RNA–Protein interactions for RNA: ENST00000552140.5

NPIPA3-203, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

TSL 5 BASIC

Gene NPIPA3, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-203ENST00000552140 RC3H1Q5TC82 1133 aaKnown RBP9.62□□□□□ -0.87
NPIPA3-203ENST00000552140 HDGFL2Q7Z4V5 671 aaPredicted RBP9.62□□□□□ -0.87
NPIPA3-203ENST00000552140 TTLL6Q8N841 843 aa9.62□□□□□ -0.87
NPIPA3-203ENST00000552140 SLC12A5Q9H2X9 1139 aa9.62□□□□□ -0.87
NPIPA3-203ENST00000552140 TAF1DQ9H5J8 278 aaPredicted RBP9.62□□□□□ -0.87
NPIPA3-203ENST00000552140 TM4SF1P30408 202 aa9.61□□□□□ -0.87
NPIPA3-203ENST00000552140 CYP4F22Q6NT55 531 aa9.61□□□□□ -0.87
NPIPA3-203ENST00000552140 CAPNS2Q96L46 248 aa9.61□□□□□ -0.87
NPIPA3-203ENST00000552140 GPR101Q96P66 508 aaPredicted RBP9.61□□□□□ -0.87
NPIPA3-203ENST00000552140 ARID3AQ99856 593 aa9.61□□□□□ -0.87
NPIPA3-203ENST00000552140 ZMYND15Q9H091 742 aa9.61□□□□□ -0.87
NPIPA3-203ENST00000552140 METRNQ9UJH8 293 aa9.61□□□□□ -0.87
NPIPA3-203ENST00000552140 STK24Q9Y6E0 443 aa9.61□□□□□ -0.87
NPIPA3-203ENST00000552140 POTEB2H3BUK9 544 aa9.6□□□□□ -0.87
NPIPA3-203ENST00000552140 RRS1Q15050 365 aaKnown RBP9.6□□□□□ -0.87
NPIPA3-203ENST00000552140 MAP1SQ66K74 1059 aaPredicted RBP9.6□□□□□ -0.87
NPIPA3-203ENST00000552140 C2CD5Q86YS7 1000 aa9.6□□□□□ -0.87
NPIPA3-203ENST00000552140 CNTROBQ8N137 903 aa9.6□□□□□ -0.87
NPIPA3-203ENST00000552140 SLC39A7Q92504 469 aa9.6□□□□□ -0.87
NPIPA3-203ENST00000552140 WDR70Q9NW82 654 aa9.6□□□□□ -0.87
NPIPA3-203ENST00000552140 PCDHB8Q9UN66 801 aa9.6□□□□□ -0.87
NPIPA3-203ENST00000552140 CNTNAP4Q9C0A0 1308 aa9.59□□□□□ -0.87
NPIPA3-203ENST00000552140 EDC4Q6P2E9 1401 aaKnown RBP9.59□□□□□ -0.87
NPIPA3-203ENST00000552140 IQCA1LA6NCM1 817 aa9.59□□□□□ -0.87
NPIPA3-203ENST00000552140 C21orf2O43822 256 aa9.59□□□□□ -0.87
NPIPA3-203ENST00000552140 AOC2O75106 756 aa9.59□□□□□ -0.87
NPIPA3-203ENST00000552140 C7P10643 843 aa9.59□□□□□ -0.87
NPIPA3-203ENST00000552140 FMR1Q06787 632 aaKnown RBP eCLIP9.59□□□□□ -0.87
NPIPA3-203ENST00000552140 COG3Q96JB2 828 aa9.59□□□□□ -0.87
NPIPA3-203ENST00000552140 USP42Q9H9J4 1324 aaKnown RBP9.58□□□□□ -0.88
NPIPA3-203ENST00000552140 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.58□□□□□ -0.88
NPIPA3-203ENST00000552140 ECE1P42892 770 aa9.58□□□□□ -0.88
NPIPA3-203ENST00000552140 HSP90AB2PQ58FF8 381 aa9.58□□□□□ -0.88
NPIPA3-203ENST00000552140 ZFP91Q96JP5 570 aaPredicted RBP9.58□□□□□ -0.88
NPIPA3-203ENST00000552140 KDRP35968 1356 aa9.58□□□□□ -0.88
NPIPA3-203ENST00000552140 H0YIN7 160 aa9.57□□□□□ -0.88
NPIPA3-203ENST00000552140 TMEM106CQ9BVX2 250 aa9.57□□□□□ -0.88
NPIPA3-203ENST00000552140 SPG7Q9UQ90 795 aa9.57□□□□□ -0.88
NPIPA3-203ENST00000552140 RAB3GAP2Q9H2M9 1393 aa9.57□□□□□ -0.88
NPIPA3-203ENST00000552140 CASP8AP2Q9UKL3 1982 aa9.57□□□□□ -0.88
NPIPA3-203ENST00000552140 A0A1W2PP64 1363 aa9.56□□□□□ -0.88
NPIPA3-203ENST00000552140 CHRM1P11229 460 aaPredicted RBP9.56□□□□□ -0.88
NPIPA3-203ENST00000552140 USPL1Q5W0Q7 1092 aa9.56□□□□□ -0.88
NPIPA3-203ENST00000552140 ZNF622Q969S3 477 aaKnown RBP eCLIP9.56□□□□□ -0.88
NPIPA3-203ENST00000552140 RSPH6AQ9H0K4 717 aa9.56□□□□□ -0.88
NPIPA3-203ENST00000552140 DDX21Q9NR30 783 aaKnown RBP eCLIP9.56□□□□□ -0.88
NPIPA3-203ENST00000552140 TERF2IPQ9NYB0 399 aa9.56□□□□□ -0.88
NPIPA3-203ENST00000552140 TRIM35Q9UPQ4 493 aa9.56□□□□□ -0.88
NPIPA3-203ENST00000552140 LTBP1Q14766 1721 aa9.56□□□□□ -0.88
NPIPA3-203ENST00000552140 SMG6Q86US8 1419 aaKnown RBP9.56□□□□□ -0.88
NPIPA3-203ENST00000552140 SERPINB2P05120 415 aa9.55□□□□□ -0.88
NPIPA3-203ENST00000552140 EPHX2P34913 555 aa9.55□□□□□ -0.88
NPIPA3-203ENST00000552140 CRKLP46109 303 aaKnown RBP9.55□□□□□ -0.88
NPIPA3-203ENST00000552140 NFIXQ14938 502 aa9.55□□□□□ -0.88
NPIPA3-203ENST00000552140 HABP4Q5JVS0 413 aaKnown RBP9.55□□□□□ -0.88
NPIPA3-203ENST00000552140 L3MBTL3Q96JM7 780 aaPredicted RBP9.55□□□□□ -0.88
NPIPA3-203ENST00000552140 C1orf115Q9H7X2 142 aa9.55□□□□□ -0.88
NPIPA3-203ENST00000552140 HACL1Q9UJ83 578 aa9.55□□□□□ -0.88
NPIPA3-203ENST00000552140 RTL1A6NKG5 1358 aa9.54□□□□□ -0.88
NPIPA3-203ENST00000552140 MYH14Q7Z406 1995 aaKnown RBP9.54□□□□□ -0.88
NPIPA3-203ENST00000552140 THSD7BQ9C0I4 1608 aa9.54□□□□□ -0.88
NPIPA3-203ENST00000552140 PTCD1O75127 700 aaKnown RBP9.54□□□□□ -0.88
NPIPA3-203ENST00000552140 PHKG2P15735 406 aa9.54□□□□□ -0.88
NPIPA3-203ENST00000552140 MAP2K2P36507 400 aa9.54□□□□□ -0.88
NPIPA3-203ENST00000552140 TAOK3Q9H2K8 898 aa9.54□□□□□ -0.88
NPIPA3-203ENST00000552140 CARMIL3Q8ND23 1372 aa9.53□□□□□ -0.88
NPIPA3-203ENST00000552140 DICER1Q9UPY3 1922 aaKnown RBP9.53□□□□□ -0.88
NPIPA3-203ENST00000552140 CA12O43570 354 aa9.53□□□□□ -0.88
NPIPA3-203ENST00000552140 ZPR1O75312 459 aa9.53□□□□□ -0.88
NPIPA3-203ENST00000552140 CST9Q5W186 159 aa9.53□□□□□ -0.88
NPIPA3-203ENST00000552140 IFNL2Q8IZJ0 200 aa9.53□□□□□ -0.88
NPIPA3-203ENST00000552140 COL5A3P25940 1745 aaPredicted RBP9.53□□□□□ -0.88
NPIPA3-203ENST00000552140 ZNF541Q9H0D2 1346 aa9.53□□□□□ -0.88
NPIPA3-203ENST00000552140 INSRP06213 1382 aa9.52□□□□□ -0.88
NPIPA3-203ENST00000552140 POTEFA5A3E0 1075 aa9.52□□□□□ -0.89
NPIPA3-203ENST00000552140 TRAF5O00463 557 aa9.52□□□□□ -0.89
NPIPA3-203ENST00000552140 INTS5Q6P9B9 1019 aaKnown RBP9.52□□□□□ -0.89
NPIPA3-203ENST00000552140 ZNF467Q7Z7K2 595 aaPredicted RBP9.52□□□□□ -0.89
NPIPA3-203ENST00000552140 PNMA8AQ86V59 439 aaPredicted RBP9.52□□□□□ -0.89
NPIPA3-203ENST00000552140 CCDC24Q8N4L8 307 aa9.52□□□□□ -0.89
NPIPA3-203ENST00000552140 GCC1Q96CN9 775 aa9.52□□□□□ -0.89
NPIPA3-203ENST00000552140 RYDENQ9NUL5 291 aaKnown RBP9.52□□□□□ -0.89
NPIPA3-203ENST00000552140 ADAMTSL1Q8N6G6 1762 aa9.52□□□□□ -0.89
NPIPA3-203ENST00000552140 DLEC1Q9Y238 1755 aa9.52□□□□□ -0.89
NPIPA3-203ENST00000552140 LTBP3Q9NS15 1303 aa9.52□□□□□ -0.89
NPIPA3-203ENST00000552140 SCN4AP35499 1836 aa9.52□□□□□ -0.89
NPIPA3-203ENST00000552140 AFDNP55196 1824 aaKnown RBP9.52□□□□□ -0.89
NPIPA3-203ENST00000552140 DLL1O00548 723 aa9.51□□□□□ -0.89
NPIPA3-203ENST00000552140 SEMA3EO15041 775 aa9.51□□□□□ -0.89
NPIPA3-203ENST00000552140 CIAPIN1Q6FI81 312 aa9.51□□□□□ -0.89
NPIPA3-203ENST00000552140 GGNBP2Q9H3C7 697 aa9.51□□□□□ -0.89
NPIPA3-203ENST00000552140 TLL2Q9Y6L7 1015 aa9.51□□□□□ -0.89
NPIPA3-203ENST00000552140 RNF123Q5XPI4 1314 aa9.51□□□□□ -0.89
NPIPA3-203ENST00000552140 FER1L6Q2WGJ9 1857 aa9.51□□□□□ -0.89
NPIPA3-203ENST00000552140 BICDL1Q6ZP65 573 aa9.5□□□□□ -0.89
NPIPA3-203ENST00000552140 NBPF15Q8N660 670 aa9.5□□□□□ -0.89
NPIPA3-203ENST00000552140 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
NPIPA3-203ENST00000552140 COLQQ9Y215 455 aaPredicted RBP9.5□□□□□ -0.89
NPIPA3-203ENST00000552140 ZNF831Q5JPB2 1677 aa9.49□□□□□ -0.89
NPIPA3-203ENST00000552140 ERVV-2B6SEH9 535 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms