□ 1
CALCOCO1-220ENST00000552282 HOXA10P31260 410 aaPredicted RBP21.29■■□□□ 1
CALCOCO1-220ENST00000552282 PSMD1Q99460 953 aa21.29■■□□□ 1
CALCOCO1-220ENST00000552282 DDNO94850 711 aaPredicted RBP21.28■■□□□ 1
CALCOCO1-220ENST00000552282 RALBP1Q15311 655 aa21.28■■□□□ 1
CALCOCO1-220ENST00000552282 CC2D2BQ6DHV5 1058 aa21.28■■□□□ 1
CALCOCO1-220ENST00000552282 CHADLQ6NUI6 762 aa21.28■■□□□ 1
CALCOCO1-220ENST00000552282 ANKRD36CQ5JPF3 1778 aa21.28■■□□□ 1
CALCOCO1-220ENST00000552282 UBN2Q6ZU65 1347 aa21.28■■□□□ 1
CALCOCO1-220ENST00000552282 GRIPAP1Q4V328 841 aa21.27■■□□□ 1
CALCOCO1-220ENST00000552282 GIGYF2Q6Y7W6 1299 aaKnown RBP21.27■■□□□ 1
CALCOCO1-220ENST00000552282 KIF6Q6ZMV9 814 aa21.27■■□□□ 1
CALCOCO1-220ENST00000552282 TTLL7Q6ZT98 887 aa21.27■■□□□ 1
CALCOCO1-220ENST00000552282 ZNF34Q8IZ26 560 aa21.27■■□□□ 1
CALCOCO1-220ENST00000552282 THUMPD2Q9BTF0 503 aaKnown RBP21.26■□□□□ 0.99
CALCOCO1-220ENST00000552282 FZD9O00144 591 aa21.25■□□□□ 0.99
CALCOCO1-220ENST00000552282 LDHDQ86WU2 507 aa21.25■□□□□ 0.99
CALCOCO1-220ENST00000552282 CREBZFQ9NS37 354 aa21.25■□□□□ 0.99
CALCOCO1-220ENST00000552282 RNF123Q5XPI4 1314 aa21.25■□□□□ 0.99
CALCOCO1-220ENST00000552282 PASKQ96RG2 1323 aa21.25■□□□□ 0.99
CALCOCO1-220ENST00000552282 NTSR2O95665 410 aa21.24■□□□□ 0.99
CALCOCO1-220ENST00000552282 PDIA6Q15084 440 aa21.24■□□□□ 0.99
CALCOCO1-220ENST00000552282 PARP10Q53GL7 1025 aa21.24■□□□□ 0.99
CALCOCO1-220ENST00000552282 TAF1DQ9H5J8 278 aaPredicted RBP21.24■□□□□ 0.99
CALCOCO1-220ENST00000552282 GTF2E1P29083 439 aaPredicted RBP21.23■□□□□ 0.99
CALCOCO1-220ENST00000552282 IARSP41252 1262 aaKnown RBP21.23■□□□□ 0.99
CALCOCO1-220ENST00000552282 LMOD3Q0VAK6 560 aa21.23■□□□□ 0.99
CALCOCO1-220ENST00000552282 CRAMP1Q96RY5 1269 aa21.23■□□□□ 0.99
CALCOCO1-220ENST00000552282 ZNF277Q9NRM2 450 aaPredicted RBP21.23■□□□□ 0.99
CALCOCO1-220ENST00000552282 ZNF541Q9H0D2 1346 aa21.23■□□□□ 0.99
CALCOCO1-220ENST00000552282 COL4A5P29400 1685 aa21.22■□□□□ 0.99
CALCOCO1-220ENST00000552282 POTEIP0CG38 1075 aa21.22■□□□□ 0.99
CALCOCO1-220ENST00000552282 POTEJP0CG39 1038 aa21.22■□□□□ 0.99
CALCOCO1-220ENST00000552282 OLFM4Q6UX06 510 aa21.22■□□□□ 0.99
CALCOCO1-220ENST00000552282 NUTM1Q86Y26 1132 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms