RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 BEGAINQ9BUH8 593 aa20.72■□□□□ 0.91
BRF1-220ENST00000552127 ZBTB1Q9Y2K1 713 aa20.72■□□□□ 0.91
BRF1-220ENST00000552127 SIPA1L3O60292 1781 aaPredicted RBP20.72■□□□□ 0.91
BRF1-220ENST00000552127 AKAP4Q5JQC9 854 aa20.71■□□□□ 0.91
BRF1-220ENST00000552127 MAP1SQ66K74 1059 aaPredicted RBP20.71■□□□□ 0.91
BRF1-220ENST00000552127 BRIP1Q9BX63 1249 aa20.71■□□□□ 0.91
BRF1-220ENST00000552127 PDZRN3Q9UPQ7 1066 aa20.71■□□□□ 0.91
BRF1-220ENST00000552127 UBR2Q8IWV8 1755 aa20.7■□□□□ 0.9
BRF1-220ENST00000552127 CCDC24Q8N4L8 307 aa20.7■□□□□ 0.9
BRF1-220ENST00000552127 HACL1Q9UJ83 578 aa20.7■□□□□ 0.9
BRF1-220ENST00000552127 U2SURPO15042 1029 aaKnown RBP20.69■□□□□ 0.9
BRF1-220ENST00000552127 EPHX2P34913 555 aa20.69■□□□□ 0.9
BRF1-220ENST00000552127 CFAP53Q96M91 514 aa20.69■□□□□ 0.9
BRF1-220ENST00000552127 TSKSQ9UJT2 592 aa20.69■□□□□ 0.9
BRF1-220ENST00000552127 MCOLN1Q9GZU1 580 aa20.68■□□□□ 0.9
BRF1-220ENST00000552127 ZNF541Q9H0D2 1346 aa20.68■□□□□ 0.9
BRF1-220ENST00000552127 ARFGEF2Q9Y6D5 1785 aa20.67■□□□□ 0.9
BRF1-220ENST00000552127 PPP2R1AP30153 589 aa20.67■□□□□ 0.9
BRF1-220ENST00000552127 PRPF40BQ6NWY9 871 aaKnown RBP20.67■□□□□ 0.9
BRF1-220ENST00000552127 PAXIP1Q6ZW49 1069 aaPredicted RBP20.67■□□□□ 0.9
BRF1-220ENST00000552127 PNMA8AQ86V59 439 aaPredicted RBP20.67■□□□□ 0.9
BRF1-220ENST00000552127 CAPNS2Q96L46 248 aa20.67■□□□□ 0.9
BRF1-220ENST00000552127 GRM1Q13255 1194 aa20.66■□□□□ 0.9
BRF1-220ENST00000552127 MTHFSDQ2M296 383 aaKnown RBP20.66■□□□□ 0.9
BRF1-220ENST00000552127 SOGA3Q5TF21 947 aa20.66■□□□□ 0.9
BRF1-220ENST00000552127 TBC1D9BQ66K14 1250 aa20.66■□□□□ 0.9
BRF1-220ENST00000552127 PRR5LQ6MZQ0 368 aa20.66■□□□□ 0.9
BRF1-220ENST00000552127 CNKSR1Q969H4 720 aa20.66■□□□□ 0.9
BRF1-220ENST00000552127 GPR101Q96P66 508 aaPredicted RBP20.66■□□□□ 0.9
BRF1-220ENST00000552127 LTBP1Q14766 1721 aa20.65■□□□□ 0.9
BRF1-220ENST00000552127 ECE1P42892 770 aa20.65■□□□□ 0.9
BRF1-220ENST00000552127 CYP4F22Q6NT55 531 aa20.65■□□□□ 0.9
BRF1-220ENST00000552127 DDX21Q9NR30 783 aaKnown RBP eCLIP20.65■□□□□ 0.9
BRF1-220ENST00000552127 RNF123Q5XPI4 1314 aa20.64■□□□□ 0.89
BRF1-220ENST00000552127 CANXP27824 592 aaKnown RBP20.64■□□□□ 0.89
BRF1-220ENST00000552127 CASP8AP2Q9UKL3 1982 aa20.64■□□□□ 0.89
BRF1-220ENST00000552127 RNMTO43148 476 aaKnown RBP20.63■□□□□ 0.89
BRF1-220ENST00000552127 SLC39A6Q13433 755 aa20.63■□□□□ 0.89
BRF1-220ENST00000552127 STYK1Q6J9G0 422 aa20.63■□□□□ 0.89
BRF1-220ENST00000552127 SLC52A2Q9HAB3 445 aa20.63■□□□□ 0.89
BRF1-220ENST00000552127 LGR6Q9HBX8 967 aa20.63■□□□□ 0.89
BRF1-220ENST00000552127 SRGNP10124 158 aa20.62■□□□□ 0.89
BRF1-220ENST00000552127 DLG5Q8TDM6 1919 aa20.62■□□□□ 0.89
BRF1-220ENST00000552127 FMR1Q06787 632 aaKnown RBP eCLIP20.61■□□□□ 0.89
BRF1-220ENST00000552127 NUDCQ9Y266 331 aa20.61■□□□□ 0.89
BRF1-220ENST00000552127 SCN7AQ01118 1682 aa20.61■□□□□ 0.89
BRF1-220ENST00000552127 EIF5P55010 431 aaKnown RBP20.6■□□□□ 0.89
BRF1-220ENST00000552127 GAS2L2Q8NHY3 880 aa20.6■□□□□ 0.89
BRF1-220ENST00000552127 C7orf43Q8WVR3 580 aa20.6■□□□□ 0.89
BRF1-220ENST00000552127 MASTLQ96GX5 879 aa20.6■□□□□ 0.89
BRF1-220ENST00000552127 RSPH6AQ9H0K4 717 aa20.6■□□□□ 0.89
BRF1-220ENST00000552127 ZNF277Q9NRM2 450 aaPredicted RBP20.6■□□□□ 0.89
BRF1-220ENST00000552127 AOC2O75106 756 aa20.59■□□□□ 0.89
BRF1-220ENST00000552127 DGKZQ13574 1117 aa20.59■□□□□ 0.89
BRF1-220ENST00000552127 CCDC93Q567U6 631 aa20.59■□□□□ 0.89
BRF1-220ENST00000552127 TRPM7Q96QT4 1865 aa20.58■□□□□ 0.89
BRF1-220ENST00000552127 A0A087WZG4 1122 aa20.58■□□□□ 0.89
BRF1-220ENST00000552127 PRKAR2BP31323 418 aa20.58■□□□□ 0.89
BRF1-220ENST00000552127 MAP2K2P36507 400 aa20.58■□□□□ 0.89
BRF1-220ENST00000552127 FKBP4Q02790 459 aaKnown RBP eCLIP20.58■□□□□ 0.89
BRF1-220ENST00000552127 CNBD1Q8NA66 436 aa20.58■□□□□ 0.89
BRF1-220ENST00000552127 VSIG10Q8N0Z9 540 aa20.57■□□□□ 0.88
BRF1-220ENST00000552127 GNAT3A8MTJ3 354 aa20.56■□□□□ 0.88
BRF1-220ENST00000552127 FZD9O00144 591 aa20.56■□□□□ 0.88
BRF1-220ENST00000552127 NPHP1O15259 732 aa20.56■□□□□ 0.88
BRF1-220ENST00000552127 U2AF1L5P0DN76 240 aaPredicted RBP20.56■□□□□ 0.88
BRF1-220ENST00000552127 U2AF1Q01081 240 aaKnown RBP eCLIP20.56■□□□□ 0.88
BRF1-220ENST00000552127 CST9Q5W186 159 aa20.56■□□□□ 0.88
BRF1-220ENST00000552127 GPC2Q8N158 579 aa20.56■□□□□ 0.88
BRF1-220ENST00000552127 TBC1D2BQ9UPU7 963 aa20.56■□□□□ 0.88
BRF1-220ENST00000552127 CA12O43570 354 aa20.55■□□□□ 0.88
BRF1-220ENST00000552127 ST5P78524 1137 aa20.55■□□□□ 0.88
BRF1-220ENST00000552127 PHACTR3Q96KR7 559 aa20.55■□□□□ 0.88
BRF1-220ENST00000552127 TLL2Q9Y6L7 1015 aa20.55■□□□□ 0.88
BRF1-220ENST00000552127 OLFM4Q6UX06 510 aa20.54■□□□□ 0.88
BRF1-220ENST00000552127 SETDB2Q96T68 719 aa20.54■□□□□ 0.88
BRF1-220ENST00000552127 TRAF5O00463 557 aa20.53■□□□□ 0.88
BRF1-220ENST00000552127 ZNF330Q9Y3S2 320 aaPredicted RBP20.53■□□□□ 0.88
BRF1-220ENST00000552127 CEMIPQ8WUJ3 1361 aa20.53■□□□□ 0.88
BRF1-220ENST00000552127 STARD3NLO95772 234 aa20.52■□□□□ 0.88
BRF1-220ENST00000552127 IARSP41252 1262 aaKnown RBP20.52■□□□□ 0.88
BRF1-220ENST00000552127 TEFQ10587 303 aa20.52■□□□□ 0.88
BRF1-220ENST00000552127 PRPF38BQ5VTL8 546 aaKnown RBP20.52■□□□□ 0.88
BRF1-220ENST00000552127 IL17REQ8NFR9 667 aa20.52■□□□□ 0.88
BRF1-220ENST00000552127 SOX10P56693 466 aa20.5■□□□□ 0.87
BRF1-220ENST00000552127 RTKN2Q8IZC4 609 aa20.5■□□□□ 0.87
BRF1-220ENST00000552127 NPR1P16066 1061 aa20.49■□□□□ 0.87
BRF1-220ENST00000552127 LMOD1P29536 600 aaPredicted RBP20.49■□□□□ 0.87
BRF1-220ENST00000552127 BRPF1P55201 1214 aaPredicted RBP20.49■□□□□ 0.87
BRF1-220ENST00000552127 DDX10Q13206 875 aaKnown RBP20.49■□□□□ 0.87
BRF1-220ENST00000552127 TTC5Q8N0Z6 440 aa20.49■□□□□ 0.87
BRF1-220ENST00000552127 SYNE4Q8N205 404 aa20.49■□□□□ 0.87
BRF1-220ENST00000552127 GJA3Q9Y6H8 435 aa20.49■□□□□ 0.87
BRF1-220ENST00000552127 EPS15P42566 896 aa20.48■□□□□ 0.87
BRF1-220ENST00000552127 RALBP1Q15311 655 aa20.48■□□□□ 0.87
BRF1-220ENST00000552127 SAPCD2Q86UD0 394 aa20.48■□□□□ 0.87
BRF1-220ENST00000552127 BCORQ6W2J9 1755 aa20.47■□□□□ 0.87
BRF1-220ENST00000552127 KDM3BQ7LBC6 1761 aa20.47■□□□□ 0.87
BRF1-220ENST00000552127 CAMTA2O94983 1202 aa20.47■□□□□ 0.87
BRF1-220ENST00000552127 SCNN1DP51172 638 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms