RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 STYK1Q6J9G0 422 aa21.97■■□□□ 1.11
RAB5C-209ENST00000552162 PRPF40BQ6NWY9 871 aaKnown RBP21.97■■□□□ 1.11
RAB5C-209ENST00000552162 SRGNP10124 158 aa21.96■■□□□ 1.11
RAB5C-209ENST00000552162 CHADLQ6NUI6 762 aa21.96■■□□□ 1.11
RAB5C-209ENST00000552162 DZIP3Q86Y13 1208 aaKnown RBP21.96■■□□□ 1.11
RAB5C-209ENST00000552162 NPC1L1Q9UHC9 1359 aa21.96■■□□□ 1.11
RAB5C-209ENST00000552162 DDNO94850 711 aaPredicted RBP21.95■■□□□ 1.1
RAB5C-209ENST00000552162 POTEIP0CG38 1075 aa21.95■■□□□ 1.1
RAB5C-209ENST00000552162 POTEJP0CG39 1038 aa21.95■■□□□ 1.1
RAB5C-209ENST00000552162 CNGB1Q14028 1251 aaPredicted RBP21.95■■□□□ 1.1
RAB5C-209ENST00000552162 SOGA3Q5TF21 947 aa21.95■■□□□ 1.1
RAB5C-209ENST00000552162 MASTLQ96GX5 879 aa21.95■■□□□ 1.1
RAB5C-209ENST00000552162 CREBZFQ9NS37 354 aa21.95■■□□□ 1.1
RAB5C-209ENST00000552162 BTBD11A6QL63 1104 aa21.94■■□□□ 1.1
RAB5C-209ENST00000552162 KCNQ3O43525 872 aa21.94■■□□□ 1.1
RAB5C-209ENST00000552162 SCN4AP35499 1836 aa21.92■■□□□ 1.1
RAB5C-209ENST00000552162 PIP4K2AP48426 406 aaPredicted RBP21.92■■□□□ 1.1
RAB5C-209ENST00000552162 PHACTR3Q96KR7 559 aa21.92■■□□□ 1.1
RAB5C-209ENST00000552162 MKRN1Q9UHC7 482 aaKnown RBP21.92■■□□□ 1.1
RAB5C-209ENST00000552162 PRKAR2BP31323 418 aa21.91■■□□□ 1.1
RAB5C-209ENST00000552162 NBPF5PQ86XG9 351 aaPredicted RBP21.91■■□□□ 1.1
RAB5C-209ENST00000552162 USP16Q9Y5T5 823 aa21.91■■□□□ 1.1
RAB5C-209ENST00000552162 IQCA1LA6NCM1 817 aa21.9■■□□□ 1.1
RAB5C-209ENST00000552162 RSPH6AQ9H0K4 717 aa21.9■■□□□ 1.1
RAB5C-209ENST00000552162 PRAMEF22A3QJZ6 481 aa21.89■■□□□ 1.09
RAB5C-209ENST00000552162 CCDC93Q567U6 631 aa21.89■■□□□ 1.09
RAB5C-209ENST00000552162 CLEC4GQ6UXB4 293 aa21.89■■□□□ 1.09
RAB5C-209ENST00000552162 ZNF652Q9Y2D9 606 aa21.89■■□□□ 1.09
RAB5C-209ENST00000552162 C7orf43Q8WVR3 580 aa21.88■■□□□ 1.09
RAB5C-209ENST00000552162 L3MBTL3Q96JM7 780 aaPredicted RBP21.88■■□□□ 1.09
RAB5C-209ENST00000552162 CNTNAP1P78357 1384 aa21.87■■□□□ 1.09
RAB5C-209ENST00000552162 PASKQ96RG2 1323 aa21.87■■□□□ 1.09
RAB5C-209ENST00000552162 NPR1P16066 1061 aa21.87■■□□□ 1.09
RAB5C-209ENST00000552162 LDHDQ86WU2 507 aa21.87■■□□□ 1.09
RAB5C-209ENST00000552162 SNRPA1P09661 255 aaKnown RBP21.86■■□□□ 1.09
RAB5C-209ENST00000552162 CFAP53Q96M91 514 aa21.86■■□□□ 1.09
RAB5C-209ENST00000552162 TAF1DQ9H5J8 278 aaPredicted RBP21.86■■□□□ 1.09
RAB5C-209ENST00000552162 FKBP4Q02790 459 aaKnown RBP eCLIP21.85■■□□□ 1.09
RAB5C-209ENST00000552162 ZNF541Q9H0D2 1346 aa21.84■■□□□ 1.09
RAB5C-209ENST00000552162 KLRG2A4D1S0 409 aaPredicted RBP21.84■■□□□ 1.09
RAB5C-209ENST00000552162 MCM10Q7L590 875 aa21.84■■□□□ 1.09
RAB5C-209ENST00000552162 RTF1Q92541 710 aaKnown RBP21.84■■□□□ 1.09
RAB5C-209ENST00000552162 ZNF277Q9NRM2 450 aaPredicted RBP21.84■■□□□ 1.09
RAB5C-209ENST00000552162 NIP7Q9Y221 180 aaKnown RBP eCLIP21.84■■□□□ 1.09
RAB5C-209ENST00000552162 LAMB4A4D0S4 1761 aa21.84■■□□□ 1.09
RAB5C-209ENST00000552162 ADAMTSL1Q8N6G6 1762 aa21.84■■□□□ 1.09
RAB5C-209ENST00000552162 OLFM4Q6UX06 510 aa21.83■■□□□ 1.09
RAB5C-209ENST00000552162 TPTE2Q6XPS3 522 aa21.83■■□□□ 1.09
RAB5C-209ENST00000552162 NBPF26B4DH59 902 aa21.82■■□□□ 1.08
RAB5C-209ENST00000552162 RGL2O15211 777 aa21.82■■□□□ 1.08
RAB5C-209ENST00000552162 FOXN1O15353 648 aa21.82■■□□□ 1.08
RAB5C-209ENST00000552162 EAPPQ56P03 285 aaPredicted RBP21.82■■□□□ 1.08
RAB5C-209ENST00000552162 NBPF10Q6P3W6 841 aaKnown RBP21.82■■□□□ 1.08
RAB5C-209ENST00000552162 NBPF15Q8N660 670 aa21.82■■□□□ 1.08
RAB5C-209ENST00000552162 NUDCQ9Y266 331 aa21.82■■□□□ 1.08
RAB5C-209ENST00000552162 FAM177BA6PVY3 158 aa21.81■■□□□ 1.08
RAB5C-209ENST00000552162 RTKN2Q8IZC4 609 aa21.81■■□□□ 1.08
RAB5C-209ENST00000552162 HACL1Q9UJ83 578 aa21.81■■□□□ 1.08
RAB5C-209ENST00000552162 TMEM88BA6NKF7 163 aa21.8■■□□□ 1.08
RAB5C-209ENST00000552162 ITGBL1O95965 494 aaPredicted RBP21.8■■□□□ 1.08
RAB5C-209ENST00000552162 U2AF1L5P0DN76 240 aaPredicted RBP21.8■■□□□ 1.08
RAB5C-209ENST00000552162 U2AF1Q01081 240 aaKnown RBP eCLIP21.8■■□□□ 1.08
RAB5C-209ENST00000552162 DCTN1Q14203 1278 aa21.79■■□□□ 1.08
RAB5C-209ENST00000552162 RNF123Q5XPI4 1314 aa21.79■■□□□ 1.08
RAB5C-209ENST00000552162 EPHX2P34913 555 aa21.78■■□□□ 1.08
RAB5C-209ENST00000552162 IARSP41252 1262 aaKnown RBP21.78■■□□□ 1.08
RAB5C-209ENST00000552162 VEGFBP49765 207 aa21.78■■□□□ 1.08
RAB5C-209ENST00000552162 CLEC11AQ9Y240 323 aa21.78■■□□□ 1.08
RAB5C-209ENST00000552162 ALDH1B1P30837 517 aa21.77■■□□□ 1.08
RAB5C-209ENST00000552162 HLFQ16534 295 aa21.77■■□□□ 1.08
RAB5C-209ENST00000552162 AIDAQ96BJ3 306 aa21.77■■□□□ 1.08
RAB5C-209ENST00000552162 SNED1Q8TER0 1413 aa21.77■■□□□ 1.08
RAB5C-209ENST00000552162 FZD9O00144 591 aa21.76■■□□□ 1.07
RAB5C-209ENST00000552162 GTF2E1P29083 439 aaPredicted RBP21.76■■□□□ 1.07
RAB5C-209ENST00000552162 PNMA8AQ86V59 439 aaPredicted RBP21.76■■□□□ 1.07
RAB5C-209ENST00000552162 SYNE4Q8N205 404 aa21.76■■□□□ 1.07
RAB5C-209ENST00000552162 PRDM10Q9NQV6 1147 aa21.76■■□□□ 1.07
RAB5C-209ENST00000552162 NUP98P52948 1817 aa21.76■■□□□ 1.07
RAB5C-209ENST00000552162 ABCC12Q96J65 1359 aa21.75■■□□□ 1.07
RAB5C-209ENST00000552162 HTATSF1O43719 755 aaKnown RBP21.75■■□□□ 1.07
RAB5C-209ENST00000552162 CTCFP49711 727 aaPredicted RBP21.75■■□□□ 1.07
RAB5C-209ENST00000552162 KDM3BQ7LBC6 1761 aa21.74■■□□□ 1.07
RAB5C-209ENST00000552162 GPC2Q8N158 579 aa21.74■■□□□ 1.07
RAB5C-209ENST00000552162 PSMD1Q99460 953 aa21.74■■□□□ 1.07
RAB5C-209ENST00000552162 PPP2R1AP30153 589 aa21.73■■□□□ 1.07
RAB5C-209ENST00000552162 TAF7Q15545 349 aaPredicted RBP21.73■■□□□ 1.07
RAB5C-209ENST00000552162 CRY2Q49AN0 593 aa21.73■■□□□ 1.07
RAB5C-209ENST00000552162 MAP1SQ66K74 1059 aaPredicted RBP21.73■■□□□ 1.07
RAB5C-209ENST00000552162 CNTROBQ8N137 903 aa21.73■■□□□ 1.07
RAB5C-209ENST00000552162 JDP2Q8WYK2 163 aa21.73■■□□□ 1.07
RAB5C-209ENST00000552162 NYXQ9GZU5 481 aa21.73■■□□□ 1.07
RAB5C-209ENST00000552162 DLG5Q8TDM6 1919 aa21.72■■□□□ 1.07
RAB5C-209ENST00000552162 COL4A5P29400 1685 aa21.72■■□□□ 1.07
RAB5C-209ENST00000552162 NUTM1Q86Y26 1132 aa21.72■■□□□ 1.07
RAB5C-209ENST00000552162 MIS18AQ9NYP9 233 aa21.72■■□□□ 1.07
RAB5C-209ENST00000552162 RASSF10A6NK89 507 aa21.71■■□□□ 1.07
RAB5C-209ENST00000552162 NGEFQ8N5V2 710 aa21.71■■□□□ 1.07
RAB5C-209ENST00000552162 WBP1LQ9NX94 342 aa21.71■■□□□ 1.07
RAB5C-209ENST00000552162 LTBP1Q14766 1721 aa21.71■■□□□ 1.07
RAB5C-209ENST00000552162 RIC1Q4ADV7 1423 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms